RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 LRTOMTQ8WZ04 291 aa4.94□□□□□ -1.62
SCAF11-214ENST00000550893 DNASE2BQ8WZ79 361 aa4.94□□□□□ -1.62
SCAF11-214ENST00000550893 CFAP57Q96MR6 1250 aa4.94□□□□□ -1.62
SCAF11-214ENST00000550893 SERPINB11Q96P15 392 aa4.94□□□□□ -1.62
SCAF11-214ENST00000550893 SNX18Q96RF0 628 aa4.94□□□□□ -1.62
SCAF11-214ENST00000550893 BPIFA3Q9BQP9 254 aa4.94□□□□□ -1.62
SCAF11-214ENST00000550893 STK33Q9BYT3 514 aa4.94□□□□□ -1.62
SCAF11-214ENST00000550893 SLC2A11Q9BYW1 496 aa4.94□□□□□ -1.62
SCAF11-214ENST00000550893 TRIM5Q9C035 493 aa4.94□□□□□ -1.62
SCAF11-214ENST00000550893 CIPCQ9C0C6 399 aa4.94□□□□□ -1.62
SCAF11-214ENST00000550893 RSPH9Q9H1X1 276 aaPredicted RBP4.94□□□□□ -1.62
SCAF11-214ENST00000550893 C6orf106Q9H6K1 298 aaPredicted RBP4.94□□□□□ -1.62
SCAF11-214ENST00000550893 IL21RQ9HBE5 538 aa4.94□□□□□ -1.62
SCAF11-214ENST00000550893 POPDC2Q9HBU9 364 aa4.94□□□□□ -1.62
SCAF11-214ENST00000550893 NLRC4Q9NPP4 1024 aa4.94□□□□□ -1.62
SCAF11-214ENST00000550893 FAM207AQ9NSI2 230 aaPredicted RBP4.94□□□□□ -1.62
SCAF11-214ENST00000550893 OLA1Q9NTK5 396 aaKnown RBP4.94□□□□□ -1.62
SCAF11-214ENST00000550893 WDR35Q9P2L0 1181 aa4.94□□□□□ -1.62
SCAF11-214ENST00000550893 HOOK1Q9UJC3 728 aaKnown RBP4.94□□□□□ -1.62
SCAF11-214ENST00000550893 LSM7Q9UK45 103 aaKnown RBP4.94□□□□□ -1.62
SCAF11-214ENST00000550893 SLC8A2Q9UPR5 921 aa4.94□□□□□ -1.62
SCAF11-214ENST00000550893 DRG1Q9Y295 367 aaKnown RBP4.94□□□□□ -1.62
SCAF11-214ENST00000550893 PCDHGA5Q9Y5G8 931 aa4.94□□□□□ -1.62
SCAF11-214ENST00000550893 FAM208BQ5VWN6 2430 aa4.94□□□□□ -1.62
SCAF11-214ENST00000550893 ACACAQ13085 2346 aa4.94□□□□□ -1.62
SCAF11-214ENST00000550893 CACNA1GO43497 2377 aa4.93□□□□□ -1.62
SCAF11-214ENST00000550893 A0A0D9SEW6 157 aa4.93□□□□□ -1.62
SCAF11-214ENST00000550893 LOC102723971A0A1B0GUV8 181 aa4.93□□□□□ -1.62
SCAF11-214ENST00000550893 VSTM5A8MXK1 200 aa4.93□□□□□ -1.62
SCAF11-214ENST00000550893 K7ERQ8 282 aa4.93□□□□□ -1.62
SCAF11-214ENST00000550893 PSMD9O00233 223 aa4.93□□□□□ -1.62
SCAF11-214ENST00000550893 CCP110O43303 1012 aa4.93□□□□□ -1.62
SCAF11-214ENST00000550893 RGS10O43665 173 aa4.93□□□□□ -1.62
SCAF11-214ENST00000550893 CBFA2T3O75081 653 aa4.93□□□□□ -1.62
SCAF11-214ENST00000550893 ATG13O75143 517 aa4.93□□□□□ -1.62
SCAF11-214ENST00000550893 PMPCBO75439 489 aa4.93□□□□□ -1.62
SCAF11-214ENST00000550893 MOCS2O96007 188 aaPredicted RBP4.93□□□□□ -1.62
SCAF11-214ENST00000550893 PLEKP08567 350 aaPredicted RBP4.93□□□□□ -1.62
SCAF11-214ENST00000550893 PDGFRAP16234 1089 aa4.93□□□□□ -1.62
SCAF11-214ENST00000550893 UQCRC1P31930 480 aa4.93□□□□□ -1.62
SCAF11-214ENST00000550893 GKP32189 559 aa4.93□□□□□ -1.62
SCAF11-214ENST00000550893 MATKP42679 507 aa4.93□□□□□ -1.62
SCAF11-214ENST00000550893 POLR2FP61218 127 aaKnown RBP4.93□□□□□ -1.62
SCAF11-214ENST00000550893 RPS16P62249 146 aaKnown RBP4.93□□□□□ -1.62
SCAF11-214ENST00000550893 RPL7AP62424 266 aaKnown RBP4.93□□□□□ -1.62
SCAF11-214ENST00000550893 ARF5P84085 180 aa4.93□□□□□ -1.62
SCAF11-214ENST00000550893 PSG6Q00889 435 aa4.93□□□□□ -1.62
SCAF11-214ENST00000550893 RAPGEF1Q13905 1077 aa4.93□□□□□ -1.62
SCAF11-214ENST00000550893 IHHQ14623 411 aa4.93□□□□□ -1.62
SCAF11-214ENST00000550893 GRM3Q14832 879 aa4.93□□□□□ -1.62
SCAF11-214ENST00000550893 STX1AQ16623 288 aa4.93□□□□□ -1.62
SCAF11-214ENST00000550893 CA9Q16790 459 aa4.93□□□□□ -1.62
SCAF11-214ENST00000550893 HNRNPA1L2Q32P51 320 aaKnown RBP4.93□□□□□ -1.62
SCAF11-214ENST00000550893 MPPE1Q53F39 396 aa4.93□□□□□ -1.62
SCAF11-214ENST00000550893 TPRG1LQ5T0D9 272 aa4.93□□□□□ -1.62
SCAF11-214ENST00000550893 CCDC183Q5T5S1 534 aa4.93□□□□□ -1.62
SCAF11-214ENST00000550893 DAB2IPQ5VWQ8 1189 aa4.93□□□□□ -1.62
SCAF11-214ENST00000550893 NUGGCQ68CJ6 796 aa4.93□□□□□ -1.62
SCAF11-214ENST00000550893 TXNRD3NBQ6F5E7 133 aa4.93□□□□□ -1.62
SCAF11-214ENST00000550893 ZNF425Q6IV72 752 aa4.93□□□□□ -1.62
SCAF11-214ENST00000550893 SLC18B1Q6NT16 456 aa4.93□□□□□ -1.62
SCAF11-214ENST00000550893 RSRC2Q7L4I2 434 aaKnown RBP4.93□□□□□ -1.62
SCAF11-214ENST00000550893 ARCQ7LC44 396 aa4.93□□□□□ -1.62
SCAF11-214ENST00000550893 CHST15Q7LFX5 561 aaPredicted RBP4.93□□□□□ -1.62
SCAF11-214ENST00000550893 PHLDB2Q86SQ0 1253 aa4.93□□□□□ -1.62
SCAF11-214ENST00000550893 PHF13Q86YI8 300 aaPredicted RBP4.93□□□□□ -1.62
SCAF11-214ENST00000550893 LGI2Q8N0V4 545 aa4.93□□□□□ -1.62
SCAF11-214ENST00000550893 PYROXD2Q8N2H3 581 aa4.93□□□□□ -1.62
SCAF11-214ENST00000550893 SIRT6Q8N6T7 355 aa4.93□□□□□ -1.62
SCAF11-214ENST00000550893 HJURPQ8NCD3 748 aaPredicted RBP4.93□□□□□ -1.62
SCAF11-214ENST00000550893 OR2T3Q8NH03 318 aa4.93□□□□□ -1.62
SCAF11-214ENST00000550893 SCARB1Q8WTV0 552 aa4.93□□□□□ -1.62
SCAF11-214ENST00000550893 FAM149B1Q96BN6 582 aa4.93□□□□□ -1.62
SCAF11-214ENST00000550893 C5orf34Q96MH7 638 aa4.93□□□□□ -1.62
SCAF11-214ENST00000550893 C11orf70Q9BRQ4 267 aa4.93□□□□□ -1.62
SCAF11-214ENST00000550893 EDEM2Q9BV94 578 aa4.93□□□□□ -1.62
SCAF11-214ENST00000550893 DCLK3Q9C098 648 aa4.93□□□□□ -1.62
SCAF11-214ENST00000550893 ITM2CQ9NQX7 267 aa4.93□□□□□ -1.62
SCAF11-214ENST00000550893 MPP6Q9NZW5 540 aa4.93□□□□□ -1.62
SCAF11-214ENST00000550893 AMFRQ9UKV5 643 aa4.93□□□□□ -1.62
SCAF11-214ENST00000550893 VANGL2Q9ULK5 521 aa4.93□□□□□ -1.62
SCAF11-214ENST00000550893 USP22Q9UPT9 525 aa4.93□□□□□ -1.62
SCAF11-214ENST00000550893 ERVW-1Q9UQF0 538 aa4.93□□□□□ -1.62
SCAF11-214ENST00000550893 ZNF510Q9Y2H8 683 aa4.93□□□□□ -1.62
SCAF11-214ENST00000550893 MFHAS1Q9Y4C4 1052 aa4.93□□□□□ -1.62
SCAF11-214ENST00000550893 TENM4Q6N022 2769 aa4.93□□□□□ -1.62
SCAF11-214ENST00000550893 ATRXP46100 2492 aa4.92□□□□□ -1.62
SCAF11-214ENST00000550893 A0A1B0GVM2 712 aa4.92□□□□□ -1.62
SCAF11-214ENST00000550893 A0A1W2PR77 199 aa4.92□□□□□ -1.62
SCAF11-214ENST00000550893 C4orf47A7E2U8 309 aa4.92□□□□□ -1.62
SCAF11-214ENST00000550893 POC1B-GALNT4F8VUJ3 575 aa4.92□□□□□ -1.62
SCAF11-214ENST00000550893 CES2O00748 559 aa4.92□□□□□ -1.62
SCAF11-214ENST00000550893 TPP1O14773 563 aa4.92□□□□□ -1.62
SCAF11-214ENST00000550893 CASC3O15234 703 aaKnown RBP4.92□□□□□ -1.62
SCAF11-214ENST00000550893 MID1O15344 667 aa4.92□□□□□ -1.62
SCAF11-214ENST00000550893 CD3EAPO15446 510 aaKnown RBP4.92□□□□□ -1.62
SCAF11-214ENST00000550893 LATO43561 262 aa4.92□□□□□ -1.62
SCAF11-214ENST00000550893 RRP9O43818 475 aaKnown RBP4.92□□□□□ -1.62
SCAF11-214ENST00000550893 KCNK5O95279 499 aa4.92□□□□□ -1.62
SCAF11-214ENST00000550893 LSM8O95777 96 aaKnown RBP4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms