RNA–Protein interactions for RNA: ENST00000550847.1

RAB3IP-214, Transcript of RAB3A interacting protein, humanhuman

TSL 3 BASIC

Gene RAB3IP, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-214ENST00000550847 NDUFS4O43181 175 aa4.47□□□□□ -1.69
RAB3IP-214ENST00000550847 TFPIP10646 304 aa4.47□□□□□ -1.69
RAB3IP-214ENST00000550847 KRT13P13646 458 aa4.47□□□□□ -1.69
RAB3IP-214ENST00000550847 ETS1P14921 441 aa4.47□□□□□ -1.69
RAB3IP-214ENST00000550847 NMBRP28336 390 aa4.47□□□□□ -1.69
RAB3IP-214ENST00000550847 DCTDP32321 178 aa4.47□□□□□ -1.69
RAB3IP-214ENST00000550847 GMPSP49915 693 aaPredicted RBP4.47□□□□□ -1.69
RAB3IP-214ENST00000550847 ASCL1P50553 236 aa4.47□□□□□ -1.69
RAB3IP-214ENST00000550847 METAP2P50579 478 aaKnown RBP eCLIP4.47□□□□□ -1.69
RAB3IP-214ENST00000550847 UCP2P55851 309 aa4.47□□□□□ -1.69
RAB3IP-214ENST00000550847 HMGN5P82970 282 aaKnown RBP4.47□□□□□ -1.69
RAB3IP-214ENST00000550847 CDK3Q00526 305 aa4.47□□□□□ -1.69
RAB3IP-214ENST00000550847 GFPT1Q06210 699 aaPredicted RBP4.47□□□□□ -1.69
RAB3IP-214ENST00000550847 FAM27E3Q08E93 113 aa4.47□□□□□ -1.69
RAB3IP-214ENST00000550847 PMPCAQ10713 525 aa4.47□□□□□ -1.69
RAB3IP-214ENST00000550847 GRIK2Q13002 908 aa4.47□□□□□ -1.69
RAB3IP-214ENST00000550847 NR1D2Q14995 579 aa4.47□□□□□ -1.69
RAB3IP-214ENST00000550847 FAM174BQ3ZCQ3 159 aa4.47□□□□□ -1.69
RAB3IP-214ENST00000550847 IQCCQ4KMZ1 466 aa4.47□□□□□ -1.69
RAB3IP-214ENST00000550847 SIGIRRQ6IA17 410 aa4.47□□□□□ -1.69
RAB3IP-214ENST00000550847 KIAA1161Q6NSJ0 714 aa4.47□□□□□ -1.69
RAB3IP-214ENST00000550847 ISLR2Q6UXK2 745 aa4.47□□□□□ -1.69
RAB3IP-214ENST00000550847 RBM43Q6ZSC3 357 aaKnown RBP4.47□□□□□ -1.69
RAB3IP-214ENST00000550847 C1orf186Q6ZWK4 172 aa4.47□□□□□ -1.69
RAB3IP-214ENST00000550847 MTSS1LQ765P7 747 aa4.47□□□□□ -1.69
RAB3IP-214ENST00000550847 TRAPPC11Q7Z392 1133 aa4.47□□□□□ -1.69
RAB3IP-214ENST00000550847 ARMC9Q7Z3E5 817 aa4.47□□□□□ -1.69
RAB3IP-214ENST00000550847 CTU1Q7Z7A3 348 aaKnown RBP4.47□□□□□ -1.69
RAB3IP-214ENST00000550847 CCDC190Q86UF4 302 aa4.47□□□□□ -1.69
RAB3IP-214ENST00000550847 ZNF410Q86VK4 478 aa4.47□□□□□ -1.69
RAB3IP-214ENST00000550847 SFTPA2Q8IWL1 248 aa4.47□□□□□ -1.69
RAB3IP-214ENST00000550847 FBXW8Q8N3Y1 598 aa4.47□□□□□ -1.69
RAB3IP-214ENST00000550847 CMASQ8NFW8 434 aaPredicted RBP4.47□□□□□ -1.69
RAB3IP-214ENST00000550847 NCOA7Q8NI08 942 aa4.47□□□□□ -1.69
RAB3IP-214ENST00000550847 SLAMF9Q96A28 289 aa4.47□□□□□ -1.69
RAB3IP-214ENST00000550847 BSCL2Q96G97 398 aaPredicted RBP4.47□□□□□ -1.69
RAB3IP-214ENST00000550847 URB1-AS1Q96HZ7 61 aa4.47□□□□□ -1.69
RAB3IP-214ENST00000550847 FEVQ99581 238 aa4.47□□□□□ -1.69
RAB3IP-214ENST00000550847 NTPCRQ9BSD7 190 aaKnown RBP4.47□□□□□ -1.69
RAB3IP-214ENST00000550847 TMEM39BQ9GZU3 492 aa4.47□□□□□ -1.69
RAB3IP-214ENST00000550847 WNT5BQ9H1J7 359 aa4.47□□□□□ -1.69
RAB3IP-214ENST00000550847 P2RY12Q9H244 342 aa4.47□□□□□ -1.69
RAB3IP-214ENST00000550847 DPH5Q9H2P9 285 aa4.47□□□□□ -1.69
RAB3IP-214ENST00000550847 SRD5A3Q9H8P0 318 aa4.47□□□□□ -1.69
RAB3IP-214ENST00000550847 RNPEPL1Q9HAU8 725 aa4.47□□□□□ -1.69
RAB3IP-214ENST00000550847 GPR108Q9NPR9 543 aa4.47□□□□□ -1.69
RAB3IP-214ENST00000550847 SLC35D1Q9NTN3 355 aa4.47□□□□□ -1.69
RAB3IP-214ENST00000550847 RNF146Q9NTX7 359 aa4.47□□□□□ -1.69
RAB3IP-214ENST00000550847 ACSS1Q9NUB1 689 aaPredicted RBP4.47□□□□□ -1.69
RAB3IP-214ENST00000550847 TMEM161AQ9NX61 479 aa4.47□□□□□ -1.69
RAB3IP-214ENST00000550847 SPASTQ9UBP0 616 aa4.47□□□□□ -1.69
RAB3IP-214ENST00000550847 GMEB2Q9UKD1 530 aa4.47□□□□□ -1.69
RAB3IP-214ENST00000550847 KIF3AQ9Y496 699 aa4.47□□□□□ -1.69
RAB3IP-214ENST00000550847 TMEM184BQ9Y519 407 aaPredicted RBP4.47□□□□□ -1.69
RAB3IP-214ENST00000550847 DHX29Q7Z478 1369 aaKnown RBP4.47□□□□□ -1.69
RAB3IP-214ENST00000550847 FAM205AQ6ZU69 1335 aa4.46□□□□□ -1.69
RAB3IP-214ENST00000550847 FEZF1A0PJY2 475 aa4.46□□□□□ -1.7
RAB3IP-214ENST00000550847 ELOVL7A1L3X0 281 aa4.46□□□□□ -1.7
RAB3IP-214ENST00000550847 M0QZ24 198 aa4.46□□□□□ -1.7
RAB3IP-214ENST00000550847 HSPB6O14558 160 aa4.46□□□□□ -1.7
RAB3IP-214ENST00000550847 RASGRF2O14827 1237 aa4.46□□□□□ -1.7
RAB3IP-214ENST00000550847 NME6O75414 186 aaPredicted RBP4.46□□□□□ -1.7
RAB3IP-214ENST00000550847 RGS11O94810 467 aa4.46□□□□□ -1.7
RAB3IP-214ENST00000550847 PGLSO95336 258 aa4.46□□□□□ -1.7
RAB3IP-214ENST00000550847 MMP3P08254 477 aa4.46□□□□□ -1.7
RAB3IP-214ENST00000550847 PLA2G4BP0C869 781 aa4.46□□□□□ -1.7
RAB3IP-214ENST00000550847 CCDC192P0DO97 292 aa4.46□□□□□ -1.7
RAB3IP-214ENST00000550847 MAOAP21397 527 aa4.46□□□□□ -1.7
RAB3IP-214ENST00000550847 AZGP1P25311 298 aaKnown RBP4.46□□□□□ -1.7
RAB3IP-214ENST00000550847 RPA1P27694 616 aa4.46□□□□□ -1.7
RAB3IP-214ENST00000550847 ASMTP46597 345 aa4.46□□□□□ -1.7
RAB3IP-214ENST00000550847 RFX5P48382 616 aaPredicted RBP4.46□□□□□ -1.7
RAB3IP-214ENST00000550847 RAD23BP54727 409 aa4.46□□□□□ -1.7
RAB3IP-214ENST00000550847 PRKCZQ05513 592 aa4.46□□□□□ -1.7
RAB3IP-214ENST00000550847 TNK1Q13470 666 aa4.46□□□□□ -1.7
RAB3IP-214ENST00000550847 LPIN1Q14693 890 aa4.46□□□□□ -1.7
RAB3IP-214ENST00000550847 MVPQ14764 893 aaKnown RBP4.46□□□□□ -1.7
RAB3IP-214ENST00000550847 ALG10Q5BKT4 473 aa4.46□□□□□ -1.7
RAB3IP-214ENST00000550847 ALG10BQ5I7T1 473 aa4.46□□□□□ -1.7
RAB3IP-214ENST00000550847 SPOUT1Q5T280 376 aaKnown RBP4.46□□□□□ -1.7
RAB3IP-214ENST00000550847 PRAMEF8Q5VWM4 474 aa4.46□□□□□ -1.7
RAB3IP-214ENST00000550847 CES4AQ5XG92 561 aa4.46□□□□□ -1.7
RAB3IP-214ENST00000550847 GGNBP1Q5YKI7 109 aa4.46□□□□□ -1.7
RAB3IP-214ENST00000550847 NSUN5P2Q63ZY6 315 aa4.46□□□□□ -1.7
RAB3IP-214ENST00000550847 ANKRD54Q6NXT1 300 aa4.46□□□□□ -1.7
RAB3IP-214ENST00000550847 METTL2BQ6P1Q9 378 aaKnown RBP4.46□□□□□ -1.7
RAB3IP-214ENST00000550847 BRAT1Q6PJG6 821 aa4.46□□□□□ -1.7
RAB3IP-214ENST00000550847 CCDC83Q8IWF9 413 aa4.46□□□□□ -1.7
RAB3IP-214ENST00000550847 SPATA6LQ8N4H0 392 aa4.46□□□□□ -1.7
RAB3IP-214ENST00000550847 OR52E1Q8NGJ3 308 aa4.46□□□□□ -1.7
RAB3IP-214ENST00000550847 RNASE8Q8TDE3 154 aaKnown RBP4.46□□□□□ -1.7
RAB3IP-214ENST00000550847 OIT3Q8WWZ8 545 aa4.46□□□□□ -1.7
RAB3IP-214ENST00000550847 RIT1Q92963 219 aa4.46□□□□□ -1.7
RAB3IP-214ENST00000550847 SPDL1Q96EA4 605 aa4.46□□□□□ -1.7
RAB3IP-214ENST00000550847 CDCA5Q96FF9 252 aa4.46□□□□□ -1.7
RAB3IP-214ENST00000550847 OTUB1Q96FW1 271 aaPredicted RBP4.46□□□□□ -1.7
RAB3IP-214ENST00000550847 METTL2AQ96IZ6 378 aaKnown RBP4.46□□□□□ -1.7
RAB3IP-214ENST00000550847 KLHL5Q96PQ7 755 aa4.46□□□□□ -1.7
RAB3IP-214ENST00000550847 TXN2Q99757 166 aa4.46□□□□□ -1.7
RAB3IP-214ENST00000550847 CPNE1Q99829 537 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms