RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 PAF1Q8N7H5 531 aa5.72□□□□□ -1.49
SCAF11-213ENST00000550629 TMEM105Q8N8V8 129 aa5.72□□□□□ -1.49
SCAF11-213ENST00000550629 NAT8LQ8N9F0 302 aa5.72□□□□□ -1.49
SCAF11-213ENST00000550629 MDGA1Q8NFP4 955 aa5.72□□□□□ -1.49
SCAF11-213ENST00000550629 IPMKQ8NFU5 416 aa5.72□□□□□ -1.49
SCAF11-213ENST00000550629 HMGB4Q8WW32 186 aa5.72□□□□□ -1.49
SCAF11-213ENST00000550629 PIH1D2Q8WWB5 315 aa5.72□□□□□ -1.49
SCAF11-213ENST00000550629 CPT1BQ92523 772 aa5.72□□□□□ -1.49
SCAF11-213ENST00000550629 NELL1Q92832 810 aa5.72□□□□□ -1.49
SCAF11-213ENST00000550629 PEX13Q92968 403 aa5.72□□□□□ -1.49
SCAF11-213ENST00000550629 NSMCE3Q96MG7 304 aa5.72□□□□□ -1.49
SCAF11-213ENST00000550629 OMDQ99983 421 aa5.72□□□□□ -1.49
SCAF11-213ENST00000550629 TBL1YQ9BQ87 522 aa5.72□□□□□ -1.49
SCAF11-213ENST00000550629 NAT9Q9BTE0 207 aa5.72□□□□□ -1.49
SCAF11-213ENST00000550629 LRRC1Q9BTT6 524 aa5.72□□□□□ -1.49
SCAF11-213ENST00000550629 GPR87Q9BY21 358 aa5.72□□□□□ -1.49
SCAF11-213ENST00000550629 IL22Q9GZX6 179 aa5.72□□□□□ -1.49
SCAF11-213ENST00000550629 CDH19Q9H159 772 aa5.72□□□□□ -1.49
SCAF11-213ENST00000550629 EPHX3Q9H6B9 360 aa5.72□□□□□ -1.49
SCAF11-213ENST00000550629 CAAP1Q9H8G2 361 aa5.72□□□□□ -1.49
SCAF11-213ENST00000550629 SGK2Q9HBY8 427 aa5.72□□□□□ -1.49
SCAF11-213ENST00000550629 PREBQ9HCU5 417 aa5.72□□□□□ -1.49
SCAF11-213ENST00000550629 CASS4Q9NQ75 786 aa5.72□□□□□ -1.49
SCAF11-213ENST00000550629 FAM114A2Q9NRY5 505 aa5.72□□□□□ -1.49
SCAF11-213ENST00000550629 FBXL12Q9NXK8 326 aa5.72□□□□□ -1.49
SCAF11-213ENST00000550629 KCTD5Q9NXV2 234 aa5.72□□□□□ -1.49
SCAF11-213ENST00000550629 BCCIPQ9P287 314 aaKnown RBP eCLIP5.72□□□□□ -1.49
SCAF11-213ENST00000550629 C11orf21Q9P2W6 132 aa5.72□□□□□ -1.49
SCAF11-213ENST00000550629 ANAPC5Q9UJX4 755 aa5.72□□□□□ -1.49
SCAF11-213ENST00000550629 CKAP5Q14008 2032 aa5.72□□□□□ -1.49
SCAF11-213ENST00000550629 TECTAO75443 2155 aa5.72□□□□□ -1.49
SCAF11-213ENST00000550629 CUL9Q8IWT3 2517 aa5.71□□□□□ -1.5
SCAF11-213ENST00000550629 NUP205Q92621 2012 aa5.71□□□□□ -1.5
SCAF11-213ENST00000550629 LRRC72A6NJI9 287 aa5.71□□□□□ -1.5
SCAF11-213ENST00000550629 C10orf142B7Z368 130 aa5.71□□□□□ -1.5
SCAF11-213ENST00000550629 PSMD11O00231 422 aa5.71□□□□□ -1.5
SCAF11-213ENST00000550629 TP73O15350 636 aa5.71□□□□□ -1.5
SCAF11-213ENST00000550629 HOXA3O43365 443 aaPredicted RBP5.71□□□□□ -1.5
SCAF11-213ENST00000550629 PLRG1O43660 514 aaKnown RBP5.71□□□□□ -1.5
SCAF11-213ENST00000550629 ULK1O75385 1050 aa5.71□□□□□ -1.5
SCAF11-213ENST00000550629 HEXIM1O94992 359 aaKnown RBP5.71□□□□□ -1.5
SCAF11-213ENST00000550629 AGTP01019 485 aa5.71□□□□□ -1.5
SCAF11-213ENST00000550629 PDHA1P08559 390 aa5.71□□□□□ -1.5
SCAF11-213ENST00000550629 CYP2A6P11509 494 aaPredicted RBP5.71□□□□□ -1.5
SCAF11-213ENST00000550629 ZNF30P17039 623 aa5.71□□□□□ -1.5
SCAF11-213ENST00000550629 MCM3P25205 808 aa5.71□□□□□ -1.5
SCAF11-213ENST00000550629 PSMA3P25788 255 aa5.71□□□□□ -1.5
SCAF11-213ENST00000550629 AVPR2P30518 371 aa5.71□□□□□ -1.5
SCAF11-213ENST00000550629 GKP32189 559 aa5.71□□□□□ -1.5
SCAF11-213ENST00000550629 HNF1BP35680 557 aa5.71□□□□□ -1.5
SCAF11-213ENST00000550629 CASRP41180 1078 aa5.71□□□□□ -1.5
SCAF11-213ENST00000550629 RPL21P46778 160 aaKnown RBP5.71□□□□□ -1.5
SCAF11-213ENST00000550629 VPS41P49754 854 aa5.71□□□□□ -1.5
SCAF11-213ENST00000550629 CCR5P51681 352 aa5.71□□□□□ -1.5
SCAF11-213ENST00000550629 ADPRHP54922 357 aa5.71□□□□□ -1.5
SCAF11-213ENST00000550629 SESN3P58005 492 aa5.71□□□□□ -1.5
SCAF11-213ENST00000550629 RPS21P63220 83 aaKnown RBP5.71□□□□□ -1.5
SCAF11-213ENST00000550629 GUCY2DQ02846 1103 aa5.71□□□□□ -1.5
SCAF11-213ENST00000550629 CREB5Q02930 508 aa5.71□□□□□ -1.5
SCAF11-213ENST00000550629 TUBA3CQ13748 450 aa5.71□□□□□ -1.5
SCAF11-213ENST00000550629 TMEM52BQ4KMG9 183 aa5.71□□□□□ -1.5
SCAF11-213ENST00000550629 DNAJC21Q5F1R6 531 aaKnown RBP5.71□□□□□ -1.5
SCAF11-213ENST00000550629 TMEM31Q5JXX7 168 aa5.71□□□□□ -1.5
SCAF11-213ENST00000550629 SPDYCQ5MJ68 293 aa5.71□□□□□ -1.5
SCAF11-213ENST00000550629 FAXCQ5TGI0 409 aa5.71□□□□□ -1.5
SCAF11-213ENST00000550629 FNDC7Q5VTL7 733 aa5.71□□□□□ -1.5
SCAF11-213ENST00000550629 C1QL3Q5VWW1 255 aa5.71□□□□□ -1.5
SCAF11-213ENST00000550629 ZDHHC20Q5W0Z9 365 aa5.71□□□□□ -1.5
SCAF11-213ENST00000550629 KIAA1161Q6NSJ0 714 aa5.71□□□□□ -1.5
SCAF11-213ENST00000550629 LRRC8BQ6P9F7 803 aa5.71□□□□□ -1.5
SCAF11-213ENST00000550629 TUBA3EQ6PEY2 450 aa5.71□□□□□ -1.5
SCAF11-213ENST00000550629 SLC36A4Q6YBV0 504 aa5.71□□□□□ -1.5
SCAF11-213ENST00000550629 PRUNE1Q86TP1 453 aa5.71□□□□□ -1.5
SCAF11-213ENST00000550629 WDR5BQ86VZ2 330 aa5.71□□□□□ -1.5
SCAF11-213ENST00000550629 LONP2Q86WA8 852 aa5.71□□□□□ -1.5
SCAF11-213ENST00000550629 TRIM69Q86WT6 500 aa5.71□□□□□ -1.5
SCAF11-213ENST00000550629 GLB1L2Q8IW92 636 aa5.71□□□□□ -1.5
SCAF11-213ENST00000550629 PDIK1LQ8N165 341 aa5.71□□□□□ -1.5
SCAF11-213ENST00000550629 CBARPQ8N350 705 aaPredicted RBP5.71□□□□□ -1.5
SCAF11-213ENST00000550629 HDDC3Q8N4P3 179 aa5.71□□□□□ -1.5
SCAF11-213ENST00000550629 ZCCHC9Q8N567 271 aaKnown RBP5.71□□□□□ -1.5
SCAF11-213ENST00000550629 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.71□□□□□ -1.5
SCAF11-213ENST00000550629 DNAAF3Q8N9W5 541 aa5.71□□□□□ -1.5
SCAF11-213ENST00000550629 LPCAT1Q8NF37 534 aa5.71□□□□□ -1.5
SCAF11-213ENST00000550629 CADM4Q8NFZ8 388 aa5.71□□□□□ -1.5
SCAF11-213ENST00000550629 OR5M3Q8NGP4 307 aa5.71□□□□□ -1.5
SCAF11-213ENST00000550629 OR2T34Q8NGX1 318 aa5.71□□□□□ -1.5
SCAF11-213ENST00000550629 OR14C36Q8NHC7 312 aa5.71□□□□□ -1.5
SCAF11-213ENST00000550629 DTX3LQ8TDB6 740 aa5.71□□□□□ -1.5
SCAF11-213ENST00000550629 BRSK1Q8TDC3 778 aa5.71□□□□□ -1.5
SCAF11-213ENST00000550629 GANCQ8TET4 914 aa5.71□□□□□ -1.5
SCAF11-213ENST00000550629 PDCD6IPQ8WUM4 868 aaKnown RBP5.71□□□□□ -1.5
SCAF11-213ENST00000550629 ASB12Q8WXK4 309 aa5.71□□□□□ -1.5
SCAF11-213ENST00000550629 ST8SIA2Q92186 375 aa5.71□□□□□ -1.5
SCAF11-213ENST00000550629 ART4Q93070 314 aa5.71□□□□□ -1.5
SCAF11-213ENST00000550629 ARRDC3Q96B67 414 aa5.71□□□□□ -1.5
SCAF11-213ENST00000550629 RMDN1Q96DB5 314 aa5.71□□□□□ -1.5
SCAF11-213ENST00000550629 LRRC39Q96DD0 335 aa5.71□□□□□ -1.5
SCAF11-213ENST00000550629 RANBP9Q96S59 729 aa5.71□□□□□ -1.5
SCAF11-213ENST00000550629 MNTQ99583 582 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms