RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 HLA-DQA2P01906 255 aa11.98□□□□□ -0.49
NR4A1-215ENST00000550557 C2orf80Q0P641 193 aa11.98□□□□□ -0.49
NR4A1-215ENST00000550557 CCDC142Q17RM4 750 aa11.98□□□□□ -0.49
NR4A1-215ENST00000550557 FAM26DQ5JW98 314 aa11.98□□□□□ -0.49
NR4A1-215ENST00000550557 SLC8B1Q6J4K2 584 aa11.98□□□□□ -0.49
NR4A1-215ENST00000550557 SMPDL3AQ92484 453 aa11.98□□□□□ -0.49
NR4A1-215ENST00000550557 SLC9A6Q92581 669 aa11.98□□□□□ -0.49
NR4A1-215ENST00000550557 PMEPA1Q969W9 287 aa11.98□□□□□ -0.49
NR4A1-215ENST00000550557 AZIN2Q96A70 460 aa11.98□□□□□ -0.49
NR4A1-215ENST00000550557 ARMC5Q96C12 935 aa11.98□□□□□ -0.49
NR4A1-215ENST00000550557 ZNF570Q96NI8 536 aa11.98□□□□□ -0.49
NR4A1-215ENST00000550557 TMLHEQ9NVH6 421 aa11.98□□□□□ -0.49
NR4A1-215ENST00000550557 WNK3Q9BYP7 1800 aa11.98□□□□□ -0.49
NR4A1-215ENST00000550557 OR5K4A6NMS3 321 aa11.98□□□□□ -0.49
NR4A1-215ENST00000550557 AP3D1O14617 1153 aa11.98□□□□□ -0.49
NR4A1-215ENST00000550557 SERPINB7O75635 380 aa11.98□□□□□ -0.49
NR4A1-215ENST00000550557 ZNF24P17028 368 aa11.98□□□□□ -0.49
NR4A1-215ENST00000550557 PGDP52209 483 aa11.98□□□□□ -0.49
NR4A1-215ENST00000550557 USP46P62068 366 aa11.98□□□□□ -0.49
NR4A1-215ENST00000550557 CYP4F3Q08477 520 aa11.98□□□□□ -0.49
NR4A1-215ENST00000550557 EML3Q32P44 896 aa11.98□□□□□ -0.49
NR4A1-215ENST00000550557 INO80DQ53TQ3 878 aaPredicted RBP11.98□□□□□ -0.49
NR4A1-215ENST00000550557 ZNF542PQ5EBM4 170 aa11.98□□□□□ -0.49
NR4A1-215ENST00000550557 COLEC12Q5KU26 742 aa11.98□□□□□ -0.49
NR4A1-215ENST00000550557 CAMKVQ8NCB2 501 aa11.98□□□□□ -0.49
NR4A1-215ENST00000550557 GSTCDQ8NEC7 633 aa11.98□□□□□ -0.49
NR4A1-215ENST00000550557 NXPE3Q969Y0 559 aa11.98□□□□□ -0.49
NR4A1-215ENST00000550557 ZDHHC12Q96GR4 267 aa11.98□□□□□ -0.49
NR4A1-215ENST00000550557 SMAD5Q99717 465 aaKnown RBP11.98□□□□□ -0.49
NR4A1-215ENST00000550557 CORO2BQ9UQ03 480 aa11.98□□□□□ -0.49
NR4A1-215ENST00000550557 CLCA3PQ9Y6N3 262 aa11.98□□□□□ -0.49
NR4A1-215ENST00000550557 MID1O15344 667 aa11.98□□□□□ -0.49
NR4A1-215ENST00000550557 SIN3BO75182 1162 aa11.98□□□□□ -0.49
NR4A1-215ENST00000550557 MRPS22P82650 360 aaKnown RBP11.98□□□□□ -0.49
NR4A1-215ENST00000550557 VPS26BQ4G0F5 336 aa11.98□□□□□ -0.49
NR4A1-215ENST00000550557 HEATR4Q86WZ0 1026 aa11.98□□□□□ -0.49
NR4A1-215ENST00000550557 RALGPS2Q86X27 583 aaPredicted RBP11.98□□□□□ -0.49
NR4A1-215ENST00000550557 TTLQ8NG68 377 aa11.98□□□□□ -0.49
NR4A1-215ENST00000550557 MR1Q95460 341 aa11.98□□□□□ -0.49
NR4A1-215ENST00000550557 NXNL1Q96CM4 212 aa11.98□□□□□ -0.49
NR4A1-215ENST00000550557 C5orf34Q96MH7 638 aa11.98□□□□□ -0.49
NR4A1-215ENST00000550557 TMEM79Q9BSE2 394 aa11.98□□□□□ -0.49
NR4A1-215ENST00000550557 MAT2BQ9NZL9 334 aa11.98□□□□□ -0.49
NR4A1-215ENST00000550557 NKX1-2Q9UD57 310 aaPredicted RBP11.98□□□□□ -0.49
NR4A1-215ENST00000550557 FAM155AB1AL88 458 aaPredicted RBP11.98□□□□□ -0.49
NR4A1-215ENST00000550557 RFXANKO14593 260 aa11.98□□□□□ -0.49
NR4A1-215ENST00000550557 ASMTP46597 345 aa11.98□□□□□ -0.49
NR4A1-215ENST00000550557 XIAPP98170 497 aa11.98□□□□□ -0.49
NR4A1-215ENST00000550557 ANKRD54Q6NXT1 300 aa11.98□□□□□ -0.49
NR4A1-215ENST00000550557 NAPRTQ6XQN6 538 aa11.98□□□□□ -0.49
NR4A1-215ENST00000550557 DENND6AQ8IWF6 608 aa11.98□□□□□ -0.49
NR4A1-215ENST00000550557 SAMD14Q8IZD0 417 aaPredicted RBP11.98□□□□□ -0.49
NR4A1-215ENST00000550557 RNF148Q8N7C7 305 aa11.98□□□□□ -0.49
NR4A1-215ENST00000550557 ADCY4Q8NFM4 1077 aa11.98□□□□□ -0.49
NR4A1-215ENST00000550557 UTP15Q8TED0 518 aaKnown RBP11.98□□□□□ -0.49
NR4A1-215ENST00000550557 KBTBD7Q8WVZ9 684 aa11.98□□□□□ -0.49
NR4A1-215ENST00000550557 DLG3Q92796 817 aa11.98□□□□□ -0.49
NR4A1-215ENST00000550557 NOL11Q9H8H0 719 aaKnown RBP11.98□□□□□ -0.49
NR4A1-215ENST00000550557 SLC9A8Q9Y2E8 581 aa11.98□□□□□ -0.49
NR4A1-215ENST00000550557 RAP2CQ9Y3L5 183 aa11.98□□□□□ -0.49
NR4A1-215ENST00000550557 KHNYNO15037 678 aaKnown RBP11.97□□□□□ -0.49
NR4A1-215ENST00000550557 MUSKO15146 869 aa11.97□□□□□ -0.49
NR4A1-215ENST00000550557 ZMPSTE24O75844 475 aa11.97□□□□□ -0.49
NR4A1-215ENST00000550557 ANXA4P09525 319 aaPredicted RBP11.97□□□□□ -0.49
NR4A1-215ENST00000550557 THEGLP0DJG4 465 aa11.97□□□□□ -0.49
NR4A1-215ENST00000550557 PREPP48147 710 aa11.97□□□□□ -0.49
NR4A1-215ENST00000550557 CCR8P51685 355 aa11.97□□□□□ -0.49
NR4A1-215ENST00000550557 RPP38P78345 283 aaKnown RBP11.97□□□□□ -0.49
NR4A1-215ENST00000550557 TRIM74Q86UV6 250 aa11.97□□□□□ -0.49
NR4A1-215ENST00000550557 TCEAL4Q96EI5 215 aa11.97□□□□□ -0.49
NR4A1-215ENST00000550557 CXXC1Q9P0U4 656 aaPredicted RBP11.97□□□□□ -0.49
NR4A1-215ENST00000550557 FTSJ1Q9UET6 329 aa11.97□□□□□ -0.49
NR4A1-215ENST00000550557 TCRBV7S3A2A0A539 114 aa11.97□□□□□ -0.49
NR4A1-215ENST00000550557 SLC28A2O43868 658 aa11.97□□□□□ -0.49
NR4A1-215ENST00000550557 TCF3P15923 654 aa11.97□□□□□ -0.49
NR4A1-215ENST00000550557 PAICSP22234 425 aaKnown RBP11.97□□□□□ -0.49
NR4A1-215ENST00000550557 DPP6P42658 865 aa11.97□□□□□ -0.49
NR4A1-215ENST00000550557 GALNT2Q10471 571 aa11.97□□□□□ -0.49
NR4A1-215ENST00000550557 TSNQ15631 228 aaKnown RBP11.97□□□□□ -0.49
NR4A1-215ENST00000550557 ZBTB49Q6ZSB9 765 aa11.97□□□□□ -0.49
NR4A1-215ENST00000550557 WDTC1Q8N5D0 677 aa11.97□□□□□ -0.49
NR4A1-215ENST00000550557 TMEM156Q8N614 296 aa11.97□□□□□ -0.49
NR4A1-215ENST00000550557 BHLHE22Q8NFJ8 381 aaPredicted RBP11.97□□□□□ -0.49
NR4A1-215ENST00000550557 VN1R2Q8NFZ6 395 aa11.97□□□□□ -0.49
NR4A1-215ENST00000550557 IGSF8Q969P0 613 aa11.97□□□□□ -0.49
NR4A1-215ENST00000550557 CLPTM1LQ96KA5 538 aa11.97□□□□□ -0.49
NR4A1-215ENST00000550557 KLHL25Q9H0H3 589 aa11.97□□□□□ -0.49
NR4A1-215ENST00000550557 LRTM1Q9HBL6 345 aa11.97□□□□□ -0.49
NR4A1-215ENST00000550557 S100A14Q9HCY8 104 aa11.97□□□□□ -0.49
NR4A1-215ENST00000550557 HRASLS2Q9NWW9 162 aa11.97□□□□□ -0.49
NR4A1-215ENST00000550557 SNX7Q9UNH6 387 aa11.97□□□□□ -0.49
NR4A1-215ENST00000550557 NUMBLQ9Y6R0 609 aa11.97□□□□□ -0.49
NR4A1-215ENST00000550557 OR51F1A6NGY5 319 aa11.97□□□□□ -0.49
NR4A1-215ENST00000550557 HDAC3O15379 428 aa11.97□□□□□ -0.49
NR4A1-215ENST00000550557 DUX1O43812 170 aa11.97□□□□□ -0.49
NR4A1-215ENST00000550557 GPRC6AQ5T6X5 926 aa11.97□□□□□ -0.49
NR4A1-215ENST00000550557 HCAR2Q8TDS4 363 aa11.97□□□□□ -0.49
NR4A1-215ENST00000550557 SNRNP27Q8WVK2 155 aaKnown RBP11.97□□□□□ -0.49
NR4A1-215ENST00000550557 KCNS3Q9BQ31 491 aa11.97□□□□□ -0.49
NR4A1-215ENST00000550557 LEF1Q9UJU2 399 aaPredicted RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms