RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 RAB43Q86YS6 212 aa14.92□□□□□ -0.02
RAB5C-205ENST00000550013 HPS6Q86YV9 775 aa14.92□□□□□ -0.02
RAB5C-205ENST00000550013 TCTN2Q96GX1 697 aa14.92□□□□□ -0.02
RAB5C-205ENST00000550013 SGSM3Q96HU1 749 aa14.92□□□□□ -0.02
RAB5C-205ENST00000550013 FAM118BQ9BPY3 351 aa14.92□□□□□ -0.02
RAB5C-205ENST00000550013 TFB2MQ9H5Q4 396 aaKnown RBP14.92□□□□□ -0.02
RAB5C-205ENST00000550013 FAM60AQ9NP50 221 aa14.92□□□□□ -0.02
RAB5C-205ENST00000550013 ACTR10Q9NZ32 417 aa14.92□□□□□ -0.02
RAB5C-205ENST00000550013 TFR2Q9UP52 801 aa14.92□□□□□ -0.02
RAB5C-205ENST00000550013 C17orf113A0A1B0GUU1 675 aa14.91□□□□□ -0.02
RAB5C-205ENST00000550013 C2orf74A8MZ97 194 aa14.91□□□□□ -0.02
RAB5C-205ENST00000550013 CFAP99D6REC4 459 aa14.91□□□□□ -0.02
RAB5C-205ENST00000550013 APOC4-APOC2K7ER74 178 aa14.91□□□□□ -0.02
RAB5C-205ENST00000550013 IFRD1O00458 451 aaPredicted RBP14.91□□□□□ -0.02
RAB5C-205ENST00000550013 MAP3K7O43318 606 aa14.91□□□□□ -0.02
RAB5C-205ENST00000550013 HCRTR1O43613 425 aa14.91□□□□□ -0.02
RAB5C-205ENST00000550013 CRTAMO95727 393 aa14.91□□□□□ -0.02
RAB5C-205ENST00000550013 APOC2P02655 101 aa14.91□□□□□ -0.02
RAB5C-205ENST00000550013 CBSLP0DN79 551 aa14.91□□□□□ -0.02
RAB5C-205ENST00000550013 AGXTP21549 392 aa14.91□□□□□ -0.02
RAB5C-205ENST00000550013 CBSP35520 551 aa14.91□□□□□ -0.02
RAB5C-205ENST00000550013 HADHBP55084 474 aaKnown RBP14.91□□□□□ -0.02
RAB5C-205ENST00000550013 FOXL2P58012 376 aa14.91□□□□□ -0.02
RAB5C-205ENST00000550013 BOP1Q14137 746 aaKnown RBP14.91□□□□□ -0.02
RAB5C-205ENST00000550013 SPARCL1Q14515 664 aa14.91□□□□□ -0.02
RAB5C-205ENST00000550013 NR6A1Q15406 480 aa14.91□□□□□ -0.02
RAB5C-205ENST00000550013 DEFB110Q30KQ9 67 aa14.91□□□□□ -0.02
RAB5C-205ENST00000550013 ANKRD20A2Q5SQ80 823 aa14.91□□□□□ -0.02
RAB5C-205ENST00000550013 VWA5B1Q5TIE3 1220 aa14.91□□□□□ -0.02
RAB5C-205ENST00000550013 ANKRD20A1Q5TYW2 823 aa14.91□□□□□ -0.02
RAB5C-205ENST00000550013 C1orf189Q5VU69 101 aa14.91□□□□□ -0.02
RAB5C-205ENST00000550013 ANKRD20A3Q5VUR7 823 aa14.91□□□□□ -0.02
RAB5C-205ENST00000550013 MLIPQ5VWP3 458 aa14.91□□□□□ -0.02
RAB5C-205ENST00000550013 ZNF787Q6DD87 383 aa14.91□□□□□ -0.02
RAB5C-205ENST00000550013 DENND5AQ6IQ26 1287 aa14.91□□□□□ -0.02
RAB5C-205ENST00000550013 SARM1Q6SZW1 724 aa14.91□□□□□ -0.02
RAB5C-205ENST00000550013 TMEM151BQ8IW70 566 aa14.91□□□□□ -0.02
RAB5C-205ENST00000550013 ACTL9Q8TC94 416 aa14.91□□□□□ -0.02
RAB5C-205ENST00000550013 SNRNP40Q96DI7 357 aaKnown RBP14.91□□□□□ -0.02
RAB5C-205ENST00000550013 DPH2Q9BQC3 489 aaPredicted RBP14.91□□□□□ -0.02
RAB5C-205ENST00000550013 MVB12BQ9H7P6 319 aa14.91□□□□□ -0.02
RAB5C-205ENST00000550013 ASF1BQ9NVP2 202 aa14.91□□□□□ -0.02
RAB5C-205ENST00000550013 ZDHHC3Q9NYG2 299 aa14.91□□□□□ -0.02
RAB5C-205ENST00000550013 ERRFI1Q9UJM3 462 aaPredicted RBP14.91□□□□□ -0.02
RAB5C-205ENST00000550013 ICKQ9UPZ9 632 aa14.91□□□□□ -0.02
RAB5C-205ENST00000550013 IGLV3-16A0A075B6K0 115 aa14.9□□□□□ -0.02
RAB5C-205ENST00000550013 MACROD2A1Z1Q3 448 aa14.9□□□□□ -0.02
RAB5C-205ENST00000550013 MASP2O00187 686 aa14.9□□□□□ -0.02
RAB5C-205ENST00000550013 LDB2O43679 373 aa14.9□□□□□ -0.02
RAB5C-205ENST00000550013 CLDN1O95832 211 aa14.9□□□□□ -0.02
RAB5C-205ENST00000550013 CTSBP07858 339 aa14.9□□□□□ -0.02
RAB5C-205ENST00000550013 MC4RP32245 332 aa14.9□□□□□ -0.02
RAB5C-205ENST00000550013 MAGEA1P43355 309 aa14.9□□□□□ -0.02
RAB5C-205ENST00000550013 CD151P48509 253 aa14.9□□□□□ -0.02
RAB5C-205ENST00000550013 OTUD4Q01804 1114 aaKnown RBP14.9□□□□□ -0.02
RAB5C-205ENST00000550013 ZIC1Q15915 447 aa14.9□□□□□ -0.02
RAB5C-205ENST00000550013 CCDC181Q5TID7 509 aa14.9□□□□□ -0.02
RAB5C-205ENST00000550013 SPESP1Q6UW49 350 aa14.9□□□□□ -0.02
RAB5C-205ENST00000550013 SERPINA9Q86WD7 417 aa14.9□□□□□ -0.02
RAB5C-205ENST00000550013 GPR135Q8IZ08 494 aa14.9□□□□□ -0.02
RAB5C-205ENST00000550013 IQCKQ8N0W5 287 aa14.9□□□□□ -0.02
RAB5C-205ENST00000550013 CISD2Q8N5K1 135 aaKnown RBP14.9□□□□□ -0.02
RAB5C-205ENST00000550013 CLDN19Q8N6F1 224 aa14.9□□□□□ -0.02
RAB5C-205ENST00000550013 C19orf47Q8N9M1 422 aaKnown RBP14.9□□□□□ -0.02
RAB5C-205ENST00000550013 CCDC110Q8TBZ0 833 aa14.9□□□□□ -0.02
RAB5C-205ENST00000550013 HEXDCQ8WVB3 486 aa14.9□□□□□ -0.02
RAB5C-205ENST00000550013 TFGQ92734 400 aaPredicted RBP14.9□□□□□ -0.02
RAB5C-205ENST00000550013 DNAJC1Q96KC8 554 aaKnown RBP14.9□□□□□ -0.02
RAB5C-205ENST00000550013 TBL1YQ9BQ87 522 aa14.9□□□□□ -0.02
RAB5C-205ENST00000550013 DHRS4Q9BTZ2 278 aa14.9□□□□□ -0.02
RAB5C-205ENST00000550013 SPRTNQ9H040 489 aaPredicted RBP14.9□□□□□ -0.02
RAB5C-205ENST00000550013 PADI2Q9Y2J8 665 aa14.9□□□□□ -0.02
RAB5C-205ENST00000550013 AAR2Q9Y312 384 aaKnown RBP14.9□□□□□ -0.02
RAB5C-205ENST00000550013 PTRH2Q9Y3E5 179 aaKnown RBP14.9□□□□□ -0.02
RAB5C-205ENST00000550013 NUP210LQ5VU65 1888 aa14.89□□□□□ -0.03
RAB5C-205ENST00000550013 PCM1Q15154 2024 aa14.89□□□□□ -0.03
RAB5C-205ENST00000550013 TRBV5-4A0A0C4DH59 114 aa14.89□□□□□ -0.03
RAB5C-205ENST00000550013 H3BMH7 237 aa14.89□□□□□ -0.03
RAB5C-205ENST00000550013 KCNN4O15554 427 aa14.89□□□□□ -0.03
RAB5C-205ENST00000550013 CNOT3O75175 753 aaKnown RBP14.89□□□□□ -0.03
RAB5C-205ENST00000550013 OR2B3O76000 313 aa14.89□□□□□ -0.03
RAB5C-205ENST00000550013 LDLRP01130 860 aa14.89□□□□□ -0.03
RAB5C-205ENST00000550013 HBQ1P09105 142 aa14.89□□□□□ -0.03
RAB5C-205ENST00000550013 UGT2B7P16662 529 aa14.89□□□□□ -0.03
RAB5C-205ENST00000550013 ACRV1P26436 265 aa14.89□□□□□ -0.03
RAB5C-205ENST00000550013 VARSP26640 1264 aaKnown RBP14.89□□□□□ -0.03
RAB5C-205ENST00000550013 HADHAP40939 763 aa14.89□□□□□ -0.03
RAB5C-205ENST00000550013 GABRA4P48169 554 aa14.89□□□□□ -0.03
RAB5C-205ENST00000550013 PRPSAP1Q14558 356 aa14.89□□□□□ -0.03
RAB5C-205ENST00000550013 SLC9A5Q14940 896 aa14.89□□□□□ -0.03
RAB5C-205ENST00000550013 GPR33Q49SQ1 333 aa14.89□□□□□ -0.03
RAB5C-205ENST00000550013 ZRANB3Q5FWF4 1079 aa14.89□□□□□ -0.03
RAB5C-205ENST00000550013 DCAF10Q5QP82 559 aa14.89□□□□□ -0.03
RAB5C-205ENST00000550013 TAS2R42Q7RTR8 314 aa14.89□□□□□ -0.03
RAB5C-205ENST00000550013 MAMDC2Q7Z304 686 aaPredicted RBP14.89□□□□□ -0.03
RAB5C-205ENST00000550013 CDKL3Q8IVW4 592 aaPredicted RBP14.89□□□□□ -0.03
RAB5C-205ENST00000550013 OR5AR1Q8NGP9 310 aa14.89□□□□□ -0.03
RAB5C-205ENST00000550013 N4BP2L2Q92802 583 aaPredicted RBP14.89□□□□□ -0.03
RAB5C-205ENST00000550013 INPP5DQ92835 1189 aa14.89□□□□□ -0.03
RAB5C-205ENST00000550013 VPS37BQ9H9H4 285 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms