RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 GABRQQ9UN88 632 aa13.48□□□□□ -0.25
HDAC7-228ENST00000548938 ERVK-11Q9UQG0 969 aa13.48□□□□□ -0.25
HDAC7-228ENST00000548938 PCDHB14Q9Y5E9 798 aa13.48□□□□□ -0.25
HDAC7-228ENST00000548938 OR1I1O60431 355 aa13.48□□□□□ -0.25
HDAC7-228ENST00000548938 B3GAT3O94766 335 aa13.48□□□□□ -0.25
HDAC7-228ENST00000548938 AKR1A1P14550 325 aa13.48□□□□□ -0.25
HDAC7-228ENST00000548938 SERPINB1P30740 379 aa13.48□□□□□ -0.25
HDAC7-228ENST00000548938 GGT5P36269 586 aa13.48□□□□□ -0.25
HDAC7-228ENST00000548938 RPL38P63173 70 aaKnown RBP13.48□□□□□ -0.25
HDAC7-228ENST00000548938 SLC35A2P78381 396 aa13.48□□□□□ -0.25
HDAC7-228ENST00000548938 VAC14Q08AM6 782 aa13.48□□□□□ -0.25
HDAC7-228ENST00000548938 CLCA4Q14CN2 919 aa13.48□□□□□ -0.25
HDAC7-228ENST00000548938 ABRAXAS2Q15018 415 aa13.48□□□□□ -0.25
HDAC7-228ENST00000548938 SF3B4Q15427 424 aaKnown RBP eCLIP13.48□□□□□ -0.254e-9■■■■□ 21.6
HDAC7-228ENST00000548938 FAM174BQ3ZCQ3 159 aa13.48□□□□□ -0.25
HDAC7-228ENST00000548938 CHPFQ8IZ52 775 aa13.48□□□□□ -0.25
HDAC7-228ENST00000548938 OR4K2Q8NGD2 314 aa13.48□□□□□ -0.25
HDAC7-228ENST00000548938 REXO5Q96IC2 774 aaKnown RBP13.48□□□□□ -0.25
HDAC7-228ENST00000548938 C1orf74Q96LT6 269 aa13.48□□□□□ -0.25
HDAC7-228ENST00000548938 DSN1Q9H410 356 aa13.48□□□□□ -0.25
HDAC7-228ENST00000548938 RIBC2Q9H4K1 309 aa13.48□□□□□ -0.25
HDAC7-228ENST00000548938 ABCB10Q9NRK6 738 aa13.48□□□□□ -0.25
HDAC7-228ENST00000548938 FAM105AQ9NUU6 356 aa13.48□□□□□ -0.25
HDAC7-228ENST00000548938 ORC6Q9Y5N6 252 aa13.48□□□□□ -0.25
HDAC7-228ENST00000548938 DOCK4Q8N1I0 1966 aa13.47□□□□□ -0.25
HDAC7-228ENST00000548938 IGFBP5P24593 272 aa13.47□□□□□ -0.25
HDAC7-228ENST00000548938 EIF2DP41214 584 aaKnown RBP13.47□□□□□ -0.25
HDAC7-228ENST00000548938 ZNF140P52738 457 aaPredicted RBP13.47□□□□□ -0.25
HDAC7-228ENST00000548938 IL1RL1Q01638 556 aa13.47□□□□□ -0.25
HDAC7-228ENST00000548938 ZNF235Q14590 738 aa13.47□□□□□ -0.25
HDAC7-228ENST00000548938 SMN1Q16637 294 aaKnown RBP13.47□□□□□ -0.25
HDAC7-228ENST00000548938 SDHAF4Q5VUM1 108 aa13.47□□□□□ -0.25
HDAC7-228ENST00000548938 ARMC8Q8IUR7 673 aa13.47□□□□□ -0.25
HDAC7-228ENST00000548938 DACH2Q96NX9 599 aa13.47□□□□□ -0.25
HDAC7-228ENST00000548938 ASPSCR1Q9BZE9 553 aa13.47□□□□□ -0.25
HDAC7-228ENST00000548938 THG1LQ9NWX6 298 aaKnown RBP13.47□□□□□ -0.25
HDAC7-228ENST00000548938 TRMT6Q9UJA5 497 aaKnown RBP13.47□□□□□ -0.25
HDAC7-228ENST00000548938 ATP11BQ9Y2G3 1177 aa13.47□□□□□ -0.25
HDAC7-228ENST00000548938 FNDC3AQ9Y2H6 1198 aaKnown RBP13.47□□□□□ -0.25
HDAC7-228ENST00000548938 ACTL7AQ9Y615 435 aa13.47□□□□□ -0.25
HDAC7-228ENST00000548938 GBF1Q92538 1859 aa13.47□□□□□ -0.25
HDAC7-228ENST00000548938 M0QX08 132 aa13.47□□□□□ -0.25
HDAC7-228ENST00000548938 ARVCFO00192 962 aa13.47□□□□□ -0.25
HDAC7-228ENST00000548938 RAMP2O60895 175 aa13.47□□□□□ -0.25
HDAC7-228ENST00000548938 SERPINA1P01009 418 aa13.47□□□□□ -0.25
HDAC7-228ENST00000548938 MSH3P20585 1137 aa13.47□□□□□ -0.25
HDAC7-228ENST00000548938 NKX2-5P52952 324 aaPredicted RBP13.47□□□□□ -0.25
HDAC7-228ENST00000548938 IL18R1Q13478 541 aa13.47□□□□□ -0.25
HDAC7-228ENST00000548938 SPANXN4Q5MJ08 99 aa13.47□□□□□ -0.25
HDAC7-228ENST00000548938 SYT6Q5T7P8 510 aaPredicted RBP13.47□□□□□ -0.25
HDAC7-228ENST00000548938 ATAD3BQ5T9A4 648 aa13.47□□□□□ -0.25
HDAC7-228ENST00000548938 RAP1GAP2Q684P5 730 aa13.47□□□□□ -0.25
HDAC7-228ENST00000548938 GCNT7Q6ZNI0 430 aa13.47□□□□□ -0.25
HDAC7-228ENST00000548938 CCDC80Q76M96 950 aa13.47□□□□□ -0.25
HDAC7-228ENST00000548938 CYP4Z1Q86W10 505 aa13.47□□□□□ -0.25
HDAC7-228ENST00000548938 METTL23Q86XA0 190 aa13.47□□□□□ -0.25
HDAC7-228ENST00000548938 SCN4BQ8IWT1 228 aa13.47□□□□□ -0.25
HDAC7-228ENST00000548938 PIANPQ8IYJ0 282 aa13.47□□□□□ -0.25
HDAC7-228ENST00000548938 C10orf111Q8N326 155 aa13.47□□□□□ -0.25
HDAC7-228ENST00000548938 OR4F6Q8NGB9 312 aa13.47□□□□□ -0.25
HDAC7-228ENST00000548938 CD200R1Q8TD46 325 aa13.47□□□□□ -0.25
HDAC7-228ENST00000548938 SLC39A13Q96H72 371 aa13.47□□□□□ -0.25
HDAC7-228ENST00000548938 EHD1Q9H4M9 534 aa13.47□□□□□ -0.25
HDAC7-228ENST00000548938 DUSP21Q9H596 190 aa13.47□□□□□ -0.25
HDAC7-228ENST00000548938 SARS2Q9NP81 518 aaKnown RBP13.47□□□□□ -0.25
HDAC7-228ENST00000548938 DCAF13Q9NV06 445 aaKnown RBP13.47□□□□□ -0.25
HDAC7-228ENST00000548938 NLE1Q9NVX2 485 aaPredicted RBP13.47□□□□□ -0.25
HDAC7-228ENST00000548938 DUSP11O75319 330 aaKnown RBP13.46□□□□□ -0.25
HDAC7-228ENST00000548938 VPS26AO75436 327 aa13.46□□□□□ -0.25
HDAC7-228ENST00000548938 CREG1O75629 220 aa13.46□□□□□ -0.25
HDAC7-228ENST00000548938 SCELO95171 688 aa13.46□□□□□ -0.25
HDAC7-228ENST00000548938 OR4Q2P0C623 313 aa13.46□□□□□ -0.25
HDAC7-228ENST00000548938 ITGAMP11215 1152 aa13.46□□□□□ -0.25
HDAC7-228ENST00000548938 SLC2A4P14672 509 aa13.46□□□□□ -0.25
HDAC7-228ENST00000548938 HOXC8P31273 242 aa13.46□□□□□ -0.25
HDAC7-228ENST00000548938 ALDH7A1P49419 539 aaKnown RBP13.46□□□□□ -0.25
HDAC7-228ENST00000548938 HNRNPFP52597 415 aaKnown RBP13.46□□□□□ -0.25
HDAC7-228ENST00000548938 IL10RBQ08334 325 aa13.46□□□□□ -0.25
HDAC7-228ENST00000548938 MAPKAPK3Q16644 382 aa13.46□□□□□ -0.25
HDAC7-228ENST00000548938 PSAPL1Q6NUJ1 521 aa13.46□□□□□ -0.25
HDAC7-228ENST00000548938 FBXL22Q6P050 247 aa13.46□□□□□ -0.25
HDAC7-228ENST00000548938 AFTPHQ6ULP2 937 aa13.46□□□□□ -0.25
HDAC7-228ENST00000548938 MICU2Q8IYU8 434 aa13.46□□□□□ -0.25
HDAC7-228ENST00000548938 Q8N9G6 341 aaPredicted RBP13.46□□□□□ -0.25
HDAC7-228ENST00000548938 KATNAL1Q9BW62 490 aa13.46□□□□□ -0.25
HDAC7-228ENST00000548938 SLC6A13Q9NSD5 602 aa13.46□□□□□ -0.25
HDAC7-228ENST00000548938 TLR6Q9Y2C9 796 aa13.46□□□□□ -0.25
HDAC7-228ENST00000548938 MYO16Q9Y6X6 1858 aa13.46□□□□□ -0.25
HDAC7-228ENST00000548938 C17orf102A2RUQ5 167 aa13.46□□□□□ -0.26
HDAC7-228ENST00000548938 IFRD1O00458 451 aaPredicted RBP13.46□□□□□ -0.26
HDAC7-228ENST00000548938 OR7A17O14581 309 aa13.46□□□□□ -0.26
HDAC7-228ENST00000548938 PARNO95453 639 aaKnown RBP13.46□□□□□ -0.26
HDAC7-228ENST00000548938 CYBAP13498 195 aa13.46□□□□□ -0.26
HDAC7-228ENST00000548938 AKT1P31749 480 aa13.46□□□□□ -0.26
HDAC7-228ENST00000548938 GRK3P35626 688 aa13.46□□□□□ -0.26
HDAC7-228ENST00000548938 PBX3P40426 434 aa13.46□□□□□ -0.26
HDAC7-228ENST00000548938 NRIP1P48552 1158 aa13.46□□□□□ -0.26
HDAC7-228ENST00000548938 PIK3CGP48736 1102 aa13.46□□□□□ -0.26
HDAC7-228ENST00000548938 FLT3LGP49771 235 aa13.46□□□□□ -0.26
HDAC7-228ENST00000548938 ST13P50502 369 aaKnown RBP13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms