RNA–Protein interactions for RNA: ENST00000548132.1

GCN1-204, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-204ENST00000548132 UBA6A0AVT1 1052 aaPredicted RBP12.06□□□□□ -0.48
GCN1-204ENST00000548132 GSAPA4D1B5 854 aa12.06□□□□□ -0.48
GCN1-204ENST00000548132 CDC14CA4D256 554 aa12.06□□□□□ -0.48
GCN1-204ENST00000548132 ERI2A8K979 691 aaKnown RBP12.06□□□□□ -0.48
GCN1-204ENST00000548132 CREG1O75629 220 aa12.06□□□□□ -0.48
GCN1-204ENST00000548132 SCRG1O75711 98 aa12.06□□□□□ -0.48
GCN1-204ENST00000548132 GOT2P00505 430 aaKnown RBP12.06□□□□□ -0.48
GCN1-204ENST00000548132 SFTPCP11686 197 aa12.06□□□□□ -0.48
GCN1-204ENST00000548132 ARNTP27540 789 aa12.06□□□□□ -0.48
GCN1-204ENST00000548132 PRDX3P30048 256 aaKnown RBP12.06□□□□□ -0.48
GCN1-204ENST00000548132 NSG1P42857 185 aa12.06□□□□□ -0.48
GCN1-204ENST00000548132 CCZ1BP86790 482 aa12.06□□□□□ -0.48
GCN1-204ENST00000548132 CCZ1P86791 482 aaPredicted RBP12.06□□□□□ -0.48
GCN1-204ENST00000548132 MC1RQ01726 317 aa12.06□□□□□ -0.48
GCN1-204ENST00000548132 ERV3-1Q14264 604 aa12.06□□□□□ -0.48
GCN1-204ENST00000548132 GRB7Q14451 532 aa12.06□□□□□ -0.48
GCN1-204ENST00000548132 DEFB110Q30KQ9 67 aa12.06□□□□□ -0.48
GCN1-204ENST00000548132 PLEKHS1Q5SXH7 462 aa12.06□□□□□ -0.48
GCN1-204ENST00000548132 TSTD2Q5T7W7 516 aa12.06□□□□□ -0.48
GCN1-204ENST00000548132 SEL1L2Q5TEA6 688 aa12.06□□□□□ -0.48
GCN1-204ENST00000548132 AFTPHQ6ULP2 937 aa12.06□□□□□ -0.48
GCN1-204ENST00000548132 CDHR3Q6ZTQ4 885 aa12.06□□□□□ -0.48
GCN1-204ENST00000548132 TAS2R42Q7RTR8 314 aa12.06□□□□□ -0.48
GCN1-204ENST00000548132 DSELQ8IZU8 1212 aa12.06□□□□□ -0.48
GCN1-204ENST00000548132 RNF10Q8N5U6 811 aaKnown RBP12.06□□□□□ -0.48
GCN1-204ENST00000548132 APOBEC4Q8WW27 367 aaKnown RBP12.06□□□□□ -0.48
GCN1-204ENST00000548132 LCN9Q8WX39 176 aa12.06□□□□□ -0.48
GCN1-204ENST00000548132 LRFN5Q96NI6 719 aa12.06□□□□□ -0.48
GCN1-204ENST00000548132 MVB12BQ9H7P6 319 aa12.06□□□□□ -0.48
GCN1-204ENST00000548132 FAM60AQ9NP50 221 aa12.06□□□□□ -0.48
GCN1-204ENST00000548132 C1GALT1Q9NS00 363 aa12.06□□□□□ -0.48
GCN1-204ENST00000548132 SOHLH2Q9NX45 425 aa12.06□□□□□ -0.48
GCN1-204ENST00000548132 SMARCAL1Q9NZC9 954 aa12.06□□□□□ -0.48
GCN1-204ENST00000548132 PLAGL1Q9UM63 463 aa12.06□□□□□ -0.48
GCN1-204ENST00000548132 GUCA1BQ9UMX6 200 aa12.06□□□□□ -0.48
GCN1-204ENST00000548132 POLHQ9Y253 713 aa12.06□□□□□ -0.48
GCN1-204ENST00000548132 PCDHB3Q9Y5E6 796 aa12.06□□□□□ -0.48
GCN1-204ENST00000548132 HEBP2Q9Y5Z4 205 aa12.06□□□□□ -0.48
GCN1-204ENST00000548132 HIVEP3Q5T1R4 2406 aa12.06□□□□□ -0.48
GCN1-204ENST00000548132 HEATR5BQ9P2D3 2071 aa12.06□□□□□ -0.48
GCN1-204ENST00000548132 DOCK10Q96BY6 2186 aa12.05□□□□□ -0.48
GCN1-204ENST00000548132 HEATR9A2RTY3 570 aa12.05□□□□□ -0.48
GCN1-204ENST00000548132 KRT87PA6NCN2 255 aa12.05□□□□□ -0.48
GCN1-204ENST00000548132 MATN2O00339 956 aa12.05□□□□□ -0.48
GCN1-204ENST00000548132 LIN7AO14910 233 aaPredicted RBP12.05□□□□□ -0.48
GCN1-204ENST00000548132 IFNB1P01574 187 aa12.05□□□□□ -0.48
GCN1-204ENST00000548132 UGT2B7P16662 529 aa12.05□□□□□ -0.48
GCN1-204ENST00000548132 CDH3P22223 829 aa12.05□□□□□ -0.48
GCN1-204ENST00000548132 PKLRP30613 574 aa12.05□□□□□ -0.48
GCN1-204ENST00000548132 RPL22P35268 128 aaKnown RBP12.05□□□□□ -0.48
GCN1-204ENST00000548132 FDFT1P37268 417 aa12.05□□□□□ -0.48
GCN1-204ENST00000548132 CASRP41180 1078 aa12.05□□□□□ -0.48
GCN1-204ENST00000548132 GCGRP47871 477 aa12.05□□□□□ -0.48
GCN1-204ENST00000548132 CSRP3P50461 194 aa12.05□□□□□ -0.48
GCN1-204ENST00000548132 CHAF1BQ13112 559 aa12.05□□□□□ -0.48
GCN1-204ENST00000548132 PRKG2Q13237 762 aa12.05□□□□□ -0.48
GCN1-204ENST00000548132 UGT8Q16880 541 aa12.05□□□□□ -0.48
GCN1-204ENST00000548132 LACTB2Q53H82 288 aaPredicted RBP12.05□□□□□ -0.48
GCN1-204ENST00000548132 SPESP1Q6UW49 350 aa12.05□□□□□ -0.48
GCN1-204ENST00000548132 LINC00523Q86TU6 105 aa12.05□□□□□ -0.48
GCN1-204ENST00000548132 LDB1Q86U70 411 aaPredicted RBP12.05□□□□□ -0.48
GCN1-204ENST00000548132 TMEM126BQ8IUX1 230 aa12.05□□□□□ -0.48
GCN1-204ENST00000548132 C19orf47Q8N9M1 422 aaKnown RBP12.05□□□□□ -0.48
GCN1-204ENST00000548132 LMNTD1Q8N9Z9 388 aa12.05□□□□□ -0.48
GCN1-204ENST00000548132 LINC01555Q8NAE3 123 aa12.05□□□□□ -0.48
GCN1-204ENST00000548132 TFGQ92734 400 aaPredicted RBP12.05□□□□□ -0.48
GCN1-204ENST00000548132 HDAC10Q969S8 669 aa12.05□□□□□ -0.48
GCN1-204ENST00000548132 OR2A14Q96R47 310 aa12.05□□□□□ -0.48
GCN1-204ENST00000548132 FERD3LQ96RJ6 166 aa12.05□□□□□ -0.48
GCN1-204ENST00000548132 CHST8Q9H2A9 424 aa12.05□□□□□ -0.48
GCN1-204ENST00000548132 SRMSQ9H3Y6 488 aa12.05□□□□□ -0.48
GCN1-204ENST00000548132 TREX1Q9NSU2 369 aa12.05□□□□□ -0.48
GCN1-204ENST00000548132 ACTR10Q9NZ32 417 aa12.05□□□□□ -0.48
GCN1-204ENST00000548132 KCND3Q9UK17 655 aa12.05□□□□□ -0.48
GCN1-204ENST00000548132 PADI1Q9ULC6 663 aa12.05□□□□□ -0.48
GCN1-204ENST00000548132 UNC79Q9P2D8 2635 aa12.05□□□□□ -0.48
GCN1-204ENST00000548132 MDC1Q14676 2089 aaKnown RBP12.04□□□□□ -0.48
GCN1-204ENST00000548132 SPTBN1Q01082 2364 aaKnown RBP12.04□□□□□ -0.48
GCN1-204ENST00000548132 CLEC18AA5D8T8 446 aa12.04□□□□□ -0.48
GCN1-204ENST00000548132 TMEM150CB9EJG8 249 aa12.04□□□□□ -0.48
GCN1-204ENST00000548132 CNOT3O75175 753 aaKnown RBP12.04□□□□□ -0.48
GCN1-204ENST00000548132 KATNA1O75449 491 aa12.04□□□□□ -0.48
GCN1-204ENST00000548132 RFPL1O75677 317 aa12.04□□□□□ -0.48
GCN1-204ENST00000548132 RECKO95980 971 aa12.04□□□□□ -0.48
GCN1-204ENST00000548132 MT-ND3P03897 115 aa12.04□□□□□ -0.48
GCN1-204ENST00000548132 GSTM1P09488 218 aa12.04□□□□□ -0.48
GCN1-204ENST00000548132 PTPN4P29074 926 aa12.04□□□□□ -0.48
GCN1-204ENST00000548132 CCR7P32248 378 aa12.04□□□□□ -0.48
GCN1-204ENST00000548132 PTGIRP43119 386 aa12.04□□□□□ -0.48
GCN1-204ENST00000548132 CRADDP78560 199 aa12.04□□□□□ -0.48
GCN1-204ENST00000548132 FOXK1P85037 733 aa12.04□□□□□ -0.48
GCN1-204ENST00000548132 GSTM4Q03013 218 aa12.04□□□□□ -0.48
GCN1-204ENST00000548132 SNX1Q13596 522 aa12.04□□□□□ -0.48
GCN1-204ENST00000548132 GSE1Q14687 1217 aa12.04□□□□□ -0.48
GCN1-204ENST00000548132 BRD3Q15059 726 aa12.04□□□□□ -0.48
GCN1-204ENST00000548132 PTCHD3Q3KNS1 767 aa12.04□□□□□ -0.48
GCN1-204ENST00000548132 IZUMO3Q5VZ72 239 aa12.04□□□□□ -0.48
GCN1-204ENST00000548132 CYB5D1Q6P9G0 228 aa12.04□□□□□ -0.48
GCN1-204ENST00000548132 CLEC18BQ6UXF7 455 aa12.04□□□□□ -0.48
GCN1-204ENST00000548132 AMIGO1Q86WK6 493 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms