RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 E7EQ34 232 aa19.73■□□□□ 0.75
SSH1-207ENST00000547862 RAB40ALP0C0E4 278 aa19.73■□□□□ 0.75
SSH1-207ENST00000547862 CETN2P41208 172 aa19.73■□□□□ 0.75
SSH1-207ENST00000547862 VAV2P52735 878 aa19.73■□□□□ 0.75
SSH1-207ENST00000547862 RWDD2BP57060 319 aa19.73■□□□□ 0.75
SSH1-207ENST00000547862 MSLNQ13421 630 aaPredicted RBP19.73■□□□□ 0.75
SSH1-207ENST00000547862 NCF4Q15080 339 aa19.73■□□□□ 0.75
SSH1-207ENST00000547862 FHL5Q5TD97 284 aa19.73■□□□□ 0.75
SSH1-207ENST00000547862 C1orf189Q5VU69 101 aa19.73■□□□□ 0.75
SSH1-207ENST00000547862 CDHR3Q6ZTQ4 885 aa19.73■□□□□ 0.75
SSH1-207ENST00000547862 CCDC170Q8IYT3 715 aa19.73■□□□□ 0.75
SSH1-207ENST00000547862 OR5AR1Q8NGP9 310 aa19.73■□□□□ 0.75
SSH1-207ENST00000547862 TRAPPC9Q96Q05 1148 aa19.73■□□□□ 0.75
SSH1-207ENST00000547862 MVB12BQ9H7P6 319 aa19.73■□□□□ 0.75
SSH1-207ENST00000547862 IRAK4Q9NWZ3 460 aa19.73■□□□□ 0.75
SSH1-207ENST00000547862 SMARCAL1Q9NZC9 954 aa19.73■□□□□ 0.75
SSH1-207ENST00000547862 SERTAD3Q9UJW9 196 aa19.73■□□□□ 0.75
SSH1-207ENST00000547862 ICKQ9UPZ9 632 aa19.73■□□□□ 0.75
SSH1-207ENST00000547862 DUSP10Q9Y6W6 482 aa19.73■□□□□ 0.75
SSH1-207ENST00000547862 NUP210LQ5VU65 1888 aa19.73■□□□□ 0.75
SSH1-207ENST00000547862 SPTAN1Q13813 2472 aaKnown RBP19.73■□□□□ 0.75
SSH1-207ENST00000547862 ICE1Q9Y2F5 2266 aa19.72■□□□□ 0.75
SSH1-207ENST00000547862 C17orf113A0A1B0GUU1 675 aa19.72■□□□□ 0.75
SSH1-207ENST00000547862 ZNF749O43361 778 aa19.72■□□□□ 0.75
SSH1-207ENST00000547862 SORBS2O94875 1100 aaKnown RBP19.72■□□□□ 0.75
SSH1-207ENST00000547862 TJP3O95049 919 aa19.72■□□□□ 0.75
SSH1-207ENST00000547862 PTPN7P35236 360 aa19.72■□□□□ 0.75
SSH1-207ENST00000547862 SLC9A5Q14940 896 aa19.72■□□□□ 0.75
SSH1-207ENST00000547862 DBN1Q16643 649 aa19.72■□□□□ 0.75
SSH1-207ENST00000547862 GPR33Q49SQ1 333 aa19.72■□□□□ 0.75
SSH1-207ENST00000547862 NAPRTQ6XQN6 538 aa19.72■□□□□ 0.75
SSH1-207ENST00000547862 ADGRF3Q8IZF5 1079 aa19.72■□□□□ 0.75
SSH1-207ENST00000547862 C19orf47Q8N9M1 422 aaKnown RBP19.72■□□□□ 0.75
SSH1-207ENST00000547862 FAM71DQ8N9W8 422 aa19.72■□□□□ 0.75
SSH1-207ENST00000547862 GALNT11Q8NCW6 608 aa19.72■□□□□ 0.75
SSH1-207ENST00000547862 ALG3Q92685 438 aa19.72■□□□□ 0.75
SSH1-207ENST00000547862 TFGQ92734 400 aaPredicted RBP19.72■□□□□ 0.75
SSH1-207ENST00000547862 PPP1R2P1Q96PQ5 205 aa19.72■□□□□ 0.75
SSH1-207ENST00000547862 PSMG3-AS1Q96PY0 264 aa19.72■□□□□ 0.75
SSH1-207ENST00000547862 PITPNM3Q9BZ71 974 aa19.72■□□□□ 0.75
SSH1-207ENST00000547862 PLAGL1Q9UM63 463 aa19.72■□□□□ 0.75
SSH1-207ENST00000547862 TDRKHQ9Y2W6 561 aaKnown RBP19.72■□□□□ 0.75
SSH1-207ENST00000547862 IGLV3-16A0A075B6K0 115 aa19.71■□□□□ 0.75
SSH1-207ENST00000547862 OR51F1A6NGY5 319 aa19.71■□□□□ 0.75
SSH1-207ENST00000547862 DPM1O60762 260 aa19.71■□□□□ 0.75
SSH1-207ENST00000547862 IPO7O95373 1038 aaKnown RBP19.71■□□□□ 0.75
SSH1-207ENST00000547862 CAPN1P07384 714 aa19.71■□□□□ 0.75
SSH1-207ENST00000547862 BOP1Q14137 746 aaKnown RBP19.71■□□□□ 0.75
SSH1-207ENST00000547862 SYTL3Q4VX76 610 aa19.71■□□□□ 0.75
SSH1-207ENST00000547862 SPESP1Q6UW49 350 aa19.71■□□□□ 0.75
SSH1-207ENST00000547862 RAB43Q86YS6 212 aa19.71■□□□□ 0.75
SSH1-207ENST00000547862 PIANPQ8IYJ0 282 aa19.71■□□□□ 0.75
SSH1-207ENST00000547862 GPR135Q8IZ08 494 aa19.71■□□□□ 0.75
SSH1-207ENST00000547862 ZBTB2Q8N680 514 aa19.71■□□□□ 0.75
SSH1-207ENST00000547862 ELMO1Q92556 727 aa19.71■□□□□ 0.75
SSH1-207ENST00000547862 TFB2MQ9H5Q4 396 aaKnown RBP19.71■□□□□ 0.75
SSH1-207ENST00000547862 SYTL2Q9HCH5 934 aa19.71■□□□□ 0.75
SSH1-207ENST00000547862 SLAMF7Q9NQ25 335 aa19.71■□□□□ 0.75
SSH1-207ENST00000547862 NLE1Q9NVX2 485 aaPredicted RBP19.71■□□□□ 0.75
SSH1-207ENST00000547862 GPR83Q9NYM4 423 aa19.71■□□□□ 0.75
SSH1-207ENST00000547862 FEZ2Q9UHY8 353 aaPredicted RBP19.71■□□□□ 0.75
SSH1-207ENST00000547862 ASF1AQ9Y294 204 aa19.71■□□□□ 0.75
SSH1-207ENST00000547862 EFR3BQ9Y2G0 817 aa19.71■□□□□ 0.75
SSH1-207ENST00000547862 PADI2Q9Y2J8 665 aa19.71■□□□□ 0.75
SSH1-207ENST00000547862 PRSS21Q9Y6M0 314 aa19.71■□□□□ 0.75
SSH1-207ENST00000547862 SPTBN1Q01082 2364 aaKnown RBP19.71■□□□□ 0.75
SSH1-207ENST00000547862 ESPL1Q14674 2120 aa19.7■□□□□ 0.74
SSH1-207ENST00000547862 TRBV5-4A0A0C4DH59 114 aa19.7■□□□□ 0.74
SSH1-207ENST00000547862 METTL18O95568 372 aa19.7■□□□□ 0.74
SSH1-207ENST00000547862 UGT2B7P16662 529 aa19.7■□□□□ 0.74
SSH1-207ENST00000547862 AGXTP21549 392 aa19.7■□□□□ 0.74
SSH1-207ENST00000547862 CSE1LP55060 971 aaKnown RBP19.7■□□□□ 0.74
SSH1-207ENST00000547862 CACNG1Q06432 222 aa19.7■□□□□ 0.74
SSH1-207ENST00000547862 ZNF658BQ4V348 819 aaPredicted RBP19.7■□□□□ 0.74
SSH1-207ENST00000547862 MLIPQ5VWP3 458 aa19.7■□□□□ 0.74
SSH1-207ENST00000547862 JMJD6Q6NYC1 403 aaPredicted RBP19.7■□□□□ 0.74
SSH1-207ENST00000547862 ACRBPQ8NEB7 543 aa19.7■□□□□ 0.74
SSH1-207ENST00000547862 ALS2CR12Q96Q35 445 aa19.7■□□□□ 0.74
SSH1-207ENST00000547862 LRRC40Q9H9A6 602 aa19.7■□□□□ 0.74
SSH1-207ENST00000547862 FAM60AQ9NP50 221 aa19.7■□□□□ 0.74
SSH1-207ENST00000547862 MLXIPLQ9NP71 852 aa19.7■□□□□ 0.74
SSH1-207ENST00000547862 GPN3Q9UHW5 284 aaPredicted RBP19.7■□□□□ 0.74
SSH1-207ENST00000547862 PACSIN2Q9UNF0 486 aaPredicted RBP19.7■□□□□ 0.74
SSH1-207ENST00000547862 MAP4K5Q9Y4K4 846 aa19.7■□□□□ 0.74
SSH1-207ENST00000547862 RP1L1Q8IWN7 2480 aaPredicted RBP19.69■□□□□ 0.74
SSH1-207ENST00000547862 CEACAM4O75871 244 aa19.69■□□□□ 0.74
SSH1-207ENST00000547862 OR2B3O76000 313 aa19.69■□□□□ 0.74
SSH1-207ENST00000547862 CBSLP0DN79 551 aa19.69■□□□□ 0.74
SSH1-207ENST00000547862 CBSP35520 551 aa19.69■□□□□ 0.74
SSH1-207ENST00000547862 CD151P48509 253 aa19.69■□□□□ 0.74
SSH1-207ENST00000547862 RRADP55042 308 aa19.69■□□□□ 0.74
SSH1-207ENST00000547862 FOXL2P58012 376 aa19.69■□□□□ 0.74
SSH1-207ENST00000547862 RPA4Q13156 261 aa19.69■□□□□ 0.74
SSH1-207ENST00000547862 MRPL49Q13405 166 aaKnown RBP19.69■□□□□ 0.74
SSH1-207ENST00000547862 INPP5JQ15735 1006 aaPredicted RBP19.69■□□□□ 0.74
SSH1-207ENST00000547862 CCDC38Q502W7 563 aa19.69■□□□□ 0.74
SSH1-207ENST00000547862 C4orf17Q53FE4 359 aa19.69■□□□□ 0.74
SSH1-207ENST00000547862 SLC6A19Q695T7 634 aa19.69■□□□□ 0.74
SSH1-207ENST00000547862 CDKN2AIPNLQ96HQ2 116 aa19.69■□□□□ 0.74
SSH1-207ENST00000547862 SGSM3Q96HU1 749 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms