RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 MAN2B2Q9Y2E5 1009 aa12.94□□□□□ -0.34
CPSF6-204ENST00000547486 COL12A1Q99715 3063 aa12.94□□□□□ -0.34
CPSF6-204ENST00000547486 SLC5A10A0PJK1 596 aa12.93□□□□□ -0.34
CPSF6-204ENST00000547486 TMEM150CB9EJG8 249 aa12.93□□□□□ -0.34
CPSF6-204ENST00000547486 MKRN2OSH3BPM6 223 aa12.93□□□□□ -0.34
CPSF6-204ENST00000547486 MATN2O00339 956 aa12.93□□□□□ -0.34
CPSF6-204ENST00000547486 ARHGAP6O43182 974 aa12.93□□□□□ -0.34
CPSF6-204ENST00000547486 HCRTR1O43613 425 aa12.93□□□□□ -0.34
CPSF6-204ENST00000547486 SUN1O94901 812 aa12.93□□□□□ -0.34
CPSF6-204ENST00000547486 CAPN1P07384 714 aa12.93□□□□□ -0.34
CPSF6-204ENST00000547486 ZSCAN5DPP0CG00 497 aa12.93□□□□□ -0.34
CPSF6-204ENST00000547486 CDC25BP30305 580 aa12.93□□□□□ -0.34
CPSF6-204ENST00000547486 RORAP35398 523 aa12.93□□□□□ -0.34
CPSF6-204ENST00000547486 FOXK1P85037 733 aa12.93□□□□□ -0.34
CPSF6-204ENST00000547486 SNX1Q13596 522 aa12.93□□□□□ -0.34
CPSF6-204ENST00000547486 ITIH4Q14624 930 aa12.93□□□□□ -0.34
CPSF6-204ENST00000547486 IZUMO3Q5VZ72 239 aa12.93□□□□□ -0.34
CPSF6-204ENST00000547486 UNC5AQ6ZN44 842 aa12.93□□□□□ -0.34
CPSF6-204ENST00000547486 CDHR3Q6ZTQ4 885 aa12.93□□□□□ -0.34
CPSF6-204ENST00000547486 ZNF534Q76KX8 674 aa12.93□□□□□ -0.34
CPSF6-204ENST00000547486 LINC00523Q86TU6 105 aa12.93□□□□□ -0.34
CPSF6-204ENST00000547486 SLC13A5Q86YT5 568 aaPredicted RBP12.93□□□□□ -0.34
CPSF6-204ENST00000547486 APLFQ8IW19 511 aaPredicted RBP12.93□□□□□ -0.34
CPSF6-204ENST00000547486 DSELQ8IZU8 1212 aa12.93□□□□□ -0.34
CPSF6-204ENST00000547486 DNAAF3Q8N9W5 541 aa12.93□□□□□ -0.34
CPSF6-204ENST00000547486 FLVCR1-AS1Q8TAF5 88 aa12.93□□□□□ -0.34
CPSF6-204ENST00000547486 ELMO1Q92556 727 aa12.93□□□□□ -0.34
CPSF6-204ENST00000547486 LRFN5Q96NI6 719 aa12.93□□□□□ -0.34
CPSF6-204ENST00000547486 ALS2CR12Q96Q35 445 aa12.93□□□□□ -0.34
CPSF6-204ENST00000547486 FAM60AQ9NP50 221 aa12.93□□□□□ -0.34
CPSF6-204ENST00000547486 PCMTD2Q9NV79 361 aa12.93□□□□□ -0.34
CPSF6-204ENST00000547486 ACTR10Q9NZ32 417 aa12.93□□□□□ -0.34
CPSF6-204ENST00000547486 RELNP78509 3460 aa12.93□□□□□ -0.34
CPSF6-204ENST00000547486 UBR5O95071 2799 aaPredicted RBP12.92□□□□□ -0.34
CPSF6-204ENST00000547486 C2orf74A8MZ97 194 aa12.92□□□□□ -0.34
CPSF6-204ENST00000547486 LIN7AO14910 233 aaPredicted RBP12.92□□□□□ -0.34
CPSF6-204ENST00000547486 RFPL1O75677 317 aa12.92□□□□□ -0.34
CPSF6-204ENST00000547486 GOT2P00505 430 aaKnown RBP12.92□□□□□ -0.34
CPSF6-204ENST00000547486 IFNB1P01574 187 aa12.92□□□□□ -0.34
CPSF6-204ENST00000547486 KLK3P07288 261 aaPredicted RBP12.92□□□□□ -0.34
CPSF6-204ENST00000547486 CTSBP07858 339 aa12.92□□□□□ -0.34
CPSF6-204ENST00000547486 GSTM1P09488 218 aa12.92□□□□□ -0.34
CPSF6-204ENST00000547486 MSL3P1P0C860 447 aa12.92□□□□□ -0.34
CPSF6-204ENST00000547486 GSTM4Q03013 218 aa12.92□□□□□ -0.34
CPSF6-204ENST00000547486 CDH17Q12864 832 aa12.92□□□□□ -0.34
CPSF6-204ENST00000547486 KLRB1Q12918 225 aa12.92□□□□□ -0.34
CPSF6-204ENST00000547486 CHAF1BQ13112 559 aa12.92□□□□□ -0.34
CPSF6-204ENST00000547486 SEMA3AQ14563 771 aa12.92□□□□□ -0.34
CPSF6-204ENST00000547486 ZIC1Q15915 447 aa12.92□□□□□ -0.34
CPSF6-204ENST00000547486 TSTD2Q5T7W7 516 aa12.92□□□□□ -0.34
CPSF6-204ENST00000547486 CPZQ66K79 652 aa12.92□□□□□ -0.34
CPSF6-204ENST00000547486 ZNF449Q6P9G9 518 aa12.92□□□□□ -0.34
CPSF6-204ENST00000547486 PACS1Q6VY07 963 aa12.92□□□□□ -0.34
CPSF6-204ENST00000547486 ASB18Q6ZVZ8 466 aa12.92□□□□□ -0.34
CPSF6-204ENST00000547486 SYVN1Q86TM6 617 aa12.92□□□□□ -0.34
CPSF6-204ENST00000547486 TRIM73Q86UV7 250 aa12.92□□□□□ -0.34
CPSF6-204ENST00000547486 TXLNBQ8N3L3 684 aa12.92□□□□□ -0.34
CPSF6-204ENST00000547486 ADAMTS17Q8TE56 1095 aa12.92□□□□□ -0.34
CPSF6-204ENST00000547486 CPT1BQ92523 772 aa12.92□□□□□ -0.34
CPSF6-204ENST00000547486 CLIP3Q96DZ5 547 aa12.92□□□□□ -0.34
CPSF6-204ENST00000547486 OR2A14Q96R47 310 aa12.92□□□□□ -0.34
CPSF6-204ENST00000547486 CASS4Q9NQ75 786 aa12.92□□□□□ -0.34
CPSF6-204ENST00000547486 SPHK1Q9NYA1 384 aa12.92□□□□□ -0.34
CPSF6-204ENST00000547486 GUCA1BQ9UMX6 200 aa12.92□□□□□ -0.34
CPSF6-204ENST00000547486 ZNF148Q9UQR1 794 aa12.92□□□□□ -0.34
CPSF6-204ENST00000547486 PLAAQ9Y263 795 aa12.92□□□□□ -0.34
CPSF6-204ENST00000547486 HEATR9A2RTY3 570 aa12.91□□□□□ -0.34
CPSF6-204ENST00000547486 ERI2A8K979 691 aaKnown RBP12.91□□□□□ -0.34
CPSF6-204ENST00000547486 ZNF749O43361 778 aa12.91□□□□□ -0.34
CPSF6-204ENST00000547486 UGT2B7P16662 529 aa12.91□□□□□ -0.34
CPSF6-204ENST00000547486 ADRA1DP25100 572 aa12.91□□□□□ -0.34
CPSF6-204ENST00000547486 CCR7P32248 378 aa12.91□□□□□ -0.34
CPSF6-204ENST00000547486 GSDMDP57764 484 aa12.91□□□□□ -0.34
CPSF6-204ENST00000547486 ACVR1Q04771 509 aa12.91□□□□□ -0.34
CPSF6-204ENST00000547486 SIX1Q15475 284 aaPredicted RBP12.91□□□□□ -0.34
CPSF6-204ENST00000547486 KCTD19Q17RG1 926 aaPredicted RBP12.91□□□□□ -0.34
CPSF6-204ENST00000547486 PTCHD3Q3KNS1 767 aa12.91□□□□□ -0.34
CPSF6-204ENST00000547486 MEI1Q5TIA1 1274 aa12.91□□□□□ -0.34
CPSF6-204ENST00000547486 SPESP1Q6UW49 350 aa12.91□□□□□ -0.34
CPSF6-204ENST00000547486 PPP1R21Q6ZMI0 780 aa12.91□□□□□ -0.34
CPSF6-204ENST00000547486 VRK3Q8IV63 474 aa12.91□□□□□ -0.34
CPSF6-204ENST00000547486 ENDOVQ8N8Q3 282 aaKnown RBP12.91□□□□□ -0.34
CPSF6-204ENST00000547486 THAP4Q8WY91 577 aa12.91□□□□□ -0.34
CPSF6-204ENST00000547486 RANBP9Q96S59 729 aa12.91□□□□□ -0.34
CPSF6-204ENST00000547486 NLNQ9BYT8 704 aa12.91□□□□□ -0.34
CPSF6-204ENST00000547486 ACTR5Q9H9F9 607 aaPredicted RBP12.91□□□□□ -0.34
CPSF6-204ENST00000547486 FANCEQ9HB96 536 aa12.91□□□□□ -0.34
CPSF6-204ENST00000547486 SYTL2Q9HCH5 934 aa12.91□□□□□ -0.34
CPSF6-204ENST00000547486 CHRAC1Q9NRG0 131 aa12.91□□□□□ -0.34
CPSF6-204ENST00000547486 RAB6BQ9NRW1 208 aa12.91□□□□□ -0.34
CPSF6-204ENST00000547486 SERTAD3Q9UJW9 196 aa12.91□□□□□ -0.34
CPSF6-204ENST00000547486 PLAGL1Q9UM63 463 aa12.91□□□□□ -0.34
CPSF6-204ENST00000547486 ASF1AQ9Y294 204 aa12.91□□□□□ -0.34
CPSF6-204ENST00000547486 TDRKHQ9Y2W6 561 aaKnown RBP12.91□□□□□ -0.34
CPSF6-204ENST00000547486 ARGFXA6NJG6 315 aa12.9□□□□□ -0.34
CPSF6-204ENST00000547486 IQCF5A8MTL0 148 aa12.9□□□□□ -0.34
CPSF6-204ENST00000547486 E7EVH7 732 aa12.9□□□□□ -0.34
CPSF6-204ENST00000547486 H3BMH7 237 aa12.9□□□□□ -0.34
CPSF6-204ENST00000547486 FTH1P02794 183 aa12.9□□□□□ -0.34
CPSF6-204ENST00000547486 CHRM5P08912 532 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms