RNA–Protein interactions for RNA: ENST00000547148.5

PFKM-208, Transcript of phosphofructokinase, muscle, human

TSL 3

Gene PFKM, Length 775 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PFKM-208	ENST00000547148	SP140	Q13342	867 aa		11.63	□□□□□ -0.55
PFKM-208	ENST00000547148	OR4D1	Q15615	310 aa		11.63	□□□□□ -0.55
PFKM-208	ENST00000547148	TSN	Q15631	228 aa	Known RBP	11.63	□□□□□ -0.55
PFKM-208	ENST00000547148	RPE65	Q16518	533 aa		11.63	□□□□□ -0.55
PFKM-208	ENST00000547148	CSRP2	Q16527	193 aa		11.63	□□□□□ -0.55
PFKM-208	ENST00000547148	PPP1R3A	Q16821	1122 aa		11.63	□□□□□ -0.55
PFKM-208	ENST00000547148	FAM83E	Q2M2I3	478 aa		11.63	□□□□□ -0.55
PFKM-208	ENST00000547148	TSNAXIP1	Q2TAA8	658 aa		11.63	□□□□□ -0.55
PFKM-208	ENST00000547148	DEFB133	Q30KQ1	61 aa		11.63	□□□□□ -0.55
PFKM-208	ENST00000547148	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	11.63	□□□□□ -0.55
PFKM-208	ENST00000547148	DUS1L	Q6P1R4	473 aa	Known RBP	11.63	□□□□□ -0.55
PFKM-208	ENST00000547148	IYD	Q6PHW0	289 aa		11.63	□□□□□ -0.55
PFKM-208	ENST00000547148	UNC5D	Q6UXZ4	953 aa		11.63	□□□□□ -0.55
PFKM-208	ENST00000547148	ISCA2	Q86U28	154 aa		11.63	□□□□□ -0.55
PFKM-208	ENST00000547148	C17orf82	Q86X59	251 aa	Predicted RBP	11.63	□□□□□ -0.55
PFKM-208	ENST00000547148	NAGS	Q8N159	534 aa		11.63	□□□□□ -0.55
PFKM-208	ENST00000547148	GOLGA6L1	Q8N7Z2	621 aa		11.63	□□□□□ -0.55
PFKM-208	ENST00000547148	FAM46D	Q8NEK8	389 aa		11.63	□□□□□ -0.55
PFKM-208	ENST00000547148	SKA2	Q8WVK7	121 aa	Predicted RBP	11.63	□□□□□ -0.55
PFKM-208	ENST00000547148	PATE1	Q8WXA2	126 aa		11.63	□□□□□ -0.55
PFKM-208	ENST00000547148	ASB11	Q8WXH4	323 aa		11.63	□□□□□ -0.55
PFKM-208	ENST00000547148	DLG3	Q92796	817 aa		11.63	□□□□□ -0.55
PFKM-208	ENST00000547148	SMC6	Q96SB8	1091 aa		11.63	□□□□□ -0.55
PFKM-208	ENST00000547148	TFB2M	Q9H5Q4	396 aa	Known RBP	11.63	□□□□□ -0.55
PFKM-208	ENST00000547148	NMRAL1	Q9HBL8	299 aa		11.63	□□□□□ -0.55
PFKM-208	ENST00000547148	SEMA4G	Q9NTN9	838 aa		11.63	□□□□□ -0.55
PFKM-208	ENST00000547148	DNAAF2	Q9NVR5	837 aa	Known RBP	11.63	□□□□□ -0.55
PFKM-208	ENST00000547148	ZNF624	Q9P2J8	865 aa	Predicted RBP	11.63	□□□□□ -0.55
PFKM-208	ENST00000547148	NCDN	Q9UBB6	729 aa		11.63	□□□□□ -0.55
PFKM-208	ENST00000547148	EMCN	Q9ULC0	261 aa		11.63	□□□□□ -0.55
PFKM-208	ENST00000547148	CFAP20	Q9Y6A4	193 aa	Known RBP	11.63	□□□□□ -0.55
PFKM-208	ENST00000547148	ARHGEF33	A8MVX0	844 aa		11.62	□□□□□ -0.55
PFKM-208	ENST00000547148	HMGB1P1	B2RPK0	211 aa	Predicted RBP	11.62	□□□□□ -0.55
PFKM-208	ENST00000547148		B4DGG1	531 aa		11.62	□□□□□ -0.55
PFKM-208	ENST00000547148		H3BQF6	201 aa		11.62	□□□□□ -0.55
PFKM-208	ENST00000547148	IFRD1	O00458	451 aa	Predicted RBP	11.62	□□□□□ -0.55
PFKM-208	ENST00000547148	SLC16A5	O15375	505 aa		11.62	□□□□□ -0.55
PFKM-208	ENST00000547148	FFAR2	O15552	330 aa		11.62	□□□□□ -0.55
PFKM-208	ENST00000547148	NOBOX	O60393	691 aa		11.62	□□□□□ -0.55
PFKM-208	ENST00000547148	SPAG7	O75391	227 aa		11.62	□□□□□ -0.55
PFKM-208	ENST00000547148	C8G	P07360	202 aa		11.62	□□□□□ -0.55
PFKM-208	ENST00000547148	ANXA6	P08133	673 aa		11.62	□□□□□ -0.55
PFKM-208	ENST00000547148	GSTA1	P08263	222 aa		11.62	□□□□□ -0.55
PFKM-208	ENST00000547148	ADRB1	P08588	477 aa		11.62	□□□□□ -0.55
PFKM-208	ENST00000547148	TFEB	P19484	476 aa		11.62	□□□□□ -0.55
PFKM-208	ENST00000547148	HAL	P42357	657 aa		11.62	□□□□□ -0.55
PFKM-208	ENST00000547148	MAPK9	P45984	424 aa		11.62	□□□□□ -0.55
PFKM-208	ENST00000547148	BDKRB1	P46663	353 aa		11.62	□□□□□ -0.55
PFKM-208	ENST00000547148	CCT5	P48643	541 aa		11.62	□□□□□ -0.55
PFKM-208	ENST00000547148	UBE2I	P63279	158 aa	Known RBP	11.62	□□□□□ -0.55
PFKM-208	ENST00000547148	ACAP2	Q15057	778 aa		11.62	□□□□□ -0.55
PFKM-208	ENST00000547148	PHKG1	Q16816	387 aa		11.62	□□□□□ -0.55
PFKM-208	ENST00000547148	TECRL	Q5HYJ1	363 aa		11.62	□□□□□ -0.55
PFKM-208	ENST00000547148	C6orf132	Q5T0Z8	1188 aa		11.62	□□□□□ -0.55
PFKM-208	ENST00000547148	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	11.62	□□□□□ -0.55
PFKM-208	ENST00000547148	OGFOD3	Q6PK18	319 aa		11.62	□□□□□ -0.55
PFKM-208	ENST00000547148	ADAMTSL2	Q86TH1	951 aa		11.62	□□□□□ -0.55
PFKM-208	ENST00000547148	GATAD2A	Q86YP4	633 aa		11.62	□□□□□ -0.55
PFKM-208	ENST00000547148	SFRP1	Q8N474	314 aa		11.62	□□□□□ -0.55
PFKM-208	ENST00000547148	TMEM151A	Q8N4L1	468 aa		11.62	□□□□□ -0.55
PFKM-208	ENST00000547148	KY	Q8NBH2	561 aa		11.62	□□□□□ -0.55
PFKM-208	ENST00000547148	CFAP61	Q8NHU2	1237 aa		11.62	□□□□□ -0.55
PFKM-208	ENST00000547148	RHEBL1	Q8TAI7	183 aa		11.62	□□□□□ -0.55
PFKM-208	ENST00000547148	SLC37A2	Q8TED4	501 aa		11.62	□□□□□ -0.55
PFKM-208	ENST00000547148	ZDHHC1	Q8WTX9	485 aa		11.62	□□□□□ -0.55
PFKM-208	ENST00000547148	TFG	Q92734	400 aa	Predicted RBP	11.62	□□□□□ -0.55
PFKM-208	ENST00000547148	KIAA1191	Q96A73	305 aa		11.62	□□□□□ -0.55
PFKM-208	ENST00000547148	ALKBH8	Q96BT7	664 aa	Known RBP	11.62	□□□□□ -0.55
PFKM-208	ENST00000547148	C12orf66	Q96MD2	445 aa		11.62	□□□□□ -0.55
PFKM-208	ENST00000547148	SLC12A9	Q9BXP2	914 aa		11.62	□□□□□ -0.55
PFKM-208	ENST00000547148	RXFP3	Q9NSD7	469 aa		11.62	□□□□□ -0.55
PFKM-208	ENST00000547148	IMP3	Q9NV31	184 aa	Known RBP	11.62	□□□□□ -0.55
PFKM-208	ENST00000547148	NLGN3	Q9NZ94	848 aa		11.62	□□□□□ -0.55
PFKM-208	ENST00000547148	TMEM216	Q9P0N5	145 aa		11.62	□□□□□ -0.55
PFKM-208	ENST00000547148	XPR1	Q9UBH6	696 aa		11.62	□□□□□ -0.55
PFKM-208	ENST00000547148	DCDC2	Q9UHG0	476 aa		11.62	□□□□□ -0.55
PFKM-208	ENST00000547148	CDV3	Q9UKY7	258 aa	Known RBP	11.62	□□□□□ -0.55
PFKM-208	ENST00000547148	DOLK	Q9UPQ8	538 aa		11.62	□□□□□ -0.55
PFKM-208	ENST00000547148	SPTBN2	O15020	2390 aa		11.62	□□□□□ -0.55
PFKM-208	ENST00000547148	TMEM131	Q92545	1883 aa		11.61	□□□□□ -0.55
PFKM-208	ENST00000547148	USP24	Q9UPU5	2620 aa		11.61	□□□□□ -0.55
PFKM-208	ENST00000547148	KIR2DS5	A0A0G2JLQ3	304 aa		11.61	□□□□□ -0.55
PFKM-208	ENST00000547148	PRAMEF33	A0A0G2JMD5	474 aa		11.61	□□□□□ -0.55
PFKM-208	ENST00000547148		A0A0G2JNG1	304 aa		11.61	□□□□□ -0.55
PFKM-208	ENST00000547148	CCDC189	A1A4V9	331 aa		11.61	□□□□□ -0.55
PFKM-208	ENST00000547148	KRT87P	A6NCN2	255 aa		11.61	□□□□□ -0.55
PFKM-208	ENST00000547148	NEMP2	A6NFY4	417 aa		11.61	□□□□□ -0.55
PFKM-208	ENST00000547148	OR5K4	A6NMS3	321 aa		11.61	□□□□□ -0.55
PFKM-208	ENST00000547148	KIR2DS3	K7RE56	304 aa		11.61	□□□□□ -0.55
PFKM-208	ENST00000547148	TK2	O00142	265 aa		11.61	□□□□□ -0.55
PFKM-208	ENST00000547148	TRIM38	O00635	465 aa		11.61	□□□□□ -0.55
PFKM-208	ENST00000547148	CDX4	O14627	284 aa	Predicted RBP	11.61	□□□□□ -0.55
PFKM-208	ENST00000547148	PRPF4	O43172	522 aa	Known RBP eCLIP	11.61	□□□□□ -0.55
PFKM-208	ENST00000547148	KERA	O60938	352 aa		11.61	□□□□□ -0.55
PFKM-208	ENST00000547148	C1orf105	O95561	183 aa		11.61	□□□□□ -0.55
PFKM-208	ENST00000547148	ENO2	P09104	434 aa	Predicted RBP	11.61	□□□□□ -0.55
PFKM-208	ENST00000547148	SBK3	P0C264	359 aa		11.61	□□□□□ -0.55
PFKM-208	ENST00000547148	SLC2A4	P14672	509 aa		11.61	□□□□□ -0.55
PFKM-208	ENST00000547148	XRCC1	P18887	633 aa	Predicted RBP	11.61	□□□□□ -0.55
PFKM-208	ENST00000547148	KCNC1	P48547	511 aa		11.61	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms