RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 TRIT1Q9H3H1 467 aaKnown RBP15.46■□□□□ 0.07
TRAFD1-203ENST00000547063 MVB12BQ9H7P6 319 aa15.46■□□□□ 0.07
TRAFD1-203ENST00000547063 CD274Q9NZQ7 290 aa15.46■□□□□ 0.07
TRAFD1-203ENST00000547063 TAAR2Q9P1P5 351 aa15.46■□□□□ 0.07
TRAFD1-203ENST00000547063 POLG2Q9UHN1 485 aa15.46■□□□□ 0.07
TRAFD1-203ENST00000547063 PSMD13Q9UNM6 376 aa15.46■□□□□ 0.07
TRAFD1-203ENST00000547063 CSNK1G3Q9Y6M4 447 aa15.46■□□□□ 0.07
TRAFD1-203ENST00000547063 COLEC10Q9Y6Z7 277 aa15.46■□□□□ 0.07
TRAFD1-203ENST00000547063 R4GN57 208 aa15.46■□□□□ 0.07
TRAFD1-203ENST00000547063 CACNA1EQ15878 2313 aa15.46■□□□□ 0.07
TRAFD1-203ENST00000547063 KIR2DS5A0A0G2JLQ3 304 aa15.45■□□□□ 0.06
TRAFD1-203ENST00000547063 A0A0G2JNG1 304 aa15.45■□□□□ 0.06
TRAFD1-203ENST00000547063 NEMP2A6NFY4 417 aa15.45■□□□□ 0.06
TRAFD1-203ENST00000547063 SUPT3HB4E1H0 165 aa15.45■□□□□ 0.06
TRAFD1-203ENST00000547063 KIR2DS3K7RE56 304 aa15.45■□□□□ 0.06
TRAFD1-203ENST00000547063 SCAMP1O15126 338 aa15.45■□□□□ 0.06
TRAFD1-203ENST00000547063 AQP9O43315 295 aa15.45■□□□□ 0.06
TRAFD1-203ENST00000547063 H2AFYO75367 372 aaKnown RBP15.45■□□□□ 0.06
TRAFD1-203ENST00000547063 SUPT3HO75486 399 aa15.45■□□□□ 0.06
TRAFD1-203ENST00000547063 ANXA5P08758 320 aa15.45■□□□□ 0.06
TRAFD1-203ENST00000547063 NEFHP12036 1026 aa15.45■□□□□ 0.06
TRAFD1-203ENST00000547063 GFAPP14136 432 aa15.45■□□□□ 0.06
TRAFD1-203ENST00000547063 PI4KAP42356 2102 aa15.45■□□□□ 0.06
TRAFD1-203ENST00000547063 KRT33BQ14525 404 aa15.45■□□□□ 0.06
TRAFD1-203ENST00000547063 KIR2DS5Q14953 304 aa15.45■□□□□ 0.06
TRAFD1-203ENST00000547063 PPP1R3AQ16821 1122 aa15.45■□□□□ 0.06
TRAFD1-203ENST00000547063 ZNF423Q2M1K9 1284 aa15.45■□□□□ 0.06
TRAFD1-203ENST00000547063 TRIM61Q5EBN2 209 aa15.45■□□□□ 0.06
TRAFD1-203ENST00000547063 SULT1C3Q6IMI6 304 aa15.45■□□□□ 0.06
TRAFD1-203ENST00000547063 TAX1BP1Q86VP1 789 aa15.45■□□□□ 0.06
TRAFD1-203ENST00000547063 NRROSQ86YC3 692 aa15.45■□□□□ 0.06
TRAFD1-203ENST00000547063 NUDCD3Q8IVD9 361 aa15.45■□□□□ 0.06
TRAFD1-203ENST00000547063 DCUN1D3Q8IWE4 304 aa15.45■□□□□ 0.06
TRAFD1-203ENST00000547063 TCAIMQ8N3R3 496 aa15.45■□□□□ 0.06
TRAFD1-203ENST00000547063 TMEM151AQ8N4L1 468 aa15.45■□□□□ 0.06
TRAFD1-203ENST00000547063 RAB42Q8N4Z0 105 aa15.45■□□□□ 0.06
TRAFD1-203ENST00000547063 MDM1Q8TC05 714 aa15.45■□□□□ 0.06
TRAFD1-203ENST00000547063 LMX1AQ8TE12 382 aa15.45■□□□□ 0.06
TRAFD1-203ENST00000547063 ATL1Q8WXF7 558 aa15.45■□□□□ 0.06
TRAFD1-203ENST00000547063 RAD51AP1Q96B01 352 aa15.45■□□□□ 0.06
TRAFD1-203ENST00000547063 RMDN2Q96LZ7 410 aa15.45■□□□□ 0.06
TRAFD1-203ENST00000547063 CCDC138Q96M89 665 aa15.45■□□□□ 0.06
TRAFD1-203ENST00000547063 KCNH6Q9H252 994 aa15.45■□□□□ 0.06
TRAFD1-203ENST00000547063 TCEAL2Q9H3H9 227 aaPredicted RBP15.45■□□□□ 0.06
TRAFD1-203ENST00000547063 C12orf65Q9H3J6 166 aaKnown RBP15.45■□□□□ 0.06
TRAFD1-203ENST00000547063 CAPN10Q9HC96 672 aa15.45■□□□□ 0.06
TRAFD1-203ENST00000547063 PRDM8Q9NQV8 689 aa15.45■□□□□ 0.06
TRAFD1-203ENST00000547063 ARL15Q9NXU5 204 aa15.45■□□□□ 0.06
TRAFD1-203ENST00000547063 TBC1D29Q9UFV1 150 aa15.45■□□□□ 0.06
TRAFD1-203ENST00000547063 ADAMTS6Q9UKP5 1117 aa15.45■□□□□ 0.06
TRAFD1-203ENST00000547063 PDE10AQ9Y233 779 aa15.45■□□□□ 0.06
TRAFD1-203ENST00000547063 SNX11Q9Y5W9 270 aa15.45■□□□□ 0.06
TRAFD1-203ENST00000547063 SDK1Q7Z5N4 2213 aa15.45■□□□□ 0.06
TRAFD1-203ENST00000547063 LMO7DNF2Z398 122 aa15.44■□□□□ 0.06
TRAFD1-203ENST00000547063 G3V2L1 256 aa15.44■□□□□ 0.06
TRAFD1-203ENST00000547063 FFAR2O15552 330 aa15.44■□□□□ 0.06
TRAFD1-203ENST00000547063 PIAS2O75928 621 aa15.44■□□□□ 0.06
TRAFD1-203ENST00000547063 IPO13O94829 963 aaKnown RBP15.44■□□□□ 0.06
TRAFD1-203ENST00000547063 C1orf105O95561 183 aa15.44■□□□□ 0.06
TRAFD1-203ENST00000547063 CER1O95813 267 aa15.44■□□□□ 0.06
TRAFD1-203ENST00000547063 BPGMP07738 259 aa15.44■□□□□ 0.06
TRAFD1-203ENST00000547063 ANXA6P08133 673 aa15.44■□□□□ 0.06
TRAFD1-203ENST00000547063 MTHFD1P11586 935 aaKnown RBP15.44■□□□□ 0.06
TRAFD1-203ENST00000547063 HSD17B2P37059 387 aa15.44■□□□□ 0.06
TRAFD1-203ENST00000547063 MPLP40238 635 aa15.44■□□□□ 0.06
TRAFD1-203ENST00000547063 HNMTP50135 292 aa15.44■□□□□ 0.06
TRAFD1-203ENST00000547063 ALDH18A1P54886 795 aaKnown RBP15.44■□□□□ 0.06
TRAFD1-203ENST00000547063 WDR4P57081 412 aaKnown RBP15.44■□□□□ 0.06
TRAFD1-203ENST00000547063 NFKB2Q00653 900 aa15.44■□□□□ 0.06
TRAFD1-203ENST00000547063 PCLAFQ15004 111 aa15.44■□□□□ 0.06
TRAFD1-203ENST00000547063 PHKG1Q16816 387 aa15.44■□□□□ 0.06
TRAFD1-203ENST00000547063 METTL2BQ6P1Q9 378 aaKnown RBP15.44■□□□□ 0.06
TRAFD1-203ENST00000547063 FBXO39Q8N4B4 442 aa15.44■□□□□ 0.06
TRAFD1-203ENST00000547063 PDPRQ8NCN5 879 aa15.44■□□□□ 0.06
TRAFD1-203ENST00000547063 ZNF548Q8NEK5 533 aaPredicted RBP15.44■□□□□ 0.06
TRAFD1-203ENST00000547063 SPDYE1Q8NFV5 336 aaPredicted RBP15.44■□□□□ 0.06
TRAFD1-203ENST00000547063 OR5K2Q8NHB8 316 aa15.44■□□□□ 0.06
TRAFD1-203ENST00000547063 CCL4L1Q8NHW4 92 aa15.44■□□□□ 0.06
TRAFD1-203ENST00000547063 PPP1R14CQ8TAE6 165 aa15.44■□□□□ 0.06
TRAFD1-203ENST00000547063 RAB3IL1Q8TBN0 382 aa15.44■□□□□ 0.06
TRAFD1-203ENST00000547063 ZFPM2Q8WW38 1151 aa15.44■□□□□ 0.06
TRAFD1-203ENST00000547063 EXT2Q93063 718 aa15.44■□□□□ 0.06
TRAFD1-203ENST00000547063 CXorf40BQ96DE9 158 aa15.44■□□□□ 0.06
TRAFD1-203ENST00000547063 INSM2Q96T92 566 aaPredicted RBP15.44■□□□□ 0.06
TRAFD1-203ENST00000547063 EGFL8Q99944 293 aa15.44■□□□□ 0.06
TRAFD1-203ENST00000547063 OXSMQ9NWU1 459 aa15.44■□□□□ 0.06
TRAFD1-203ENST00000547063 IKZF3Q9UKT9 509 aa15.44■□□□□ 0.06
TRAFD1-203ENST00000547063 TNPO3Q9Y5L0 923 aaKnown RBP15.44■□□□□ 0.06
TRAFD1-203ENST00000547063 ST14Q9Y5Y6 855 aa15.44■□□□□ 0.06
TRAFD1-203ENST00000547063 A6NCN8 305 aa15.43■□□□□ 0.06
TRAFD1-203ENST00000547063 ZNF839A8K0R7 811 aa15.43■□□□□ 0.06
TRAFD1-203ENST00000547063 ARHGEF33A8MVX0 844 aa15.43■□□□□ 0.06
TRAFD1-203ENST00000547063 STX16-NPEPL1H3BU86 382 aa15.43■□□□□ 0.06
TRAFD1-203ENST00000547063 UBXN8O00124 270 aa15.43■□□□□ 0.06
TRAFD1-203ENST00000547063 ARHGAP33O14559 1287 aa15.43■□□□□ 0.06
TRAFD1-203ENST00000547063 STX16O14662 325 aa15.43■□□□□ 0.06
TRAFD1-203ENST00000547063 KHNYNO15037 678 aaKnown RBP15.43■□□□□ 0.06
TRAFD1-203ENST00000547063 KLK8O60259 260 aa15.43■□□□□ 0.06
TRAFD1-203ENST00000547063 DLX3O60479 287 aa15.43■□□□□ 0.06
TRAFD1-203ENST00000547063 TRIM13O60858 407 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms