RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 PHYKPLQ8IUZ5 450 aa12.45□□□□□ -0.42
SCAF11-209ENST00000547018 CENPKQ9BS16 269 aa12.45□□□□□ -0.42
SCAF11-209ENST00000547018 ALG2Q9H553 416 aa12.45□□□□□ -0.42
SCAF11-209ENST00000547018 PARVBQ9HBI1 364 aa12.45□□□□□ -0.42
SCAF11-209ENST00000547018 SDR39U1Q9NRG7 319 aaPredicted RBP12.45□□□□□ -0.42
SCAF11-209ENST00000547018 SAGE1Q9NXZ1 904 aa12.45□□□□□ -0.42
SCAF11-209ENST00000547018 STOML2Q9UJZ1 356 aa12.45□□□□□ -0.42
SCAF11-209ENST00000547018 TMPRSS11EQ9UL52 423 aa12.45□□□□□ -0.42
SCAF11-209ENST00000547018 LINC01553A4QN01 128 aa12.45□□□□□ -0.42
SCAF11-209ENST00000547018 XYLBO75191 536 aa12.45□□□□□ -0.42
SCAF11-209ENST00000547018 MAP4P27816 1152 aaKnown RBP12.45□□□□□ -0.42
SCAF11-209ENST00000547018 ERVK-8P63133 956 aa12.45□□□□□ -0.42
SCAF11-209ENST00000547018 HERC3Q15034 1050 aa12.45□□□□□ -0.42
SCAF11-209ENST00000547018 C9orf50Q5SZB4 431 aa12.45□□□□□ -0.42
SCAF11-209ENST00000547018 NANOGP8Q6NSW7 305 aa12.45□□□□□ -0.42
SCAF11-209ENST00000547018 FBXO46Q6PJ61 603 aaPredicted RBP12.45□□□□□ -0.42
SCAF11-209ENST00000547018 TMEM220Q6QAJ8 160 aa12.45□□□□□ -0.42
SCAF11-209ENST00000547018 TRMT11Q7Z4G4 463 aaKnown RBP12.45□□□□□ -0.42
SCAF11-209ENST00000547018 SYTL1Q8IYJ3 562 aa12.45□□□□□ -0.42
SCAF11-209ENST00000547018 CFAP206Q8IYR0 622 aa12.45□□□□□ -0.42
SCAF11-209ENST00000547018 KIAA2013Q8IYS2 634 aa12.45□□□□□ -0.42
SCAF11-209ENST00000547018 CLEC4FQ8N1N0 589 aa12.45□□□□□ -0.42
SCAF11-209ENST00000547018 OR10A6Q8NH74 314 aa12.45□□□□□ -0.42
SCAF11-209ENST00000547018 RHBDF1Q96CC6 855 aa12.45□□□□□ -0.42
SCAF11-209ENST00000547018 RSPRY1Q96DX4 576 aa12.45□□□□□ -0.42
SCAF11-209ENST00000547018 TMEM79Q9BSE2 394 aa12.45□□□□□ -0.42
SCAF11-209ENST00000547018 OR2AG1Q9H205 316 aa12.45□□□□□ -0.42
SCAF11-209ENST00000547018 NANOGQ9H9S0 305 aa12.45□□□□□ -0.42
SCAF11-209ENST00000547018 WBP1LQ9NX94 342 aa12.45□□□□□ -0.42
SCAF11-209ENST00000547018 CNOT6Q9ULM6 557 aaKnown RBP12.45□□□□□ -0.42
SCAF11-209ENST00000547018 TMEM98Q9Y2Y6 226 aa12.45□□□□□ -0.42
SCAF11-209ENST00000547018 U3KQV3 271 aa12.45□□□□□ -0.42
SCAF11-209ENST00000547018 DHRS12A0PJE2 317 aa12.45□□□□□ -0.42
SCAF11-209ENST00000547018 C16orf96A6NNT2 1141 aa12.45□□□□□ -0.42
SCAF11-209ENST00000547018 PRRT4C9JH25 899 aa12.45□□□□□ -0.42
SCAF11-209ENST00000547018 LATO43561 262 aa12.45□□□□□ -0.42
SCAF11-209ENST00000547018 CPSF4O95639 269 aaKnown RBP12.45□□□□□ -0.42
SCAF11-209ENST00000547018 ABCB1P08183 1280 aaPredicted RBP12.45□□□□□ -0.42
SCAF11-209ENST00000547018 TACR1P25103 407 aa12.45□□□□□ -0.42
SCAF11-209ENST00000547018 PBX2P40425 430 aa12.45□□□□□ -0.42
SCAF11-209ENST00000547018 POLR2LP62875 67 aaKnown RBP12.45□□□□□ -0.42
SCAF11-209ENST00000547018 TRAF3Q13114 568 aa12.45□□□□□ -0.42
SCAF11-209ENST00000547018 LAPTM5Q13571 262 aa12.45□□□□□ -0.42
SCAF11-209ENST00000547018 RAET1GQ6H3X3 334 aa12.45□□□□□ -0.42
SCAF11-209ENST00000547018 KRT80Q6KB66 452 aa12.45□□□□□ -0.42
SCAF11-209ENST00000547018 SUSD1Q6UWL2 747 aa12.45□□□□□ -0.42
SCAF11-209ENST00000547018 TMEM159Q96B96 161 aa12.45□□□□□ -0.42
SCAF11-209ENST00000547018 HTATIP2Q9BUP3 242 aa12.45□□□□□ -0.42
SCAF11-209ENST00000547018 CD244Q9BZW8 370 aa12.45□□□□□ -0.42
SCAF11-209ENST00000547018 BATF3Q9NR55 127 aa12.45□□□□□ -0.42
SCAF11-209ENST00000547018 PLAGL1Q9UM63 463 aa12.45□□□□□ -0.42
SCAF11-209ENST00000547018 MAGED1Q9Y5V3 778 aaPredicted RBP12.45□□□□□ -0.42
SCAF11-209ENST00000547018 C15orf38-AP3S2A0A0A6YYH1 394 aa12.44□□□□□ -0.42
SCAF11-209ENST00000547018 K7EPI3 171 aa12.44□□□□□ -0.42
SCAF11-209ENST00000547018 FXYD1O00168 92 aa12.44□□□□□ -0.42
SCAF11-209ENST00000547018 STX16O14662 325 aa12.44□□□□□ -0.42
SCAF11-209ENST00000547018 ARPC2O15144 300 aa12.44□□□□□ -0.42
SCAF11-209ENST00000547018 SOCS5O75159 536 aa12.44□□□□□ -0.42
SCAF11-209ENST00000547018 C1QCP02747 245 aa12.44□□□□□ -0.42
SCAF11-209ENST00000547018 ATP1B2P14415 290 aaPredicted RBP12.44□□□□□ -0.42
SCAF11-209ENST00000547018 ADSLP30566 484 aaPredicted RBP12.44□□□□□ -0.42
SCAF11-209ENST00000547018 IRF8Q02556 426 aa12.44□□□□□ -0.42
SCAF11-209ENST00000547018 CHIT1Q13231 466 aa12.44□□□□□ -0.42
SCAF11-209ENST00000547018 CAMK1Q14012 370 aa12.44□□□□□ -0.42
SCAF11-209ENST00000547018 ELMSAN1Q6PJG2 1045 aa12.44□□□□□ -0.42
SCAF11-209ENST00000547018 ARPINQ7Z6K5 226 aa12.44□□□□□ -0.42
SCAF11-209ENST00000547018 CBR4Q8N4T8 237 aa12.44□□□□□ -0.42
SCAF11-209ENST00000547018 EFHD1Q9BUP0 239 aa12.44□□□□□ -0.42
SCAF11-209ENST00000547018 AIG1Q9NVV5 245 aa12.44□□□□□ -0.42
SCAF11-209ENST00000547018 KCTD5Q9NXV2 234 aa12.44□□□□□ -0.42
SCAF11-209ENST00000547018 RIMKLBQ9ULI2 386 aa12.44□□□□□ -0.42
SCAF11-209ENST00000547018 ZNF510Q9Y2H8 683 aa12.44□□□□□ -0.42
SCAF11-209ENST00000547018 TNPO3Q9Y5L0 923 aaKnown RBP12.44□□□□□ -0.42
SCAF11-209ENST00000547018 TRPM6Q9BX84 2022 aa12.44□□□□□ -0.42
SCAF11-209ENST00000547018 ASPDHA6ND91 283 aa12.44□□□□□ -0.42
SCAF11-209ENST00000547018 FADS2P1A8MWK0 482 aa12.44□□□□□ -0.42
SCAF11-209ENST00000547018 STATHP02808 62 aa12.44□□□□□ -0.42
SCAF11-209ENST00000547018 NTRK1P04629 796 aa12.44□□□□□ -0.42
SCAF11-209ENST00000547018 HSPA1AP0DMV8 641 aaKnown RBP12.44□□□□□ -0.42
SCAF11-209ENST00000547018 HSPA1BP0DMV9 641 aaKnown RBP12.44□□□□□ -0.42
SCAF11-209ENST00000547018 ZNF23P17027 643 aa12.44□□□□□ -0.42
SCAF11-209ENST00000547018 RFC2P35250 354 aa12.44□□□□□ -0.42
SCAF11-209ENST00000547018 MAPK8P45983 427 aa12.44□□□□□ -0.42
SCAF11-209ENST00000547018 IST1P53990 364 aa12.44□□□□□ -0.42
SCAF11-209ENST00000547018 GALNT1Q10472 559 aaPredicted RBP12.44□□□□□ -0.42
SCAF11-209ENST00000547018 XKR6Q5GH73 641 aa12.44□□□□□ -0.42
SCAF11-209ENST00000547018 RAVER1Q8IY67 606 aaKnown RBP12.44□□□□□ -0.42
SCAF11-209ENST00000547018 OFCC1Q8IZS5 231 aa12.44□□□□□ -0.42
SCAF11-209ENST00000547018 ZNF382Q96SR6 550 aa12.44□□□□□ -0.42
SCAF11-209ENST00000547018 ZBTB18Q99592 522 aa12.44□□□□□ -0.42
SCAF11-209ENST00000547018 GRIP2Q9C0E4 1043 aa12.44□□□□□ -0.42
SCAF11-209ENST00000547018 UBAP1Q9NZ09 502 aa12.44□□□□□ -0.42
SCAF11-209ENST00000547018 SUFUQ9UMX1 484 aa12.44□□□□□ -0.42
SCAF11-209ENST00000547018 HS3ST2Q9Y278 367 aa12.44□□□□□ -0.42
SCAF11-209ENST00000547018 DLGAP4Q9Y2H0 992 aa12.44□□□□□ -0.42
SCAF11-209ENST00000547018 TDRKHQ9Y2W6 561 aaKnown RBP12.44□□□□□ -0.42
SCAF11-209ENST00000547018 A0A1W2PP18 115 aa12.43□□□□□ -0.42
SCAF11-209ENST00000547018 CFAP99D6REC4 459 aa12.43□□□□□ -0.42
SCAF11-209ENST00000547018 H7C0S8 307 aa12.43□□□□□ -0.42
SCAF11-209ENST00000547018 PDYNP01213 254 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms