RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 CNTN4Q8IWV2 1026 aa6.23□□□□□ -1.41
PRKDC-211ENST00000546304 UNC5BQ8IZJ1 945 aa6.23□□□□□ -1.41
PRKDC-211ENST00000546304 EIF1ADQ8N9N8 165 aaKnown RBP6.23□□□□□ -1.41
PRKDC-211ENST00000546304 CALML6Q8TD86 181 aa6.23□□□□□ -1.41
PRKDC-211ENST00000546304 UBXN4Q92575 508 aa6.23□□□□□ -1.41
PRKDC-211ENST00000546304 TSACCQ96A04 125 aaPredicted RBP6.23□□□□□ -1.41
PRKDC-211ENST00000546304 DCUN1D1Q96GG9 259 aa6.23□□□□□ -1.41
PRKDC-211ENST00000546304 C9orf72Q96LT7 481 aa6.23□□□□□ -1.41
PRKDC-211ENST00000546304 TTC25Q96NG3 672 aa6.23□□□□□ -1.41
PRKDC-211ENST00000546304 TTC1Q99614 292 aa6.23□□□□□ -1.41
PRKDC-211ENST00000546304 BOCQ9BWV1 1114 aa6.23□□□□□ -1.41
PRKDC-211ENST00000546304 SLC13A1Q9BZW2 595 aa6.23□□□□□ -1.41
PRKDC-211ENST00000546304 TSPYL1Q9H0U9 437 aa6.23□□□□□ -1.41
PRKDC-211ENST00000546304 TCEAL2Q9H3H9 227 aaPredicted RBP6.23□□□□□ -1.41
PRKDC-211ENST00000546304 CDC42EP4Q9H3Q1 356 aaKnown RBP6.23□□□□□ -1.41
PRKDC-211ENST00000546304 FAM96AQ9H5X1 160 aa6.23□□□□□ -1.41
PRKDC-211ENST00000546304 GAREM1Q9H706 876 aa6.23□□□□□ -1.41
PRKDC-211ENST00000546304 CAAP1Q9H8G2 361 aa6.23□□□□□ -1.41
PRKDC-211ENST00000546304 RMI1Q9H9A7 625 aa6.23□□□□□ -1.41
PRKDC-211ENST00000546304 IL21RQ9HBE5 538 aa6.23□□□□□ -1.41
PRKDC-211ENST00000546304 TRIM39Q9HCM9 518 aa6.23□□□□□ -1.41
PRKDC-211ENST00000546304 TMEM9BQ9NQ34 198 aa6.23□□□□□ -1.41
PRKDC-211ENST00000546304 MRPL40Q9NQ50 206 aaKnown RBP6.23□□□□□ -1.41
PRKDC-211ENST00000546304 PPANQ9NQ55 473 aaKnown RBP6.23□□□□□ -1.41
PRKDC-211ENST00000546304 RXFP3Q9NSD7 469 aa6.23□□□□□ -1.41
PRKDC-211ENST00000546304 C20orf96Q9NUD7 363 aaPredicted RBP6.23□□□□□ -1.41
PRKDC-211ENST00000546304 SLC17A6Q9P2U8 582 aa6.23□□□□□ -1.41
PRKDC-211ENST00000546304 ATXN10Q9UBB4 475 aa6.23□□□□□ -1.41
PRKDC-211ENST00000546304 MOSPD1Q9UJG1 213 aa6.23□□□□□ -1.41
PRKDC-211ENST00000546304 POLR3KQ9Y2Y1 108 aaPredicted RBP6.23□□□□□ -1.41
PRKDC-211ENST00000546304 TMEM98Q9Y2Y6 226 aa6.23□□□□□ -1.41
PRKDC-211ENST00000546304 PCYT1BQ9Y5K3 369 aaPredicted RBP6.23□□□□□ -1.41
PRKDC-211ENST00000546304 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.23□□□□□ -1.41
PRKDC-211ENST00000546304 FAM169AQ9Y6X4 670 aa6.23□□□□□ -1.41
PRKDC-211ENST00000546304 PCNX2A6NKB5 2137 aa6.23□□□□□ -1.41
PRKDC-211ENST00000546304 ANKRD12Q6UB98 2062 aa6.22□□□□□ -1.41
PRKDC-211ENST00000546304 TCRBV9S1A1TA0A576 114 aa6.22□□□□□ -1.41
PRKDC-211ENST00000546304 UBA6A0AVT1 1052 aaPredicted RBP6.22□□□□□ -1.41
PRKDC-211ENST00000546304 OR2AG2A6NM03 316 aa6.22□□□□□ -1.41
PRKDC-211ENST00000546304 QSOX1O00391 747 aa6.22□□□□□ -1.41
PRKDC-211ENST00000546304 PRMT5O14744 637 aaPredicted RBP6.22□□□□□ -1.41
PRKDC-211ENST00000546304 CHUKO15111 745 aa6.22□□□□□ -1.41
PRKDC-211ENST00000546304 PFDN6O15212 129 aa6.22□□□□□ -1.41
PRKDC-211ENST00000546304 GRID2O43424 1007 aa6.22□□□□□ -1.41
PRKDC-211ENST00000546304 OR1I1O60431 355 aa6.22□□□□□ -1.41
PRKDC-211ENST00000546304 CDK14O94921 469 aa6.22□□□□□ -1.41
PRKDC-211ENST00000546304 HTR3BO95264 441 aa6.22□□□□□ -1.41
PRKDC-211ENST00000546304 ACSL3O95573 720 aa6.22□□□□□ -1.41
PRKDC-211ENST00000546304 CBX7O95931 251 aa6.22□□□□□ -1.41
PRKDC-211ENST00000546304 F7P08709 466 aaPredicted RBP6.22□□□□□ -1.41
PRKDC-211ENST00000546304 GSTA2P09210 222 aa6.22□□□□□ -1.41
PRKDC-211ENST00000546304 ERVK-10P10266 1014 aa6.22□□□□□ -1.41
PRKDC-211ENST00000546304 ACP5P13686 325 aa6.22□□□□□ -1.41
PRKDC-211ENST00000546304 ZNF7P17097 686 aaPredicted RBP6.22□□□□□ -1.41
PRKDC-211ENST00000546304 PBLDP30039 288 aaPredicted RBP6.22□□□□□ -1.41
PRKDC-211ENST00000546304 SSTR1P30872 391 aa6.22□□□□□ -1.41
PRKDC-211ENST00000546304 STX2P32856 288 aa6.22□□□□□ -1.41
PRKDC-211ENST00000546304 PPARGP37231 505 aaPredicted RBP6.22□□□□□ -1.41
PRKDC-211ENST00000546304 PLA2G5P39877 138 aa6.22□□□□□ -1.41
PRKDC-211ENST00000546304 NSG1P42857 185 aa6.22□□□□□ -1.41
PRKDC-211ENST00000546304 RXRGP48443 463 aa6.22□□□□□ -1.41
PRKDC-211ENST00000546304 VSNL1P62760 191 aa6.22□□□□□ -1.41
PRKDC-211ENST00000546304 MPP1Q00013 466 aa6.22□□□□□ -1.41
PRKDC-211ENST00000546304 MGAT5Q09328 741 aa6.22□□□□□ -1.41
PRKDC-211ENST00000546304 TMEM115Q12893 351 aaPredicted RBP6.22□□□□□ -1.41
PRKDC-211ENST00000546304 ILF3Q12906 894 aaKnown RBP eCLIP6.22□□□□□ -1.41
PRKDC-211ENST00000546304 ELOCQ15369 112 aa6.22□□□□□ -1.41
PRKDC-211ENST00000546304 SHBQ15464 509 aa6.22□□□□□ -1.41
PRKDC-211ENST00000546304 INSCQ1MX18 579 aa6.22□□□□□ -1.41
PRKDC-211ENST00000546304 ERCC6LQ2NKX8 1250 aa6.22□□□□□ -1.41
PRKDC-211ENST00000546304 INAVAQ3KP66 663 aa6.22□□□□□ -1.41
PRKDC-211ENST00000546304 BCL7AQ4VC05 210 aa6.22□□□□□ -1.41
PRKDC-211ENST00000546304 PYCR3Q53H96 274 aa6.22□□□□□ -1.41
PRKDC-211ENST00000546304 HSP90AA5PQ58FG0 334 aa6.22□□□□□ -1.41
PRKDC-211ENST00000546304 PRAMEF14Q5SWL7 426 aa6.22□□□□□ -1.41
PRKDC-211ENST00000546304 ZNF449Q6P9G9 518 aa6.22□□□□□ -1.41
PRKDC-211ENST00000546304 KIAA0408Q6ZU52 694 aa6.22□□□□□ -1.41
PRKDC-211ENST00000546304 DET1Q7L5Y6 550 aa6.22□□□□□ -1.41
PRKDC-211ENST00000546304 RD3Q7Z3Z2 195 aa6.22□□□□□ -1.41
PRKDC-211ENST00000546304 LDB1Q86U70 411 aaPredicted RBP6.22□□□□□ -1.41
PRKDC-211ENST00000546304 LRRTM4Q86VH4 590 aa6.22□□□□□ -1.41
PRKDC-211ENST00000546304 ZNF547Q8IVP9 402 aa6.22□□□□□ -1.41
PRKDC-211ENST00000546304 DENND6AQ8IWF6 608 aa6.22□□□□□ -1.41
PRKDC-211ENST00000546304 LMNTD2Q8IXW0 634 aa6.22□□□□□ -1.41
PRKDC-211ENST00000546304 FSTL5Q8N475 847 aaPredicted RBP6.22□□□□□ -1.41
PRKDC-211ENST00000546304 CLDN19Q8N6F1 224 aa6.22□□□□□ -1.41
PRKDC-211ENST00000546304 PNPLA1Q8N8W4 532 aa6.22□□□□□ -1.41
PRKDC-211ENST00000546304 RASGEF1AQ8N9B8 481 aa6.22□□□□□ -1.41
PRKDC-211ENST00000546304 FAM13CQ8NE31 585 aa6.22□□□□□ -1.41
PRKDC-211ENST00000546304 GPR150Q8NGU9 434 aa6.22□□□□□ -1.41
PRKDC-211ENST00000546304 GABPB2Q8TAK5 448 aaPredicted RBP6.22□□□□□ -1.41
PRKDC-211ENST00000546304 LMX1AQ8TE12 382 aa6.22□□□□□ -1.41
PRKDC-211ENST00000546304 NAT14Q8WUY8 206 aa6.22□□□□□ -1.41
PRKDC-211ENST00000546304 HEXDCQ8WVB3 486 aa6.22□□□□□ -1.41
PRKDC-211ENST00000546304 LPGAT1Q92604 370 aa6.22□□□□□ -1.41
PRKDC-211ENST00000546304 ZNF514Q96K75 400 aaPredicted RBP6.22□□□□□ -1.41
PRKDC-211ENST00000546304 TIMM29Q9BSF4 260 aa6.22□□□□□ -1.41
PRKDC-211ENST00000546304 GSDMCQ9BYG8 508 aa6.22□□□□□ -1.41
PRKDC-211ENST00000546304 CLPBQ9H078 707 aa6.22□□□□□ -1.41
PRKDC-211ENST00000546304 TMEM168Q9H0V1 697 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms