RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 CLK3P49761 638 aaKnown RBP13.94□□□□□ -0.18
SRP54-202ENST00000546080 RPL38P63173 70 aaKnown RBP13.94□□□□□ -0.18
SRP54-202ENST00000546080 PTPRNQ16849 979 aa13.94□□□□□ -0.18
SRP54-202ENST00000546080 FAM174BQ3ZCQ3 159 aa13.94□□□□□ -0.18
SRP54-202ENST00000546080 GCNT7Q6ZNI0 430 aa13.94□□□□□ -0.18
SRP54-202ENST00000546080 SIDT2Q8NBJ9 832 aaKnown RBP13.94□□□□□ -0.18
SRP54-202ENST00000546080 SLC16A10Q8TF71 515 aa13.94□□□□□ -0.18
SRP54-202ENST00000546080 CCDC97Q96F63 343 aaPredicted RBP13.94□□□□□ -0.18
SRP54-202ENST00000546080 LINGO1Q96FE5 620 aa13.94□□□□□ -0.18
SRP54-202ENST00000546080 SERPINB11Q96P15 392 aa13.94□□□□□ -0.18
SRP54-202ENST00000546080 APOL4Q9BPW4 351 aa13.94□□□□□ -0.18
SRP54-202ENST00000546080 RHNO1Q9BSD3 238 aa13.94□□□□□ -0.18
SRP54-202ENST00000546080 POLR1EQ9GZS1 481 aaKnown RBP13.94□□□□□ -0.18
SRP54-202ENST00000546080 MMP27Q9H306 513 aa13.94□□□□□ -0.18
SRP54-202ENST00000546080 OPTCQ9UBM4 332 aa13.94□□□□□ -0.18
SRP54-202ENST00000546080 PLXNB2O15031 1838 aa13.94□□□□□ -0.18
SRP54-202ENST00000546080 MBLAC1A4D2B0 266 aaPredicted RBP13.93□□□□□ -0.18
SRP54-202ENST00000546080 AGAP5A6NIR3 686 aa13.93□□□□□ -0.18
SRP54-202ENST00000546080 RAD51BO15315 384 aa13.93□□□□□ -0.18
SRP54-202ENST00000546080 KRT75O95678 551 aa13.93□□□□□ -0.18
SRP54-202ENST00000546080 PTTG1O95997 202 aa13.93□□□□□ -0.18
SRP54-202ENST00000546080 CNPP09543 421 aaKnown RBP13.93□□□□□ -0.18
SRP54-202ENST00000546080 ODC1P11926 461 aa13.93□□□□□ -0.18
SRP54-202ENST00000546080 SLC2A4P14672 509 aa13.93□□□□□ -0.18
SRP54-202ENST00000546080 BMPR1AP36894 532 aa13.93□□□□□ -0.18
SRP54-202ENST00000546080 TGFBR2P37173 567 aa13.93□□□□□ -0.18
SRP54-202ENST00000546080 SCNN1GP51170 649 aa13.93□□□□□ -0.18
SRP54-202ENST00000546080 CLPPQ16740 277 aaPredicted RBP13.93□□□□□ -0.18
SRP54-202ENST00000546080 DUSP28Q4G0W2 176 aa13.93□□□□□ -0.18
SRP54-202ENST00000546080 ALFQ53S48 1182 aa13.93□□□□□ -0.18
SRP54-202ENST00000546080 FAM171BQ6P995 826 aa13.93□□□□□ -0.18
SRP54-202ENST00000546080 AFTPHQ6ULP2 937 aa13.93□□□□□ -0.18
SRP54-202ENST00000546080 PHACTR4Q8IZ21 702 aa13.93□□□□□ -0.18
SRP54-202ENST00000546080 PROX1Q92786 737 aa13.93□□□□□ -0.18
SRP54-202ENST00000546080 PYURFQ96I23 114 aa13.93□□□□□ -0.18
SRP54-202ENST00000546080 C1orf74Q96LT6 269 aa13.93□□□□□ -0.18
SRP54-202ENST00000546080 GAD1Q99259 594 aa13.93□□□□□ -0.18
SRP54-202ENST00000546080 C6orf62Q9GZU0 229 aaPredicted RBP13.93□□□□□ -0.18
SRP54-202ENST00000546080 TP63Q9H3D4 680 aaPredicted RBP13.93□□□□□ -0.18
SRP54-202ENST00000546080 ZBTB20Q9HC78 741 aaPredicted RBP13.93□□□□□ -0.18
SRP54-202ENST00000546080 NEK6Q9HC98 313 aa13.93□□□□□ -0.18
SRP54-202ENST00000546080 TMEM248Q9NWD8 314 aa13.93□□□□□ -0.18
SRP54-202ENST00000546080 VNN3Q9NY84 501 aa13.93□□□□□ -0.18
SRP54-202ENST00000546080 SLC25A37Q9NYZ2 338 aa13.93□□□□□ -0.18
SRP54-202ENST00000546080 RIMKLBQ9ULI2 386 aa13.93□□□□□ -0.18
SRP54-202ENST00000546080 ERVW-1Q9UQF0 538 aa13.93□□□□□ -0.18
SRP54-202ENST00000546080 EIF3LQ9Y262 564 aaKnown RBP13.93□□□□□ -0.18
SRP54-202ENST00000546080 AP3M1Q9Y2T2 418 aa13.93□□□□□ -0.18
SRP54-202ENST00000546080 CASTOR2A6NHX0 329 aa13.93□□□□□ -0.18
SRP54-202ENST00000546080 FAM220BPB1ANY3 271 aa13.93□□□□□ -0.18
SRP54-202ENST00000546080 ADM5C9JUS6 153 aa13.93□□□□□ -0.18
SRP54-202ENST00000546080 RGS13O14921 159 aa13.93□□□□□ -0.18
SRP54-202ENST00000546080 MRPS14O60783 128 aaKnown RBP13.93□□□□□ -0.18
SRP54-202ENST00000546080 SNAI1O95863 264 aaPredicted RBP13.93□□□□□ -0.18
SRP54-202ENST00000546080 S100BP04271 92 aaPredicted RBP13.93□□□□□ -0.18
SRP54-202ENST00000546080 SPNP16150 400 aa13.93□□□□□ -0.18
SRP54-202ENST00000546080 HOXB6P17509 224 aaKnown RBP13.93□□□□□ -0.18
SRP54-202ENST00000546080 IL2P60568 153 aa13.93□□□□□ -0.18
SRP54-202ENST00000546080 TUBA1BP68363 451 aa13.93□□□□□ -0.18
SRP54-202ENST00000546080 PTGR1Q14914 329 aa13.93□□□□□ -0.18
SRP54-202ENST00000546080 ABRAXAS2Q15018 415 aa13.93□□□□□ -0.18
SRP54-202ENST00000546080 TIGD5Q53EQ6 642 aa13.93□□□□□ -0.18
SRP54-202ENST00000546080 RUNDC3AQ59EK9 446 aa13.93□□□□□ -0.18
SRP54-202ENST00000546080 CPZQ66K79 652 aa13.93□□□□□ -0.18
SRP54-202ENST00000546080 DESI1Q6ICB0 168 aa13.93□□□□□ -0.18
SRP54-202ENST00000546080 CES5AQ6NT32 575 aa13.93□□□□□ -0.18
SRP54-202ENST00000546080 TUBA1AQ71U36 451 aa13.93□□□□□ -0.18
SRP54-202ENST00000546080 CYP4Z1Q86W10 505 aa13.93□□□□□ -0.18
SRP54-202ENST00000546080 METTL23Q86XA0 190 aa13.93□□□□□ -0.18
SRP54-202ENST00000546080 MSRB3Q8IXL7 192 aa13.93□□□□□ -0.18
SRP54-202ENST00000546080 KIAA1958Q8N8K9 716 aa13.93□□□□□ -0.18
SRP54-202ENST00000546080 FAM83FQ8NEG4 500 aaPredicted RBP13.93□□□□□ -0.18
SRP54-202ENST00000546080 OR4F6Q8NGB9 312 aa13.93□□□□□ -0.18
SRP54-202ENST00000546080 NETO1Q8TDF5 533 aa13.93□□□□□ -0.18
SRP54-202ENST00000546080 EEF1AKMT1Q8WVE0 214 aa13.93□□□□□ -0.18
SRP54-202ENST00000546080 PPP3R2Q96LZ3 170 aa13.93□□□□□ -0.18
SRP54-202ENST00000546080 ACBD6Q9BR61 282 aa13.93□□□□□ -0.18
SRP54-202ENST00000546080 DPY30Q9C005 99 aa13.93□□□□□ -0.18
SRP54-202ENST00000546080 PRDM5Q9NQX1 630 aaPredicted RBP13.93□□□□□ -0.18
SRP54-202ENST00000546080 NLE1Q9NVX2 485 aaPredicted RBP13.93□□□□□ -0.18
SRP54-202ENST00000546080 OR2A25A4D2G3 310 aa13.92□□□□□ -0.18
SRP54-202ENST00000546080 METTL15A6NJ78 407 aa13.92□□□□□ -0.18
SRP54-202ENST00000546080 NIPSNAP2O75323 286 aa13.92□□□□□ -0.18
SRP54-202ENST00000546080 TSPAN12O95859 305 aa13.92□□□□□ -0.18
SRP54-202ENST00000546080 LCKP06239 509 aa13.92□□□□□ -0.18
SRP54-202ENST00000546080 AFF1P51825 1210 aaKnown RBP13.92□□□□□ -0.18
SRP54-202ENST00000546080 ARHGDIAP52565 204 aa13.92□□□□□ -0.18
SRP54-202ENST00000546080 COPZ1P61923 177 aa13.92□□□□□ -0.18
SRP54-202ENST00000546080 IL10RBQ08334 325 aa13.92□□□□□ -0.18
SRP54-202ENST00000546080 GTF2H3Q13889 308 aa13.92□□□□□ -0.18
SRP54-202ENST00000546080 ZNF235Q14590 738 aa13.92□□□□□ -0.18
SRP54-202ENST00000546080 LAPTM4AQ15012 233 aa13.92□□□□□ -0.18
SRP54-202ENST00000546080 SMN1Q16637 294 aaKnown RBP13.92□□□□□ -0.18
SRP54-202ENST00000546080 SPANXN4Q5MJ08 99 aa13.92□□□□□ -0.18
SRP54-202ENST00000546080 GOLGA7Q7Z5G4 137 aa13.92□□□□□ -0.18
SRP54-202ENST00000546080 SCD5Q86SK9 330 aa13.92□□□□□ -0.18
SRP54-202ENST00000546080 ZDHHC21Q8IVQ6 265 aa13.92□□□□□ -0.18
SRP54-202ENST00000546080 CCDC103Q8IW40 242 aa13.92□□□□□ -0.18
SRP54-202ENST00000546080 CHPFQ8IZ52 775 aa13.92□□□□□ -0.18
SRP54-202ENST00000546080 FAM120BQ96EK7 910 aaKnown RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms