RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 QSOX1O00391 747 aa20.48■□□□□ 0.87
SCARB1-210ENST00000545493 ARHGAP6O43182 974 aa20.48■□□□□ 0.87
SCARB1-210ENST00000545493 FTH1P02794 183 aa20.48■□□□□ 0.87
SCARB1-210ENST00000545493 ZSCAN5DPP0CG00 497 aa20.48■□□□□ 0.87
SCARB1-210ENST00000545493 PVRP15151 417 aa20.48■□□□□ 0.87
SCARB1-210ENST00000545493 ACADLP28330 430 aa20.48■□□□□ 0.87
SCARB1-210ENST00000545493 LMAN1P49257 510 aa20.48■□□□□ 0.87
SCARB1-210ENST00000545493 GSDMDP57764 484 aa20.48■□□□□ 0.87
SCARB1-210ENST00000545493 IL10RAQ13651 578 aa20.48■□□□□ 0.87
SCARB1-210ENST00000545493 SEMA3AQ14563 771 aa20.48■□□□□ 0.87
SCARB1-210ENST00000545493 ZNF517Q6ZMY9 492 aaPredicted RBP20.48■□□□□ 0.87
SCARB1-210ENST00000545493 OR8K5Q8NH50 307 aa20.48■□□□□ 0.87
SCARB1-210ENST00000545493 OR1L3Q8NH93 324 aa20.48■□□□□ 0.87
SCARB1-210ENST00000545493 LKAAEAR1Q8TD35 194 aa20.48■□□□□ 0.87
SCARB1-210ENST00000545493 HDAC10Q969S8 669 aa20.48■□□□□ 0.87
SCARB1-210ENST00000545493 FANCEQ9HB96 536 aa20.48■□□□□ 0.87
SCARB1-210ENST00000545493 ACTR10Q9NZ32 417 aa20.48■□□□□ 0.87
SCARB1-210ENST00000545493 E7EVH7 732 aa20.47■□□□□ 0.87
SCARB1-210ENST00000545493 NR1D1P20393 614 aa20.47■□□□□ 0.87
SCARB1-210ENST00000545493 CSRP3P50461 194 aa20.47■□□□□ 0.87
SCARB1-210ENST00000545493 TLE1Q04724 770 aa20.47■□□□□ 0.87
SCARB1-210ENST00000545493 BRD3Q15059 726 aa20.47■□□□□ 0.87
SCARB1-210ENST00000545493 RPS6KA1Q15418 735 aa20.47■□□□□ 0.87
SCARB1-210ENST00000545493 LACTB2Q53H82 288 aaPredicted RBP20.47■□□□□ 0.87
SCARB1-210ENST00000545493 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.47■□□□□ 0.876e-7■■■■□ 24.2
SCARB1-210ENST00000545493 LRFN5Q96NI6 719 aa20.47■□□□□ 0.87
SCARB1-210ENST00000545493 TRAPPC9Q96Q05 1148 aa20.47■□□□□ 0.87
SCARB1-210ENST00000545493 KLHL25Q9H0H3 589 aa20.47■□□□□ 0.87
SCARB1-210ENST00000545493 PAK5Q9P286 719 aa20.47■□□□□ 0.87
SCARB1-210ENST00000545493 TP53TG5Q9Y2B4 290 aa20.47■□□□□ 0.87
SCARB1-210ENST00000545493 PIPSLA2A3N6 862 aa20.46■□□□□ 0.87
SCARB1-210ENST00000545493 TMEM150CB9EJG8 249 aa20.46■□□□□ 0.87
SCARB1-210ENST00000545493 K7EM74 188 aa20.46■□□□□ 0.87
SCARB1-210ENST00000545493 APRTP07741 180 aa20.46■□□□□ 0.87
SCARB1-210ENST00000545493 OR56A5P0C7T3 313 aa20.46■□□□□ 0.87
SCARB1-210ENST00000545493 MSL3P1P0C860 447 aa20.46■□□□□ 0.87
SCARB1-210ENST00000545493 TPBGLP0DKB5 382 aa20.46■□□□□ 0.87
SCARB1-210ENST00000545493 SPTBP11277 2137 aa20.46■□□□□ 0.87
SCARB1-210ENST00000545493 ADRA1DP25100 572 aa20.46■□□□□ 0.87
SCARB1-210ENST00000545493 RORAP35398 523 aa20.46■□□□□ 0.87
SCARB1-210ENST00000545493 PMS2P54278 862 aa20.46■□□□□ 0.87
SCARB1-210ENST00000545493 KCNC4Q03721 635 aa20.46■□□□□ 0.87
SCARB1-210ENST00000545493 SYTL3Q4VX76 610 aa20.46■□□□□ 0.87
SCARB1-210ENST00000545493 LCN10Q6JVE6 187 aa20.46■□□□□ 0.87
SCARB1-210ENST00000545493 ZNF449Q6P9G9 518 aa20.46■□□□□ 0.87
SCARB1-210ENST00000545493 SPESP1Q6UW49 350 aa20.46■□□□□ 0.87
SCARB1-210ENST00000545493 TRIM73Q86UV7 250 aa20.46■□□□□ 0.87
SCARB1-210ENST00000545493 DSELQ8IZU8 1212 aa20.46■□□□□ 0.87
SCARB1-210ENST00000545493 CCDC89Q8N998 374 aa20.46■□□□□ 0.87
SCARB1-210ENST00000545493 MR1Q95460 341 aa20.46■□□□□ 0.87
SCARB1-210ENST00000545493 CHST8Q9H2A9 424 aa20.46■□□□□ 0.87
SCARB1-210ENST00000545493 ASF1AQ9Y294 204 aa20.46■□□□□ 0.87
SCARB1-210ENST00000545493 MAN2B2Q9Y2E5 1009 aa20.46■□□□□ 0.87
SCARB1-210ENST00000545493 FER1L5A0AVI2 2057 aa20.46■□□□□ 0.87
SCARB1-210ENST00000545493 C2orf74A8MZ97 194 aa20.45■□□□□ 0.86
SCARB1-210ENST00000545493 BHMG1C9JSJ3 638 aaPredicted RBP20.45■□□□□ 0.86
SCARB1-210ENST00000545493 RECKO95980 971 aa20.45■□□□□ 0.86
SCARB1-210ENST00000545493 GAS8O95995 478 aa20.45■□□□□ 0.86
SCARB1-210ENST00000545493 PTPN4P29074 926 aa20.45■□□□□ 0.86
SCARB1-210ENST00000545493 RPL22P35268 128 aaKnown RBP20.45■□□□□ 0.86
SCARB1-210ENST00000545493 UGT8Q16880 541 aa20.45■□□□□ 0.86
SCARB1-210ENST00000545493 PLEKHS1Q5SXH7 462 aa20.45■□□□□ 0.86
SCARB1-210ENST00000545493 FAM198BQ6UWH4 519 aa20.45■□□□□ 0.86
SCARB1-210ENST00000545493 CDHR3Q6ZTQ4 885 aa20.45■□□□□ 0.86
SCARB1-210ENST00000545493 OR4L1Q8NH43 312 aa20.45■□□□□ 0.86
SCARB1-210ENST00000545493 OR5K2Q8NHB8 316 aa20.45■□□□□ 0.86
SCARB1-210ENST00000545493 FLVCR1-AS1Q8TAF5 88 aa20.45■□□□□ 0.86
SCARB1-210ENST00000545493 GPR87Q9BY21 358 aa20.45■□□□□ 0.86
SCARB1-210ENST00000545493 LZTFL1Q9NQ48 299 aa20.45■□□□□ 0.86
SCARB1-210ENST00000545493 PCMTD2Q9NV79 361 aa20.45■□□□□ 0.86
SCARB1-210ENST00000545493 PLAGL1Q9UM63 463 aa20.45■□□□□ 0.86
SCARB1-210ENST00000545493 SNRNP200O75643 2136 aaKnown RBP20.45■□□□□ 0.86
SCARB1-210ENST00000545493 COL12A1Q99715 3063 aa20.45■□□□□ 0.86
SCARB1-210ENST00000545493 PCSK5Q92824 1860 aa20.44■□□□□ 0.86
SCARB1-210ENST00000545493 RFPL1O75677 317 aa20.44■□□□□ 0.86
SCARB1-210ENST00000545493 DNAJB5O75953 348 aa20.44■□□□□ 0.86
SCARB1-210ENST00000545493 UGT2B7P16662 529 aa20.44■□□□□ 0.86
SCARB1-210ENST00000545493 PEBP1P30086 187 aaKnown RBP20.44■□□□□ 0.86
SCARB1-210ENST00000545493 SHMT2P34897 504 aa20.44■□□□□ 0.86
SCARB1-210ENST00000545493 CCNG2Q16589 344 aa20.44■□□□□ 0.86
SCARB1-210ENST00000545493 KCTD19Q17RG1 926 aaPredicted RBP20.44■□□□□ 0.86
SCARB1-210ENST00000545493 LYPLAL1Q5VWZ2 237 aa20.44■□□□□ 0.86
SCARB1-210ENST00000545493 IZUMO3Q5VZ72 239 aa20.44■□□□□ 0.86
SCARB1-210ENST00000545493 CPZQ66K79 652 aa20.44■□□□□ 0.86
SCARB1-210ENST00000545493 DRICH1Q6PGQ1 229 aaPredicted RBP20.44■□□□□ 0.86
SCARB1-210ENST00000545493 UNC5AQ6ZN44 842 aa20.44■□□□□ 0.86
SCARB1-210ENST00000545493 ZNF662Q6ZS27 426 aa20.44■□□□□ 0.86
SCARB1-210ENST00000545493 SYVN1Q86TM6 617 aa20.44■□□□□ 0.86
SCARB1-210ENST00000545493 TBC1D21Q8IYX1 336 aa20.44■□□□□ 0.86
SCARB1-210ENST00000545493 C19orf47Q8N9M1 422 aaKnown RBP20.44■□□□□ 0.86
SCARB1-210ENST00000545493 PPHLN1Q8NEY8 458 aaKnown RBP20.44■□□□□ 0.86
SCARB1-210ENST00000545493 UBE2Q2Q8WVN8 375 aa20.44■□□□□ 0.86
SCARB1-210ENST00000545493 CPT1BQ92523 772 aa20.44■□□□□ 0.86
SCARB1-210ENST00000545493 PEX13Q92968 403 aa20.44■□□□□ 0.86
SCARB1-210ENST00000545493 TRIM55Q9BYV6 548 aa20.44■□□□□ 0.86
SCARB1-210ENST00000545493 SYTL2Q9HCH5 934 aa20.44■□□□□ 0.86
SCARB1-210ENST00000545493 EIF2B3Q9NR50 452 aaKnown RBP20.44■□□□□ 0.86
SCARB1-210ENST00000545493 SPHK1Q9NYA1 384 aa20.44■□□□□ 0.86
SCARB1-210ENST00000545493 MARCH4Q9P2E8 410 aaPredicted RBP20.44■□□□□ 0.86
SCARB1-210ENST00000545493 ANAPC2Q9UJX6 822 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms