RNA–Protein interactions for RNA: ENST00000544639.1

RAP1B-231, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-231	ENST00000544639	CPT2	P23786	658 aa		3.91	□□□□□ -1.78
RAP1B-231	ENST00000544639	SLC9A3	P48764	834 aa		3.91	□□□□□ -1.78
RAP1B-231	ENST00000544639	TPD52	P55327	224 aa	Predicted RBP	3.91	□□□□□ -1.78
RAP1B-231	ENST00000544639	LINC01547	P58512	204 aa	Predicted RBP	3.91	□□□□□ -1.78
RAP1B-231	ENST00000544639	CX3CL1	P78423	397 aa		3.91	□□□□□ -1.78
RAP1B-231	ENST00000544639	KLHL26	Q53HC5	615 aa		3.91	□□□□□ -1.78
RAP1B-231	ENST00000544639	ZNF628	Q5EBL2	1059 aa		3.91	□□□□□ -1.78
RAP1B-231	ENST00000544639	C9orf50	Q5SZB4	431 aa		3.91	□□□□□ -1.78
RAP1B-231	ENST00000544639	C6orf163	Q5TEZ5	329 aa		3.91	□□□□□ -1.78
RAP1B-231	ENST00000544639	FAM198B	Q6UWH4	519 aa		3.91	□□□□□ -1.78
RAP1B-231	ENST00000544639	RBPMS2	Q6ZRY4	209 aa	Known RBP	3.91	□□□□□ -1.78
RAP1B-231	ENST00000544639	FOXP4	Q8IVH2	680 aa	Predicted RBP	3.91	□□□□□ -1.78
RAP1B-231	ENST00000544639	TRIML1	Q8N9V2	468 aa		3.91	□□□□□ -1.78
RAP1B-231	ENST00000544639	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	3.91	□□□□□ -1.78
RAP1B-231	ENST00000544639	XXYLT1	Q8NBI6	393 aa		3.91	□□□□□ -1.78
RAP1B-231	ENST00000544639	FGFBP3	Q8TAT2	258 aa		3.91	□□□□□ -1.78
RAP1B-231	ENST00000544639	LRRC8C	Q8TDW0	803 aa		3.91	□□□□□ -1.78
RAP1B-231	ENST00000544639	SLAMF9	Q96A28	289 aa		3.91	□□□□□ -1.78
RAP1B-231	ENST00000544639	SLC47A1	Q96FL8	570 aa		3.91	□□□□□ -1.78
RAP1B-231	ENST00000544639	HES6	Q96HZ4	224 aa		3.91	□□□□□ -1.78
RAP1B-231	ENST00000544639	LINC00615	Q96LM1	132 aa	Predicted RBP	3.91	□□□□□ -1.78
RAP1B-231	ENST00000544639	PSD2	Q9BQI7	771 aa		3.91	□□□□□ -1.78
RAP1B-231	ENST00000544639	CNOT10	Q9H9A5	744 aa	Known RBP	3.91	□□□□□ -1.78
RAP1B-231	ENST00000544639	DPP3	Q9NY33	737 aa		3.91	□□□□□ -1.78
RAP1B-231	ENST00000544639	C5AR2	Q9P296	337 aa		3.91	□□□□□ -1.78
RAP1B-231	ENST00000544639	WDR35	Q9P2L0	1181 aa		3.91	□□□□□ -1.78
RAP1B-231	ENST00000544639	ZHX1	Q9UKY1	873 aa	Predicted RBP	3.91	□□□□□ -1.78
RAP1B-231	ENST00000544639		A0A087WYN8	130 aa		3.9	□□□□□ -1.79
RAP1B-231	ENST00000544639	EDDM13	A0A1B0GTR0	161 aa		3.9	□□□□□ -1.79
RAP1B-231	ENST00000544639	OR6C76	A6NM76	312 aa		3.9	□□□□□ -1.79
RAP1B-231	ENST00000544639	TADA2A	O75478	443 aa		3.9	□□□□□ -1.79
RAP1B-231	ENST00000544639	IGHV4-38-2	P0DP08	117 aa		3.9	□□□□□ -1.79
RAP1B-231	ENST00000544639	ANOS1	P23352	680 aa		3.9	□□□□□ -1.79
RAP1B-231	ENST00000544639	EPHA2	P29317	976 aa		3.9	□□□□□ -1.79
RAP1B-231	ENST00000544639	SLC6A6	P31641	620 aa		3.9	□□□□□ -1.79
RAP1B-231	ENST00000544639	MC5R	P33032	325 aa		3.9	□□□□□ -1.79
RAP1B-231	ENST00000544639	MTHFR	P42898	656 aa		3.9	□□□□□ -1.79
RAP1B-231	ENST00000544639	ZNF75D	P51815	510 aa		3.9	□□□□□ -1.79
RAP1B-231	ENST00000544639	CSE1L	P55060	971 aa	Known RBP	3.9	□□□□□ -1.79
RAP1B-231	ENST00000544639	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	3.9	□□□□□ -1.79
RAP1B-231	ENST00000544639	KRT80	Q6KB66	452 aa		3.9	□□□□□ -1.79
RAP1B-231	ENST00000544639	SLC27A1	Q6PCB7	646 aa		3.9	□□□□□ -1.79
RAP1B-231	ENST00000544639	CORO6	Q6QEF8	472 aa		3.9	□□□□□ -1.79
RAP1B-231	ENST00000544639	CENPV	Q7Z7K6	275 aa	Predicted RBP	3.9	□□□□□ -1.79
RAP1B-231	ENST00000544639	IQCH	Q86VS3	1027 aa		3.9	□□□□□ -1.79
RAP1B-231	ENST00000544639	COMMD2	Q86X83	199 aa		3.9	□□□□□ -1.79
RAP1B-231	ENST00000544639	OR13J1	Q8NGT2	312 aa		3.9	□□□□□ -1.79
RAP1B-231	ENST00000544639	FCAMR	Q8WWV6	532 aa		3.9	□□□□□ -1.79
RAP1B-231	ENST00000544639	ATL1	Q8WXF7	558 aa		3.9	□□□□□ -1.79
RAP1B-231	ENST00000544639	DNASE2B	Q8WZ79	361 aa		3.9	□□□□□ -1.79
RAP1B-231	ENST00000544639	TM9SF4	Q92544	642 aa		3.9	□□□□□ -1.79
RAP1B-231	ENST00000544639	MYADM	Q96S97	322 aa		3.9	□□□□□ -1.79
RAP1B-231	ENST00000544639	SEPHS2	Q99611	448 aa		3.9	□□□□□ -1.79
RAP1B-231	ENST00000544639	RABEP2	Q9H5N1	569 aa		3.9	□□□□□ -1.79
RAP1B-231	ENST00000544639	PIH1D3	Q9NQM4	214 aa	Known RBP	3.9	□□□□□ -1.79
RAP1B-231	ENST00000544639	ZNF701	Q9NV72	531 aa	Predicted RBP	3.9	□□□□□ -1.79
RAP1B-231	ENST00000544639	COQ3	Q9NZJ6	369 aa		3.9	□□□□□ -1.79
RAP1B-231	ENST00000544639	BCCIP	Q9P287	314 aa	Known RBP eCLIP	3.9	□□□□□ -1.79
RAP1B-231	ENST00000544639	SLC24A2	Q9UI40	661 aa		3.9	□□□□□ -1.79
RAP1B-231	ENST00000544639	MTUS1	Q9ULD2	1270 aa		3.9	□□□□□ -1.79
RAP1B-231	ENST00000544639	SLC7A7	Q9UM01	511 aa		3.9	□□□□□ -1.79
RAP1B-231	ENST00000544639	FLT1	P17948	1338 aa		3.9	□□□□□ -1.79
RAP1B-231	ENST00000544639		A0A1W2PPQ1	181 aa		3.89	□□□□□ -1.79
RAP1B-231	ENST00000544639		A8MXE2	369 aa		3.89	□□□□□ -1.79
RAP1B-231	ENST00000544639	FAM72C	H0Y354	149 aa		3.89	□□□□□ -1.79
RAP1B-231	ENST00000544639	TRIM77	I1YAP6	450 aa		3.89	□□□□□ -1.79
RAP1B-231	ENST00000544639	MEIS2	O14770	477 aa		3.89	□□□□□ -1.79
RAP1B-231	ENST00000544639	SLC22A2	O15244	555 aa		3.89	□□□□□ -1.79
RAP1B-231	ENST00000544639	RNASEH1	O60930	286 aa	Known RBP	3.89	□□□□□ -1.79
RAP1B-231	ENST00000544639	TBX10	O75333	385 aa		3.89	□□□□□ -1.79
RAP1B-231	ENST00000544639	SLCO2B1	O94956	709 aa		3.89	□□□□□ -1.79
RAP1B-231	ENST00000544639	GGPS1	O95749	300 aa		3.89	□□□□□ -1.79
RAP1B-231	ENST00000544639	PRSS1	P07477	247 aa		3.89	□□□□□ -1.79
RAP1B-231	ENST00000544639	LIF	P15018	202 aa		3.89	□□□□□ -1.79
RAP1B-231	ENST00000544639	DMPK	Q09013	629 aa		3.89	□□□□□ -1.79
RAP1B-231	ENST00000544639	RALGDS	Q12967	914 aa		3.89	□□□□□ -1.79
RAP1B-231	ENST00000544639	VWC2	Q2TAL6	325 aa		3.89	□□□□□ -1.79
RAP1B-231	ENST00000544639	KRTAP24-1	Q3LI83	254 aa		3.89	□□□□□ -1.79
RAP1B-231	ENST00000544639	TCP11X2	Q5H9J9	407 aa		3.89	□□□□□ -1.79
RAP1B-231	ENST00000544639	FAM72A	Q5TYM5	149 aa		3.89	□□□□□ -1.79
RAP1B-231	ENST00000544639	SLC35E4	Q6ICL7	350 aa		3.89	□□□□□ -1.79
RAP1B-231	ENST00000544639	FAM72D	Q6L9T8	149 aa		3.89	□□□□□ -1.79
RAP1B-231	ENST00000544639	USP43	Q70EL4	1123 aa		3.89	□□□□□ -1.79
RAP1B-231	ENST00000544639	ZNF554	Q86TJ5	538 aa		3.89	□□□□□ -1.79
RAP1B-231	ENST00000544639	TRPT1	Q86TN4	253 aa	Known RBP	3.89	□□□□□ -1.79
RAP1B-231	ENST00000544639	FAM72B	Q86X60	149 aa		3.89	□□□□□ -1.79
RAP1B-231	ENST00000544639	MAML2	Q8IZL2	1156 aa	Predicted RBP	3.89	□□□□□ -1.79
RAP1B-231	ENST00000544639	ARHGAP24	Q8N264	748 aa		3.89	□□□□□ -1.79
RAP1B-231	ENST00000544639	STPG4	Q8N801	248 aa		3.89	□□□□□ -1.79
RAP1B-231	ENST00000544639	OR1J1	Q8NGS3	322 aa		3.89	□□□□□ -1.79
RAP1B-231	ENST00000544639	OLIG1	Q8TAK6	271 aa		3.89	□□□□□ -1.79
RAP1B-231	ENST00000544639	GRHL3	Q8TE85	626 aa		3.89	□□□□□ -1.79
RAP1B-231	ENST00000544639	HSD17B8	Q92506	261 aa		3.89	□□□□□ -1.79
RAP1B-231	ENST00000544639	ZNF524	Q96C55	264 aa		3.89	□□□□□ -1.79
RAP1B-231	ENST00000544639	CFAP57	Q96MR6	1250 aa		3.89	□□□□□ -1.79
RAP1B-231	ENST00000544639	SFXN2	Q96NB2	322 aa		3.89	□□□□□ -1.79
RAP1B-231	ENST00000544639	PGLYRP2	Q96PD5	576 aa		3.89	□□□□□ -1.79
RAP1B-231	ENST00000544639	RTP3	Q9BQQ7	232 aa		3.89	□□□□□ -1.79
RAP1B-231	ENST00000544639	TRAF4	Q9BUZ4	470 aa	Predicted RBP	3.89	□□□□□ -1.79
RAP1B-231	ENST00000544639	BICC1	Q9H694	974 aa	Known RBP	3.89	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms