RNA–Protein interactions for RNA: ENST00000544552.5

PAAF1-214, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-214ENST00000544552 PNCKQ6P2M8 343 aa12.46□□□□□ -0.41
PAAF1-214ENST00000544552 Q6ZSR9 355 aa12.46□□□□□ -0.41
PAAF1-214ENST00000544552 DSELQ8IZU8 1212 aa12.46□□□□□ -0.41
PAAF1-214ENST00000544552 PGAM4Q8N0Y7 254 aa12.46□□□□□ -0.41
PAAF1-214ENST00000544552 ENDOVQ8N8Q3 282 aaKnown RBP12.46□□□□□ -0.41
PAAF1-214ENST00000544552 SKA2Q8WVK7 121 aaPredicted RBP12.46□□□□□ -0.41
PAAF1-214ENST00000544552 COX14Q96I36 57 aa12.46□□□□□ -0.41
PAAF1-214ENST00000544552 HIC2Q96JB3 615 aa12.46□□□□□ -0.41
PAAF1-214ENST00000544552 MRPL1Q9BYD6 325 aaKnown RBP12.46□□□□□ -0.41
PAAF1-214ENST00000544552 SLC29A3Q9BZD2 475 aa12.46□□□□□ -0.41
PAAF1-214ENST00000544552 DCLRE1BQ9H816 532 aa12.46□□□□□ -0.41
PAAF1-214ENST00000544552 RNPEPL1Q9HAU8 725 aa12.46□□□□□ -0.41
PAAF1-214ENST00000544552 ZDHHC4Q9NPG8 344 aa12.46□□□□□ -0.41
PAAF1-214ENST00000544552 TMEM202A6NGA9 273 aa12.45□□□□□ -0.42
PAAF1-214ENST00000544552 CHUKO15111 745 aa12.45□□□□□ -0.42
PAAF1-214ENST00000544552 ENTPD5O75356 428 aa12.45□□□□□ -0.42
PAAF1-214ENST00000544552 CATP04040 527 aaKnown RBP12.45□□□□□ -0.42
PAAF1-214ENST00000544552 HMOX2P30519 316 aa12.45□□□□□ -0.42
PAAF1-214ENST00000544552 TIE1P35590 1138 aa12.45□□□□□ -0.42
PAAF1-214ENST00000544552 WASP42768 502 aa12.45□□□□□ -0.42
PAAF1-214ENST00000544552 NUDT2P50583 147 aa12.45□□□□□ -0.42
PAAF1-214ENST00000544552 ACTR3P61158 418 aa12.45□□□□□ -0.42
PAAF1-214ENST00000544552 RPS14P62263 151 aaKnown RBP12.45□□□□□ -0.42
PAAF1-214ENST00000544552 ERVK-8P63133 956 aa12.45□□□□□ -0.42
PAAF1-214ENST00000544552 TBL3Q12788 808 aaKnown RBP12.45□□□□□ -0.42
PAAF1-214ENST00000544552 ART3Q13508 389 aa12.45□□□□□ -0.42
PAAF1-214ENST00000544552 GTF2H3Q13889 308 aa12.45□□□□□ -0.42
PAAF1-214ENST00000544552 AAK1Q2M2I8 961 aa12.45□□□□□ -0.42
PAAF1-214ENST00000544552 ZXDCQ2QGD7 858 aaPredicted RBP12.45□□□□□ -0.42
PAAF1-214ENST00000544552 LEXMQ3ZCV2 418 aa12.45□□□□□ -0.42
PAAF1-214ENST00000544552 GGTA1PQ4G0N0 100 aa12.45□□□□□ -0.42
PAAF1-214ENST00000544552 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.45□□□□□ -0.42
PAAF1-214ENST00000544552 HACD2Q6Y1H2 254 aa12.45□□□□□ -0.42
PAAF1-214ENST00000544552 KLHDC8AQ8IYD2 350 aa12.45□□□□□ -0.42
PAAF1-214ENST00000544552 MIER2Q8N344 545 aa12.45□□□□□ -0.42
PAAF1-214ENST00000544552 HDDC3Q8N4P3 179 aa12.45□□□□□ -0.42
PAAF1-214ENST00000544552 WDR60Q8WVS4 1066 aa12.45□□□□□ -0.42
PAAF1-214ENST00000544552 ATL1Q8WXF7 558 aa12.45□□□□□ -0.42
PAAF1-214ENST00000544552 RCN3Q96D15 328 aa12.45□□□□□ -0.42
PAAF1-214ENST00000544552 MAGEB10Q96LZ2 347 aaPredicted RBP12.45□□□□□ -0.42
PAAF1-214ENST00000544552 CCDC138Q96M89 665 aa12.45□□□□□ -0.42
PAAF1-214ENST00000544552 CDK15Q96Q40 435 aa12.45□□□□□ -0.42
PAAF1-214ENST00000544552 SERPINI1Q99574 410 aa12.45□□□□□ -0.42
PAAF1-214ENST00000544552 BRINP2Q9C0B6 783 aa12.45□□□□□ -0.42
PAAF1-214ENST00000544552 OR2AG1Q9H205 316 aa12.45□□□□□ -0.42
PAAF1-214ENST00000544552 C8orf33Q9H7E9 229 aaPredicted RBP12.45□□□□□ -0.42
PAAF1-214ENST00000544552 AIG1Q9NVV5 245 aa12.45□□□□□ -0.42
PAAF1-214ENST00000544552 CCDC167Q9P0B6 97 aa12.45□□□□□ -0.42
PAAF1-214ENST00000544552 ATXN10Q9UBB4 475 aa12.45□□□□□ -0.42
PAAF1-214ENST00000544552 GULP1Q9UBP9 304 aa12.45□□□□□ -0.42
PAAF1-214ENST00000544552 GPR45Q9Y5Y3 372 aa12.45□□□□□ -0.42
PAAF1-214ENST00000544552 DNMT3AQ9Y6K1 912 aaPredicted RBP12.45□□□□□ -0.42
PAAF1-214ENST00000544552 TICRRQ7Z2Z1 1910 aa12.45□□□□□ -0.42
PAAF1-214ENST00000544552 TRPM6Q9BX84 2022 aa12.44□□□□□ -0.42
PAAF1-214ENST00000544552 IGLON5A6NGN9 336 aa12.44□□□□□ -0.42
PAAF1-214ENST00000544552 BBIP1A8MTZ0 92 aa12.44□□□□□ -0.42
PAAF1-214ENST00000544552 LOC730098B7Z3J9 87 aa12.44□□□□□ -0.42
PAAF1-214ENST00000544552 MBTPS2O43462 519 aa12.44□□□□□ -0.42
PAAF1-214ENST00000544552 DRD1P21728 446 aa12.44□□□□□ -0.42
PAAF1-214ENST00000544552 MAP4P27816 1152 aaKnown RBP12.44□□□□□ -0.42
PAAF1-214ENST00000544552 MTTPP55157 894 aa12.44□□□□□ -0.42
PAAF1-214ENST00000544552 PCDH1Q08174 1060 aa12.44□□□□□ -0.42
PAAF1-214ENST00000544552 STARD3Q14849 445 aa12.44□□□□□ -0.42
PAAF1-214ENST00000544552 KPNB1Q14974 876 aaKnown RBP12.44□□□□□ -0.42
PAAF1-214ENST00000544552 PTCHD3Q3KNS1 767 aa12.44□□□□□ -0.42
PAAF1-214ENST00000544552 PUS10Q3MIT2 529 aaKnown RBP12.44□□□□□ -0.42
PAAF1-214ENST00000544552 TMEM196Q5HYL7 178 aa12.44□□□□□ -0.42
PAAF1-214ENST00000544552 C6orf136Q5SQH8 315 aa12.44□□□□□ -0.42
PAAF1-214ENST00000544552 FAM219BQ5XKK7 198 aa12.44□□□□□ -0.42
PAAF1-214ENST00000544552 IL27RAQ6UWB1 636 aa12.44□□□□□ -0.42
PAAF1-214ENST00000544552 MBOAT1Q6ZNC8 495 aa12.44□□□□□ -0.42
PAAF1-214ENST00000544552 GK5Q6ZS86 529 aa12.44□□□□□ -0.42
PAAF1-214ENST00000544552 TRMT11Q7Z4G4 463 aaKnown RBP12.44□□□□□ -0.42
PAAF1-214ENST00000544552 TRIM46Q7Z4K8 759 aa12.44□□□□□ -0.42
PAAF1-214ENST00000544552 FUNDC1Q8IVP5 155 aa12.44□□□□□ -0.42
PAAF1-214ENST00000544552 FBXW8Q8N3Y1 598 aa12.44□□□□□ -0.42
PAAF1-214ENST00000544552 OR2T11Q8NH01 316 aa12.44□□□□□ -0.42
PAAF1-214ENST00000544552 CLPTM1LQ96KA5 538 aa12.44□□□□□ -0.42
PAAF1-214ENST00000544552 FOPNLQ96NB1 174 aa12.44□□□□□ -0.42
PAAF1-214ENST00000544552 DPEP2Q9H4A9 486 aa12.44□□□□□ -0.42
PAAF1-214ENST00000544552 SCML1Q9UN30 329 aa12.44□□□□□ -0.42
PAAF1-214ENST00000544552 CCL27Q9Y4X3 112 aa12.44□□□□□ -0.42
PAAF1-214ENST00000544552 CDH23Q9H251 3354 aa12.44□□□□□ -0.42
PAAF1-214ENST00000544552 F5P12259 2224 aa12.44□□□□□ -0.42
PAAF1-214ENST00000544552 KLHL33A6NCF5 533 aa12.44□□□□□ -0.42
PAAF1-214ENST00000544552 GRXCR2A6NFK2 248 aa12.44□□□□□ -0.42
PAAF1-214ENST00000544552 MGAT4DA6NG13 374 aa12.44□□□□□ -0.42
PAAF1-214ENST00000544552 ARHGEF33A8MVX0 844 aa12.44□□□□□ -0.42
PAAF1-214ENST00000544552 GPR89AB7ZAQ6 455 aa12.44□□□□□ -0.42
PAAF1-214ENST00000544552 H3BM21 787 aa12.44□□□□□ -0.42
PAAF1-214ENST00000544552 SLC28A1O00337 649 aa12.44□□□□□ -0.42
PAAF1-214ENST00000544552 NRP2O60462 931 aa12.44□□□□□ -0.42
PAAF1-214ENST00000544552 ULK1O75385 1050 aa12.44□□□□□ -0.42
PAAF1-214ENST00000544552 CLDN9O95484 217 aa12.44□□□□□ -0.42
PAAF1-214ENST00000544552 GPR89BP0CG08 455 aa12.44□□□□□ -0.42
PAAF1-214ENST00000544552 ZNF8P17098 575 aaPredicted RBP12.44□□□□□ -0.42
PAAF1-214ENST00000544552 EPORP19235 508 aa12.44□□□□□ -0.42
PAAF1-214ENST00000544552 TRIM23P36406 574 aa12.44□□□□□ -0.42
PAAF1-214ENST00000544552 ARL1P40616 181 aaPredicted RBP12.44□□□□□ -0.42
PAAF1-214ENST00000544552 MRPS21P82921 87 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms