RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 KRT74Q7RTS7 529 aa12.58□□□□□ -0.4
CHD4-211ENST00000544484 PEBP4Q96S96 227 aa12.58□□□□□ -0.4
CHD4-211ENST00000544484 CLDND1Q9NY35 253 aa12.58□□□□□ -0.4
CHD4-211ENST00000544484 GALPQ9UBC7 116 aa12.58□□□□□ -0.4
CHD4-211ENST00000544484 PRDM4Q9UKN5 801 aa12.58□□□□□ -0.4
CHD4-211ENST00000544484 MYH2Q9UKX2 1941 aa12.58□□□□□ -0.4
CHD4-211ENST00000544484 CCDC182A6NF36 153 aa12.58□□□□□ -0.4
CHD4-211ENST00000544484 TFECO14948 347 aaPredicted RBP12.58□□□□□ -0.4
CHD4-211ENST00000544484 RGS10O43665 173 aa12.58□□□□□ -0.4
CHD4-211ENST00000544484 NOBOXO60393 691 aa12.58□□□□□ -0.4
CHD4-211ENST00000544484 CCL5P13501 91 aa12.58□□□□□ -0.4
CHD4-211ENST00000544484 GPX6P59796 221 aa12.58□□□□□ -0.4
CHD4-211ENST00000544484 SLC13A2Q13183 592 aa12.58□□□□□ -0.4
CHD4-211ENST00000544484 PIK3R6Q5UE93 754 aa12.58□□□□□ -0.4
CHD4-211ENST00000544484 CXorf57Q6NSI4 855 aaKnown RBP12.58□□□□□ -0.4
CHD4-211ENST00000544484 RPS27LQ71UM5 84 aaKnown RBP12.58□□□□□ -0.4
CHD4-211ENST00000544484 ZDHHC21Q8IVQ6 265 aa12.58□□□□□ -0.4
CHD4-211ENST00000544484 CENPNQ96H22 339 aaPredicted RBP12.58□□□□□ -0.4
CHD4-211ENST00000544484 CRTAC1Q9NQ79 661 aa12.58□□□□□ -0.4
CHD4-211ENST00000544484 OXSMQ9NWU1 459 aa12.58□□□□□ -0.4
CHD4-211ENST00000544484 GABRQQ9UN88 632 aa12.58□□□□□ -0.4
CHD4-211ENST00000544484 INSL6Q9Y581 213 aa12.58□□□□□ -0.4
CHD4-211ENST00000544484 SSNA1O43805 119 aa12.58□□□□□ -0.4
CHD4-211ENST00000544484 CHRM5P08912 532 aaPredicted RBP12.58□□□□□ -0.4
CHD4-211ENST00000544484 FOXM1Q08050 763 aa12.58□□□□□ -0.4
CHD4-211ENST00000544484 SLC25A24Q6NUK1 477 aa12.58□□□□□ -0.4
CHD4-211ENST00000544484 ATG14Q6ZNE5 492 aa12.58□□□□□ -0.4
CHD4-211ENST00000544484 PIGWQ7Z7B1 504 aa12.58□□□□□ -0.4
CHD4-211ENST00000544484 ZNF433Q8N7K0 673 aaPredicted RBP12.58□□□□□ -0.4
CHD4-211ENST00000544484 FBXO15Q8NCQ5 510 aaPredicted RBP12.58□□□□□ -0.4
CHD4-211ENST00000544484 SLC38A4Q969I6 547 aa12.58□□□□□ -0.4
CHD4-211ENST00000544484 MCCC1Q96RQ3 725 aaPredicted RBP12.58□□□□□ -0.4
CHD4-211ENST00000544484 PCYT2Q99447 389 aa12.58□□□□□ -0.4
CHD4-211ENST00000544484 DUSP26Q9BV47 211 aa12.58□□□□□ -0.4
CHD4-211ENST00000544484 MRPS30Q9NP92 439 aaKnown RBP12.58□□□□□ -0.4
CHD4-211ENST00000544484 C11orf16Q9NQ32 467 aa12.58□□□□□ -0.4
CHD4-211ENST00000544484 LMO7Q8WWI1 1683 aa12.58□□□□□ -0.4
CHD4-211ENST00000544484 A8MT66 165 aa12.58□□□□□ -0.4
CHD4-211ENST00000544484 HAS3O00219 553 aa12.58□□□□□ -0.4
CHD4-211ENST00000544484 SCELO95171 688 aa12.58□□□□□ -0.4
CHD4-211ENST00000544484 IMPDH1P20839 514 aa12.58□□□□□ -0.4
CHD4-211ENST00000544484 CPN2P22792 545 aa12.58□□□□□ -0.4
CHD4-211ENST00000544484 SCNN1AP37088 669 aa12.58□□□□□ -0.4
CHD4-211ENST00000544484 TRAP1Q12931 704 aaKnown RBP12.58□□□□□ -0.4
CHD4-211ENST00000544484 RNF19BQ6ZMZ0 732 aa12.58□□□□□ -0.4
CHD4-211ENST00000544484 OR2AP1Q8NGE2 309 aa12.58□□□□□ -0.4
CHD4-211ENST00000544484 C10orf82Q8WW14 230 aa12.58□□□□□ -0.4
CHD4-211ENST00000544484 ARMC5Q96C12 935 aa12.58□□□□□ -0.4
CHD4-211ENST00000544484 ROPN1LQ96C74 230 aa12.58□□□□□ -0.4
CHD4-211ENST00000544484 NARS2Q96I59 477 aaKnown RBP12.58□□□□□ -0.4
CHD4-211ENST00000544484 SMOC2Q9H3U7 446 aa12.58□□□□□ -0.4
CHD4-211ENST00000544484 Q9Y3F1 56 aa12.58□□□□□ -0.4
CHD4-211ENST00000544484 PRDX6P30041 224 aa12.58□□□□□ -0.4
CHD4-211ENST00000544484 MASP1P48740 699 aa12.58□□□□□ -0.4
CHD4-211ENST00000544484 STXBP1P61764 594 aaKnown RBP12.58□□□□□ -0.4
CHD4-211ENST00000544484 PRR5P85299 388 aa12.58□□□□□ -0.4
CHD4-211ENST00000544484 AMZ1Q400G9 498 aa12.58□□□□□ -0.4
CHD4-211ENST00000544484 SMARCD3Q6STE5 483 aa12.58□□□□□ -0.4
CHD4-211ENST00000544484 JAZF1Q86VZ6 243 aa12.58□□□□□ -0.4
CHD4-211ENST00000544484 OR52B2Q96RD2 323 aa12.58□□□□□ -0.4
CHD4-211ENST00000544484 YIPF4Q9BSR8 244 aa12.58□□□□□ -0.4
CHD4-211ENST00000544484 NUSAP1Q9BXS6 441 aaKnown RBP12.58□□□□□ -0.4
CHD4-211ENST00000544484 GALNT8Q9NY28 637 aa12.58□□□□□ -0.4
CHD4-211ENST00000544484 SIRPGQ9P1W8 387 aa12.58□□□□□ -0.4
CHD4-211ENST00000544484 PPM1HQ9ULR3 514 aa12.58□□□□□ -0.4
CHD4-211ENST00000544484 SCML2Q9UQR0 700 aa12.58□□□□□ -0.4
CHD4-211ENST00000544484 CDC7O00311 574 aa12.57□□□□□ -0.4
CHD4-211ENST00000544484 GNB5O14775 395 aa12.57□□□□□ -0.4
CHD4-211ENST00000544484 GPIP06744 558 aa12.57□□□□□ -0.4
CHD4-211ENST00000544484 MS4A13Q5J8X5 152 aa12.57□□□□□ -0.4
CHD4-211ENST00000544484 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.57□□□□□ -0.47e-7■■■■■ 46.1
CHD4-211ENST00000544484 PEG10Q86TG7 708 aaKnown RBP12.57□□□□□ -0.4
CHD4-211ENST00000544484 NSMCE3Q96MG7 304 aa12.57□□□□□ -0.4
CHD4-211ENST00000544484 GMLQ99445 158 aa12.57□□□□□ -0.4
CHD4-211ENST00000544484 WDR26Q9H7D7 661 aa12.57□□□□□ -0.4
CHD4-211ENST00000544484 ZDHHC3Q9NYG2 299 aa12.57□□□□□ -0.4
CHD4-211ENST00000544484 PCDH7O60245 1069 aa12.57□□□□□ -0.4
CHD4-211ENST00000544484 SLBPQ14493 270 aaKnown RBP eCLIP12.57□□□□□ -0.4
CHD4-211ENST00000544484 OAFQ86UD1 273 aa12.57□□□□□ -0.4
CHD4-211ENST00000544484 ZNF599Q96NL3 588 aa12.57□□□□□ -0.4
CHD4-211ENST00000544484 CHID1Q9BWS9 393 aa12.57□□□□□ -0.4
CHD4-211ENST00000544484 PLGRKTQ9HBL7 147 aa12.57□□□□□ -0.4
CHD4-211ENST00000544484 ADAP2Q9NPF8 381 aa12.57□□□□□ -0.4
CHD4-211ENST00000544484 KCPQ6ZWJ8 1503 aa12.57□□□□□ -0.4
CHD4-211ENST00000544484 PHLPP1O60346 1717 aa12.57□□□□□ -0.4
CHD4-211ENST00000544484 COL14A1Q05707 1796 aaKnown RBP12.57□□□□□ -0.4
CHD4-211ENST00000544484 A0A1W2PQ45 241 aaPredicted RBP12.57□□□□□ -0.4
CHD4-211ENST00000544484 A0A1W2PQY0 241 aa12.57□□□□□ -0.4
CHD4-211ENST00000544484 ADH5P11766 374 aa12.57□□□□□ -0.4
CHD4-211ENST00000544484 IL12AP29459 219 aa12.57□□□□□ -0.4
CHD4-211ENST00000544484 GDF5P43026 501 aa12.57□□□□□ -0.4
CHD4-211ENST00000544484 LRRC32Q14392 662 aa12.57□□□□□ -0.4
CHD4-211ENST00000544484 PDGFRLQ15198 375 aa12.57□□□□□ -0.4
CHD4-211ENST00000544484 CNKSR3Q6P9H4 555 aa12.57□□□□□ -0.4
CHD4-211ENST00000544484 ZNF572Q7Z3I7 529 aaPredicted RBP12.57□□□□□ -0.4
CHD4-211ENST00000544484 GRASPQ7Z6J2 395 aaPredicted RBP12.57□□□□□ -0.4
CHD4-211ENST00000544484 SLC22A17Q8WUG5 538 aa12.57□□□□□ -0.4
CHD4-211ENST00000544484 CAPSLQ8WWF8 208 aa12.57□□□□□ -0.4
CHD4-211ENST00000544484 TRNT1Q96Q11 434 aaKnown RBP12.57□□□□□ -0.4
CHD4-211ENST00000544484 SLC39A3Q9BRY0 314 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms