RNA–Protein interactions for RNA: ENST00000544474.5

PDZD4-209, Transcript of PDZ domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene PDZD4, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-209ENST00000544474 EPHA2P29317 976 aa12.6□□□□□ -0.39
PDZD4-209ENST00000544474 C21orf33P30042 268 aaPredicted RBP12.6□□□□□ -0.39
PDZD4-209ENST00000544474 CDKN2DP55273 166 aa12.6□□□□□ -0.39
PDZD4-209ENST00000544474 TARDBPQ13148 414 aaKnown RBP eCLIP12.6□□□□□ -0.39
PDZD4-209ENST00000544474 GALNT3Q14435 633 aa12.6□□□□□ -0.39
PDZD4-209ENST00000544474 SKIV2LQ15477 1246 aaKnown RBP12.6□□□□□ -0.39
PDZD4-209ENST00000544474 ESCO2Q56NI9 601 aa12.6□□□□□ -0.39
PDZD4-209ENST00000544474 PCID2Q5JVF3 399 aa12.6□□□□□ -0.39
PDZD4-209ENST00000544474 SDHAF4Q5VUM1 108 aa12.6□□□□□ -0.39
PDZD4-209ENST00000544474 SULT1C3Q6IMI6 304 aa12.6□□□□□ -0.39
PDZD4-209ENST00000544474 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.6□□□□□ -0.39
PDZD4-209ENST00000544474 SLC44A2Q8IWA5 706 aaPredicted RBP12.6□□□□□ -0.39
PDZD4-209ENST00000544474 SCN4BQ8IWT1 228 aa12.6□□□□□ -0.39
PDZD4-209ENST00000544474 FBXO39Q8N4B4 442 aa12.6□□□□□ -0.39
PDZD4-209ENST00000544474 DTWD1Q8N5C7 304 aa12.6□□□□□ -0.39
PDZD4-209ENST00000544474 METTL6Q8TCB7 284 aa12.6□□□□□ -0.39
PDZD4-209ENST00000544474 MMP28Q9H239 520 aa12.6□□□□□ -0.39
PDZD4-209ENST00000544474 ZNF385DQ9H6B1 395 aa12.6□□□□□ -0.39
PDZD4-209ENST00000544474 ACTR8Q9H981 624 aa12.6□□□□□ -0.39
PDZD4-209ENST00000544474 PAK1IP1Q9NWT1 392 aaPredicted RBP12.6□□□□□ -0.39
PDZD4-209ENST00000544474 CD300AQ9UGN4 299 aa12.6□□□□□ -0.39
PDZD4-209ENST00000544474 POLG2Q9UHN1 485 aa12.6□□□□□ -0.39
PDZD4-209ENST00000544474 BTBD3Q9Y2F9 522 aa12.6□□□□□ -0.39
PDZD4-209ENST00000544474 IPPQ9Y573 584 aa12.6□□□□□ -0.39
PDZD4-209ENST00000544474 SLC22A3O75751 556 aa12.6□□□□□ -0.39
PDZD4-209ENST00000544474 B3GALT4O96024 378 aa12.6□□□□□ -0.39
PDZD4-209ENST00000544474 C7P10643 843 aa12.6□□□□□ -0.39
PDZD4-209ENST00000544474 ARSDP51689 593 aa12.6□□□□□ -0.39
PDZD4-209ENST00000544474 HMGCS1Q01581 520 aa12.6□□□□□ -0.39
PDZD4-209ENST00000544474 SNTA1Q13424 505 aa12.6□□□□□ -0.39
PDZD4-209ENST00000544474 PTGR1Q14914 329 aa12.6□□□□□ -0.39
PDZD4-209ENST00000544474 FSCN1Q16658 493 aaKnown RBP12.6□□□□□ -0.39
PDZD4-209ENST00000544474 ZNF484Q5JVG2 852 aa12.6□□□□□ -0.39
PDZD4-209ENST00000544474 LBX2Q6XYB7 198 aa12.6□□□□□ -0.39
PDZD4-209ENST00000544474 CAMKK1Q8N5S9 505 aa12.6□□□□□ -0.39
PDZD4-209ENST00000544474 IL17RDQ8NFM7 739 aa12.6□□□□□ -0.39
PDZD4-209ENST00000544474 CCDC126Q96EE4 140 aa12.6□□□□□ -0.39
PDZD4-209ENST00000544474 C11orf84Q9BUA3 381 aaPredicted RBP12.6□□□□□ -0.39
PDZD4-209ENST00000544474 C1QTNF1Q9BXJ1 281 aa12.6□□□□□ -0.39
PDZD4-209ENST00000544474 FAM124BQ9H5Z6 455 aaPredicted RBP12.6□□□□□ -0.39
PDZD4-209ENST00000544474 SCPEP1Q9HB40 452 aa12.6□□□□□ -0.39
PDZD4-209ENST00000544474 LOC110117498-PIK3R3F6TDL0 507 aa12.6□□□□□ -0.39
PDZD4-209ENST00000544474 BNIP3LO60238 219 aa12.6□□□□□ -0.39
PDZD4-209ENST00000544474 VIPP01282 170 aa12.6□□□□□ -0.39
PDZD4-209ENST00000544474 BEX3Q00994 111 aa12.6□□□□□ -0.39
PDZD4-209ENST00000544474 CLVS2Q5SYC1 327 aa12.6□□□□□ -0.39
PDZD4-209ENST00000544474 RIOX2Q8IUF8 465 aa12.6□□□□□ -0.39
PDZD4-209ENST00000544474 OR13J1Q8NGT2 312 aa12.6□□□□□ -0.39
PDZD4-209ENST00000544474 CHAC2Q8WUX2 184 aa12.6□□□□□ -0.39
PDZD4-209ENST00000544474 BTN2A3PQ96KV6 586 aa12.6□□□□□ -0.39
PDZD4-209ENST00000544474 FAM118AQ9NWS6 357 aa12.6□□□□□ -0.39
PDZD4-209ENST00000544474 PIN4Q9Y237 131 aaKnown RBP12.6□□□□□ -0.39
PDZD4-209ENST00000544474 ARID1BQ8NFD5 2236 aaPredicted RBP12.6□□□□□ -0.39
PDZD4-209ENST00000544474 LOC100130705A0A1B0GUX0 176 aa12.59□□□□□ -0.39
PDZD4-209ENST00000544474 XIRP2A4UGR9 3374 aa12.59□□□□□ -0.39
PDZD4-209ENST00000544474 IQCF5A8MTL0 148 aa12.59□□□□□ -0.39
PDZD4-209ENST00000544474 GPR39O43194 453 aa12.59□□□□□ -0.39
PDZD4-209ENST00000544474 PSMD3O43242 534 aa12.59□□□□□ -0.39
PDZD4-209ENST00000544474 AIREO43918 545 aa12.59□□□□□ -0.39
PDZD4-209ENST00000544474 STAU1O95793 577 aaKnown RBP12.59□□□□□ -0.39
PDZD4-209ENST00000544474 SLC10A3P09131 477 aa12.59□□□□□ -0.39
PDZD4-209ENST00000544474 PFKLP17858 780 aa12.59□□□□□ -0.39
PDZD4-209ENST00000544474 HTR3AP46098 478 aa12.59□□□□□ -0.39
PDZD4-209ENST00000544474 POLR2JP52435 117 aaKnown RBP12.59□□□□□ -0.39
PDZD4-209ENST00000544474 RPL38P63173 70 aaKnown RBP12.59□□□□□ -0.39
PDZD4-209ENST00000544474 CYP4F8P98187 520 aa12.59□□□□□ -0.39
PDZD4-209ENST00000544474 POU4F1Q01851 419 aa12.59□□□□□ -0.39
PDZD4-209ENST00000544474 SMARCB1Q12824 385 aa12.59□□□□□ -0.39
PDZD4-209ENST00000544474 GNA13Q14344 377 aa12.59□□□□□ -0.39
PDZD4-209ENST00000544474 MED22Q15528 200 aa12.59□□□□□ -0.39
PDZD4-209ENST00000544474 TTC23Q5W5X9 447 aa12.59□□□□□ -0.39
PDZD4-209ENST00000544474 WSCD1Q658N2 575 aa12.59□□□□□ -0.39
PDZD4-209ENST00000544474 PHF10Q8WUB8 498 aaKnown RBP12.59□□□□□ -0.39
PDZD4-209ENST00000544474 PTERQ96BW5 349 aa12.59□□□□□ -0.39
PDZD4-209ENST00000544474 BARD1Q99728 777 aaKnown RBP12.59□□□□□ -0.39
PDZD4-209ENST00000544474 EGFL8Q99944 293 aa12.59□□□□□ -0.39
PDZD4-209ENST00000544474 MCMBPQ9BTE3 642 aa12.59□□□□□ -0.39
PDZD4-209ENST00000544474 SPON2Q9BUD6 331 aa12.59□□□□□ -0.39
PDZD4-209ENST00000544474 TAS2R16Q9NYV7 291 aa12.59□□□□□ -0.39
PDZD4-209ENST00000544474 NPAP1Q9NZP6 1156 aa12.59□□□□□ -0.39
PDZD4-209ENST00000544474 OGDHLQ9ULD0 1010 aa12.59□□□□□ -0.39
PDZD4-209ENST00000544474 AAR2Q9Y312 384 aaKnown RBP12.59□□□□□ -0.39
PDZD4-209ENST00000544474 NME7Q9Y5B8 376 aa12.59□□□□□ -0.39
PDZD4-209ENST00000544474 KNL1Q8NG31 2342 aa12.59□□□□□ -0.39
PDZD4-209ENST00000544474 A0A0G2JMP0 313 aa12.59□□□□□ -0.39
PDZD4-209ENST00000544474 A0A0X1KG70 313 aa12.59□□□□□ -0.39
PDZD4-209ENST00000544474 SMLR1H3BR10 107 aa12.59□□□□□ -0.39
PDZD4-209ENST00000544474 SLC1A7O00341 560 aa12.59□□□□□ -0.39
PDZD4-209ENST00000544474 PRMT5O14744 637 aaPredicted RBP12.59□□□□□ -0.39
PDZD4-209ENST00000544474 DCLK1O15075 740 aa12.59□□□□□ -0.39
PDZD4-209ENST00000544474 WDR47O94967 919 aa12.59□□□□□ -0.39
PDZD4-209ENST00000544474 FCGR1AP12314 374 aa12.59□□□□□ -0.39
PDZD4-209ENST00000544474 SSTR4P31391 388 aa12.59□□□□□ -0.39
PDZD4-209ENST00000544474 SCNN1AP37088 669 aa12.59□□□□□ -0.39
PDZD4-209ENST00000544474 GP2P55259 537 aaKnown RBP12.59□□□□□ -0.39
PDZD4-209ENST00000544474 PON2Q15165 354 aa12.59□□□□□ -0.39
PDZD4-209ENST00000544474 YIF1BQ5BJH7 314 aa12.59□□□□□ -0.39
PDZD4-209ENST00000544474 SYCE2Q6PIF2 218 aa12.59□□□□□ -0.39
PDZD4-209ENST00000544474 METTL4Q8N3J2 472 aa12.59□□□□□ -0.39
PDZD4-209ENST00000544474 OR2T12Q8NG77 320 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms