RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 PLAGL1Q9UM63 463 aa13.37□□□□□ -0.27
HCFC2-202ENST00000544223 CA5BQ9Y2D0 317 aa13.37□□□□□ -0.27
HCFC2-202ENST00000544223 CLGNO14967 610 aa13.37□□□□□ -0.27
HCFC2-202ENST00000544223 SYNCRIPO60506 623 aaKnown RBP13.37□□□□□ -0.27
HCFC2-202ENST00000544223 STK16O75716 305 aa13.37□□□□□ -0.27
HCFC2-202ENST00000544223 MLYCDO95822 493 aa13.37□□□□□ -0.27
HCFC2-202ENST00000544223 UROSP10746 265 aa13.37□□□□□ -0.27
HCFC2-202ENST00000544223 CTHP32929 405 aa13.37□□□□□ -0.27
HCFC2-202ENST00000544223 INPP5AQ14642 412 aa13.37□□□□□ -0.27
HCFC2-202ENST00000544223 SF1Q15637 639 aaKnown RBP13.37□□□□□ -0.27
HCFC2-202ENST00000544223 HEATR4Q86WZ0 1026 aa13.37□□□□□ -0.27
HCFC2-202ENST00000544223 PHC3Q8NDX5 983 aa13.37□□□□□ -0.27
HCFC2-202ENST00000544223 PARVBQ9HBI1 364 aa13.37□□□□□ -0.27
HCFC2-202ENST00000544223 ZFR2Q9UPR6 939 aaKnown RBP13.37□□□□□ -0.27
HCFC2-202ENST00000544223 C1QTNF3-AMACRE9PGA6 284 aa13.36□□□□□ -0.27
HCFC2-202ENST00000544223 HNRNPCL1O60812 293 aaKnown RBP13.36□□□□□ -0.27
HCFC2-202ENST00000544223 KLF8O95600 359 aaPredicted RBP13.36□□□□□ -0.27
HCFC2-202ENST00000544223 THRAP10827 490 aa13.36□□□□□ -0.27
HCFC2-202ENST00000544223 GPX3P22352 226 aa13.36□□□□□ -0.27
HCFC2-202ENST00000544223 CASP2P42575 452 aa13.36□□□□□ -0.27
HCFC2-202ENST00000544223 VASPP50552 380 aaPredicted RBP13.36□□□□□ -0.27
HCFC2-202ENST00000544223 UFM1P61960 85 aa13.36□□□□□ -0.27
HCFC2-202ENST00000544223 ELP6Q0PNE2 266 aa13.36□□□□□ -0.27
HCFC2-202ENST00000544223 WSCD2Q2TBF2 565 aa13.36□□□□□ -0.27
HCFC2-202ENST00000544223 PREPLQ4J6C6 727 aaPredicted RBP13.36□□□□□ -0.27
HCFC2-202ENST00000544223 RFTN2Q52LD8 501 aaPredicted RBP13.36□□□□□ -0.27
HCFC2-202ENST00000544223 RETREG3Q86VR2 466 aa13.36□□□□□ -0.27
HCFC2-202ENST00000544223 FNDC5Q8NAU1 212 aa13.36□□□□□ -0.27
HCFC2-202ENST00000544223 OR14C36Q8NHC7 312 aa13.36□□□□□ -0.27
HCFC2-202ENST00000544223 ASZ1Q8WWH4 475 aa13.36□□□□□ -0.27
HCFC2-202ENST00000544223 TMEM159Q96B96 161 aa13.36□□□□□ -0.27
HCFC2-202ENST00000544223 ZNF382Q96SR6 550 aa13.36□□□□□ -0.27
HCFC2-202ENST00000544223 INTS7Q9NVH2 962 aaKnown RBP13.36□□□□□ -0.27
HCFC2-202ENST00000544223 FBXL12Q9NXK8 326 aa13.36□□□□□ -0.27
HCFC2-202ENST00000544223 PIAS3Q9Y6X2 628 aa13.36□□□□□ -0.27
HCFC2-202ENST00000544223 ATG13O75143 517 aa13.36□□□□□ -0.27
HCFC2-202ENST00000544223 FUCA1P04066 466 aa13.36□□□□□ -0.27
HCFC2-202ENST00000544223 ANXA5P08758 320 aa13.36□□□□□ -0.27
HCFC2-202ENST00000544223 EZRP15311 586 aaKnown RBP13.36□□□□□ -0.27
HCFC2-202ENST00000544223 MNAT1P51948 309 aa13.36□□□□□ -0.27
HCFC2-202ENST00000544223 GBX1Q14549 363 aa13.36□□□□□ -0.27
HCFC2-202ENST00000544223 RCN1Q15293 331 aa13.36□□□□□ -0.27
HCFC2-202ENST00000544223 MMEL1Q495T6 779 aa13.36□□□□□ -0.27
HCFC2-202ENST00000544223 LDLRAP1Q5SW96 308 aa13.36□□□□□ -0.27
HCFC2-202ENST00000544223 CLHC1Q8NHS4 586 aa13.36□□□□□ -0.27
HCFC2-202ENST00000544223 PYDC1Q8WXC3 89 aa13.36□□□□□ -0.27
HCFC2-202ENST00000544223 RTKNQ9BST9 563 aa13.36□□□□□ -0.27
HCFC2-202ENST00000544223 SLC12A9Q9BXP2 914 aa13.36□□□□□ -0.27
HCFC2-202ENST00000544223 KCNK12Q9HB15 430 aa13.36□□□□□ -0.27
HCFC2-202ENST00000544223 MRPL40Q9NQ50 206 aaKnown RBP13.36□□□□□ -0.27
HCFC2-202ENST00000544223 SLAMF8Q9P0V8 285 aa13.36□□□□□ -0.27
HCFC2-202ENST00000544223 NUP214P35658 2090 aaPredicted RBP13.35□□□□□ -0.27
HCFC2-202ENST00000544223 DENND4AQ7Z401 1863 aa13.35□□□□□ -0.27
HCFC2-202ENST00000544223 K7EPI3 171 aa13.35□□□□□ -0.27
HCFC2-202ENST00000544223 NUAK1O60285 661 aa13.35□□□□□ -0.27
HCFC2-202ENST00000544223 LILRB5O75023 590 aa13.35□□□□□ -0.27
HCFC2-202ENST00000544223 SLC16A8O95907 504 aa13.35□□□□□ -0.27
HCFC2-202ENST00000544223 CAPN3P20807 821 aa13.35□□□□□ -0.27
HCFC2-202ENST00000544223 PRLHRP49683 370 aa13.35□□□□□ -0.27
HCFC2-202ENST00000544223 THOP1P52888 689 aa13.35□□□□□ -0.27
HCFC2-202ENST00000544223 CAPRIN1Q14444 709 aaKnown RBP13.35□□□□□ -0.27
HCFC2-202ENST00000544223 SKIV2LQ15477 1246 aaKnown RBP13.35□□□□□ -0.27
HCFC2-202ENST00000544223 SULT1C3Q6IMI6 304 aa13.35□□□□□ -0.27
HCFC2-202ENST00000544223 TRMT11Q7Z4G4 463 aaKnown RBP13.35□□□□□ -0.27
HCFC2-202ENST00000544223 SUGP1Q8IWZ8 645 aaKnown RBP13.35□□□□□ -0.27
HCFC2-202ENST00000544223 FRMD1Q8N878 549 aa13.35□□□□□ -0.27
HCFC2-202ENST00000544223 KYQ8NBH2 561 aa13.35□□□□□ -0.27
HCFC2-202ENST00000544223 RP9Q8TA86 221 aaKnown RBP13.35□□□□□ -0.27
HCFC2-202ENST00000544223 C19orf43Q9BQ61 176 aa13.35□□□□□ -0.27
HCFC2-202ENST00000544223 CCM2Q9BSQ5 444 aa13.35□□□□□ -0.27
HCFC2-202ENST00000544223 RSPH9Q9H1X1 276 aaPredicted RBP13.35□□□□□ -0.27
HCFC2-202ENST00000544223 WDR41Q9HAD4 459 aa13.35□□□□□ -0.27
HCFC2-202ENST00000544223 PLEKHM1Q9Y4G2 1056 aa13.35□□□□□ -0.27
HCFC2-202ENST00000544223 A0A1W2PQF6 199 aa13.35□□□□□ -0.27
HCFC2-202ENST00000544223 H0Y858 1186 aa13.35□□□□□ -0.27
HCFC2-202ENST00000544223 SLC31A1O15431 190 aa13.35□□□□□ -0.27
HCFC2-202ENST00000544223 RSL1D1O76021 490 aaKnown RBP13.35□□□□□ -0.27
HCFC2-202ENST00000544223 HIST1H2AGP0C0S8 130 aaPredicted RBP13.35□□□□□ -0.27
HCFC2-202ENST00000544223 EPB42P16452 691 aa13.35□□□□□ -0.27
HCFC2-202ENST00000544223 HIST1H2ADP20671 130 aa13.35□□□□□ -0.27
HCFC2-202ENST00000544223 HMOX2P30519 316 aa13.35□□□□□ -0.27
HCFC2-202ENST00000544223 RPS14P62263 151 aaKnown RBP13.35□□□□□ -0.27
HCFC2-202ENST00000544223 ILF2Q12905 390 aaKnown RBP13.35□□□□□ -0.27
HCFC2-202ENST00000544223 PRKG2Q13237 762 aa13.35□□□□□ -0.27
HCFC2-202ENST00000544223 ART3Q13508 389 aa13.35□□□□□ -0.27
HCFC2-202ENST00000544223 PTK2BQ14289 1009 aa13.35□□□□□ -0.27
HCFC2-202ENST00000544223 SQLEQ14534 574 aa13.35□□□□□ -0.27
HCFC2-202ENST00000544223 NR6A1Q15406 480 aa13.35□□□□□ -0.27
HCFC2-202ENST00000544223 DNAL1Q4LDG9 190 aa13.35□□□□□ -0.27
HCFC2-202ENST00000544223 C6orf136Q5SQH8 315 aa13.35□□□□□ -0.27
HCFC2-202ENST00000544223 REP15Q6BDI9 236 aa13.35□□□□□ -0.27
HCFC2-202ENST00000544223 HIST1H2AHQ96KK5 128 aa13.35□□□□□ -0.27
HCFC2-202ENST00000544223 VPS35Q96QK1 796 aa13.35□□□□□ -0.27
HCFC2-202ENST00000544223 HIST1H2AJQ99878 128 aa13.35□□□□□ -0.27
HCFC2-202ENST00000544223 H2AFJQ9BTM1 129 aa13.35□□□□□ -0.27
HCFC2-202ENST00000544223 C1orf21Q9H246 121 aa13.35□□□□□ -0.27
HCFC2-202ENST00000544223 ACTR8Q9H981 624 aa13.35□□□□□ -0.27
HCFC2-202ENST00000544223 SH2B3Q9UQQ2 575 aa13.35□□□□□ -0.27
HCFC2-202ENST00000544223 ST14Q9Y5Y6 855 aa13.35□□□□□ -0.27
HCFC2-202ENST00000544223 GFYI3L273 518 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms