RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 POLR2J2Q9GZM3 115 aaKnown RBP19.04■□□□□ 0.64
SUDS3-204ENST00000543473 PCDHGC4Q9Y5F7 938 aa19.04■□□□□ 0.64
SUDS3-204ENST00000543473 ILVBLA1L0T0 632 aa19.04■□□□□ 0.64
SUDS3-204ENST00000543473 KHDRBS3O75525 346 aaKnown RBP19.04■□□□□ 0.64
SUDS3-204ENST00000543473 CCNB2O95067 398 aa19.04■□□□□ 0.64
SUDS3-204ENST00000543473 ENO2P09104 434 aaPredicted RBP19.04■□□□□ 0.64
SUDS3-204ENST00000543473 PRKACGP22612 351 aa19.04■□□□□ 0.64
SUDS3-204ENST00000543473 PAX3P23760 479 aa19.04■□□□□ 0.64
SUDS3-204ENST00000543473 DNAJA1P31689 397 aaKnown RBP19.04■□□□□ 0.64
SUDS3-204ENST00000543473 RNASE12Q5GAN4 147 aaKnown RBP19.04■□□□□ 0.64
SUDS3-204ENST00000543473 DCST1Q5T197 706 aa19.04■□□□□ 0.64
SUDS3-204ENST00000543473 SLC35F5Q8WV83 523 aa19.04■□□□□ 0.64
SUDS3-204ENST00000543473 C8orf48Q96LL4 319 aa19.04■□□□□ 0.64
SUDS3-204ENST00000543473 ATG10Q9H0Y0 220 aa19.04■□□□□ 0.64
SUDS3-204ENST00000543473 SMURF2Q9HAU4 748 aa19.04■□□□□ 0.64
SUDS3-204ENST00000543473 GULP1Q9UBP9 304 aa19.04■□□□□ 0.64
SUDS3-204ENST00000543473 SPPL2BQ8TCT7 592 aa19.04■□□□□ 0.64
SUDS3-204ENST00000543473 FIZ1Q96SL8 496 aa19.04■□□□□ 0.64
SUDS3-204ENST00000543473 FAIM2Q9BWQ8 316 aa19.04■□□□□ 0.64
SUDS3-204ENST00000543473 OXCT2Q9BYC2 517 aaPredicted RBP19.04■□□□□ 0.64
SUDS3-204ENST00000543473 SLC7A5P2Q9GIP4 190 aa19.04■□□□□ 0.64
SUDS3-204ENST00000543473 IRF2BPLQ9H1B7 796 aa19.04■□□□□ 0.64
SUDS3-204ENST00000543473 VPS51Q9UID3 782 aa19.04■□□□□ 0.64
SUDS3-204ENST00000543473 FKBPLQ9UIM3 349 aa19.04■□□□□ 0.64
SUDS3-204ENST00000543473 CLEC4AQ9UMR7 237 aa19.04■□□□□ 0.64
SUDS3-204ENST00000543473 NUP188Q5SRE5 1749 aa19.04■□□□□ 0.64
SUDS3-204ENST00000543473 TCAF2A6NFQ2 919 aa19.03■□□□□ 0.64
SUDS3-204ENST00000543473 OR6C70A6NIJ9 312 aa19.03■□□□□ 0.64
SUDS3-204ENST00000543473 FYNP06241 537 aa19.03■□□□□ 0.64
SUDS3-204ENST00000543473 PTX3P26022 381 aaPredicted RBP19.03■□□□□ 0.64
SUDS3-204ENST00000543473 IFI44LQ53G44 452 aa19.03■□□□□ 0.64
SUDS3-204ENST00000543473 OR2T5Q6IEZ7 315 aa19.03■□□□□ 0.64
SUDS3-204ENST00000543473 SULT1C3Q6IMI6 304 aa19.03■□□□□ 0.64
SUDS3-204ENST00000543473 ZNF517Q6ZMY9 492 aaPredicted RBP19.03■□□□□ 0.64
SUDS3-204ENST00000543473 OR2T29Q8NH02 315 aa19.03■□□□□ 0.64
SUDS3-204ENST00000543473 COL26A1Q96A83 441 aa19.03■□□□□ 0.64
SUDS3-204ENST00000543473 MOCOSQ96EN8 888 aa19.03■□□□□ 0.64
SUDS3-204ENST00000543473 MYO19Q96H55 970 aa19.03■□□□□ 0.64
SUDS3-204ENST00000543473 KIFC1Q9BW19 673 aa19.03■□□□□ 0.64
SUDS3-204ENST00000543473 ADAMTS10Q9H324 1103 aa19.03■□□□□ 0.64
SUDS3-204ENST00000543473 CNOT11Q9UKZ1 510 aaKnown RBP19.03■□□□□ 0.64
SUDS3-204ENST00000543473 MAP4K5Q9Y4K4 846 aa19.03■□□□□ 0.64
SUDS3-204ENST00000543473 STON1Q9Y6Q2 735 aa19.03■□□□□ 0.64
SUDS3-204ENST00000543473 QSOX1O00391 747 aa19.03■□□□□ 0.64
SUDS3-204ENST00000543473 ANXA8P13928 327 aa19.03■□□□□ 0.64
SUDS3-204ENST00000543473 EFNA1P20827 205 aaPredicted RBP19.03■□□□□ 0.64
SUDS3-204ENST00000543473 NDST2P52849 883 aa19.03■□□□□ 0.64
SUDS3-204ENST00000543473 E2F2Q14209 437 aa19.03■□□□□ 0.64
SUDS3-204ENST00000543473 TEAD4Q15561 434 aa19.03■□□□□ 0.64
SUDS3-204ENST00000543473 HDAC2Q92769 488 aaKnown RBP19.03■□□□□ 0.64
SUDS3-204ENST00000543473 IQCF5A8MTL0 148 aa19.03■□□□□ 0.64
SUDS3-204ENST00000543473 H0YAE9 185 aa19.03■□□□□ 0.64
SUDS3-204ENST00000543473 ERAL1O75616 437 aaKnown RBP19.03■□□□□ 0.64
SUDS3-204ENST00000543473 HLA-DQB2P05538 268 aa19.03■□□□□ 0.64
SUDS3-204ENST00000543473 GLDCP23378 1020 aa19.03■□□□□ 0.64
SUDS3-204ENST00000543473 VARSP26640 1264 aaKnown RBP19.03■□□□□ 0.64
SUDS3-204ENST00000543473 GMFBP60983 142 aa19.03■□□□□ 0.64
SUDS3-204ENST00000543473 TUBA3EQ6PEY2 450 aa19.03■□□□□ 0.64
SUDS3-204ENST00000543473 PIWIL1Q96J94 861 aaKnown RBP19.03■□□□□ 0.64
SUDS3-204ENST00000543473 MFSD1Q9H3U5 465 aa19.03■□□□□ 0.64
SUDS3-204ENST00000543473 SEMA3GQ9NS98 782 aa19.03■□□□□ 0.64
SUDS3-204ENST00000543473 OAS3Q9Y6K5 1087 aaKnown RBP19.03■□□□□ 0.64
SUDS3-204ENST00000543473 CLDN11O75508 207 aa19.03■□□□□ 0.64
SUDS3-204ENST00000543473 ECI2O75521 394 aa19.03■□□□□ 0.64
SUDS3-204ENST00000543473 OR5F1O95221 314 aa19.03■□□□□ 0.64
SUDS3-204ENST00000543473 CCNYL3P0C7X3 344 aa19.03■□□□□ 0.64
SUDS3-204ENST00000543473 PSKH1P11801 424 aa19.03■□□□□ 0.64
SUDS3-204ENST00000543473 IFI30P13284 250 aa19.03■□□□□ 0.64
SUDS3-204ENST00000543473 PCSK2P16519 638 aa19.03■□□□□ 0.64
SUDS3-204ENST00000543473 ARHGAP1Q07960 439 aa19.03■□□□□ 0.64
SUDS3-204ENST00000543473 PRR23BQ6ZRT6 265 aa19.03■□□□□ 0.64
SUDS3-204ENST00000543473 GALNT12Q8IXK2 581 aa19.03■□□□□ 0.64
SUDS3-204ENST00000543473 OR13C4Q8NGS5 318 aa19.03■□□□□ 0.64
SUDS3-204ENST00000543473 TRNT1Q96Q11 434 aaKnown RBP19.03■□□□□ 0.64
SUDS3-204ENST00000543473 EBPLQ9BY08 206 aa19.03■□□□□ 0.64
SUDS3-204ENST00000543473 MALT1Q9UDY8 824 aa19.03■□□□□ 0.64
SUDS3-204ENST00000543473 PFDN2Q9UHV9 154 aa19.03■□□□□ 0.64
SUDS3-204ENST00000543473 PCDHGB3Q9Y5G1 929 aa19.03■□□□□ 0.64
SUDS3-204ENST00000543473 GLYATL1P3A0A0U1RQE8 302 aa19.02■□□□□ 0.64
SUDS3-204ENST00000543473 KERAO60938 352 aa19.02■□□□□ 0.64
SUDS3-204ENST00000543473 PROZP22891 400 aa19.02■□□□□ 0.64
SUDS3-204ENST00000543473 PTGER3P43115 390 aa19.02■□□□□ 0.64
SUDS3-204ENST00000543473 HMGCS1Q01581 520 aa19.02■□□□□ 0.64
SUDS3-204ENST00000543473 PAFAH1B3Q15102 231 aaKnown RBP19.02■□□□□ 0.64
SUDS3-204ENST00000543473 CRTC2Q53ET0 693 aaPredicted RBP19.02■□□□□ 0.64
SUDS3-204ENST00000543473 PIGGQ5H8A4 983 aa19.02■□□□□ 0.64
SUDS3-204ENST00000543473 SLC24A5Q71RS6 500 aa19.02■□□□□ 0.64
SUDS3-204ENST00000543473 PIM3Q86V86 326 aa19.02■□□□□ 0.64
SUDS3-204ENST00000543473 FIBCD1Q8N539 461 aa19.02■□□□□ 0.64
SUDS3-204ENST00000543473 HJURPQ8NCD3 748 aaPredicted RBP19.02■□□□□ 0.64
SUDS3-204ENST00000543473 C9orf43Q8TAL5 461 aaPredicted RBP19.02■□□□□ 0.64
SUDS3-204ENST00000543473 C11orf16Q9NQ32 467 aa19.02■□□□□ 0.64
SUDS3-204ENST00000543473 COMMD3Q9UBI1 195 aa19.02■□□□□ 0.64
SUDS3-204ENST00000543473 MKLN1Q9UL63 735 aa19.02■□□□□ 0.64
SUDS3-204ENST00000543473 ARL5AQ9Y689 179 aa19.02■□□□□ 0.64
SUDS3-204ENST00000543473 TRIM64CA6NLI5 447 aa19.02■□□□□ 0.64
SUDS3-204ENST00000543473 CHST10O43529 356 aa19.02■□□□□ 0.64
SUDS3-204ENST00000543473 TAF10Q12962 218 aa19.02■□□□□ 0.64
SUDS3-204ENST00000543473 IFNL1Q8IU54 200 aa19.02■□□□□ 0.64
SUDS3-204ENST00000543473 TMEM199Q8N511 208 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms