RNA–Protein interactions for RNA: ENST00000543170.5

COPS7A-216, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-216ENST00000543170 C9orf72Q96LT7 481 aa17.89■□□□□ 0.45
COPS7A-216ENST00000543170 CD180Q99467 661 aa17.89■□□□□ 0.45
COPS7A-216ENST00000543170 HGH1Q9BTY7 390 aa17.89■□□□□ 0.45
COPS7A-216ENST00000543170 DMGDHQ9UI17 866 aaKnown RBP17.89■□□□□ 0.45
COPS7A-216ENST00000543170 FRYQ5TBA9 3013 aa17.89■□□□□ 0.45
COPS7A-216ENST00000543170 WDFY3Q8IZQ1 3526 aa17.89■□□□□ 0.45
COPS7A-216ENST00000543170 IGF2RP11717 2491 aa17.89■□□□□ 0.45
COPS7A-216ENST00000543170 EIF3FO00303 357 aaPredicted RBP17.88■□□□□ 0.45
COPS7A-216ENST00000543170 CAPN5O15484 640 aaPredicted RBP17.88■□□□□ 0.45
COPS7A-216ENST00000543170 VPS26AO75436 327 aa17.88■□□□□ 0.45
COPS7A-216ENST00000543170 SPAG6O75602 509 aa17.88■□□□□ 0.45
COPS7A-216ENST00000543170 AHSGP02765 367 aa17.88■□□□□ 0.45
COPS7A-216ENST00000543170 ITGA2BP08514 1039 aa17.88■□□□□ 0.45
COPS7A-216ENST00000543170 F7P08709 466 aaPredicted RBP17.88■□□□□ 0.45
COPS7A-216ENST00000543170 GABRB3P28472 473 aa17.88■□□□□ 0.45
COPS7A-216ENST00000543170 GFERP55789 205 aa17.88■□□□□ 0.45
COPS7A-216ENST00000543170 NEK10Q6ZWH5 1172 aa17.88■□□□□ 0.45
COPS7A-216ENST00000543170 DCUN1D3Q8IWE4 304 aa17.88■□□□□ 0.45
COPS7A-216ENST00000543170 PALM2Q8IXS6 379 aa17.88■□□□□ 0.45
COPS7A-216ENST00000543170 CARFQ8N187 725 aa17.88■□□□□ 0.45
COPS7A-216ENST00000543170 FBXO39Q8N4B4 442 aa17.88■□□□□ 0.45
COPS7A-216ENST00000543170 AGBL5Q8NDL9 886 aa17.88■□□□□ 0.45
COPS7A-216ENST00000543170 PHC3Q8NDX5 983 aa17.88■□□□□ 0.45
COPS7A-216ENST00000543170 LCN9Q8WX39 176 aa17.88■□□□□ 0.45
COPS7A-216ENST00000543170 TSPYL1Q9H0U9 437 aa17.88■□□□□ 0.45
COPS7A-216ENST00000543170 SEMA5BQ9P283 1151 aa17.88■□□□□ 0.45
COPS7A-216ENST00000543170 MTRF1LQ9UGC7 380 aaKnown RBP17.88■□□□□ 0.45
COPS7A-216ENST00000543170 AK5Q9Y6K8 562 aa17.88■□□□□ 0.45
COPS7A-216ENST00000543170 FREM2Q5SZK8 3169 aa17.88■□□□□ 0.45
COPS7A-216ENST00000543170 BRINP1O60477 761 aa17.87■□□□□ 0.45
COPS7A-216ENST00000543170 ENO3P13929 434 aaPredicted RBP17.87■□□□□ 0.45
COPS7A-216ENST00000543170 SHMT2P34897 504 aa17.87■□□□□ 0.45
COPS7A-216ENST00000543170 MAGEA4P43358 317 aa17.87■□□□□ 0.45
COPS7A-216ENST00000543170 ERVPABLB-1P60509 514 aa17.87■□□□□ 0.45
COPS7A-216ENST00000543170 CYP4F3Q08477 520 aa17.87■□□□□ 0.45
COPS7A-216ENST00000543170 UGT3A1Q6NUS8 523 aa17.87■□□□□ 0.45
COPS7A-216ENST00000543170 RELL1Q8IUW5 271 aa17.87■□□□□ 0.45
COPS7A-216ENST00000543170 RCBTB1Q8NDN9 531 aa17.87■□□□□ 0.45
COPS7A-216ENST00000543170 GIMAP7Q8NHV1 300 aa17.87■□□□□ 0.45
COPS7A-216ENST00000543170 CD200R1Q8TD46 325 aa17.87■□□□□ 0.45
COPS7A-216ENST00000543170 JPH3Q8WXH2 748 aaPredicted RBP17.87■□□□□ 0.45
COPS7A-216ENST00000543170 CDKL2Q92772 493 aa17.87■□□□□ 0.45
COPS7A-216ENST00000543170 ZNF578Q96N58 590 aaPredicted RBP17.87■□□□□ 0.45
COPS7A-216ENST00000543170 FOPNLQ96NB1 174 aa17.87■□□□□ 0.45
COPS7A-216ENST00000543170 CNTNAP3BQ96NU0 1288 aa17.87■□□□□ 0.45
COPS7A-216ENST00000543170 TGM7Q96PF1 710 aa17.87■□□□□ 0.45
COPS7A-216ENST00000543170 CNTNAP3Q9BZ76 1288 aa17.87■□□□□ 0.45
COPS7A-216ENST00000543170 B3GNT4Q9C0J1 378 aa17.87■□□□□ 0.45
COPS7A-216ENST00000543170 TWSG1Q9GZX9 223 aa17.87■□□□□ 0.45
COPS7A-216ENST00000543170 SRMSQ9H3Y6 488 aa17.87■□□□□ 0.45
COPS7A-216ENST00000543170 ZNF768Q9H5H4 540 aaKnown RBP17.87■□□□□ 0.45
COPS7A-216ENST00000543170 ASCL3Q9NQ33 180 aa17.87■□□□□ 0.45
COPS7A-216ENST00000543170 SLC17A6Q9P2U8 582 aa17.87■□□□□ 0.45
COPS7A-216ENST00000543170 DHRS7Q9Y394 339 aa17.87■□□□□ 0.45
COPS7A-216ENST00000543170 ADAMTS20P59510 1910 aa17.86■□□□□ 0.45
COPS7A-216ENST00000543170 APC2O95996 2303 aa17.86■□□□□ 0.45
COPS7A-216ENST00000543170 ACACAQ13085 2346 aa17.86■□□□□ 0.45
COPS7A-216ENST00000543170 TCRBV9S1A1TA0A576 114 aa17.86■□□□□ 0.45
COPS7A-216ENST00000543170 CDRT15L2A8MXV6 281 aa17.86■□□□□ 0.45
COPS7A-216ENST00000543170 MATN4O95460 622 aa17.86■□□□□ 0.45
COPS7A-216ENST00000543170 JMJD7P0C870 316 aa17.86■□□□□ 0.45
COPS7A-216ENST00000543170 CBSLP0DN79 551 aa17.86■□□□□ 0.45
COPS7A-216ENST00000543170 MPSTP25325 297 aa17.86■□□□□ 0.45
COPS7A-216ENST00000543170 SSTR1P30872 391 aa17.86■□□□□ 0.45
COPS7A-216ENST00000543170 CSTF2P33240 577 aaKnown RBP eCLIP17.86■□□□□ 0.45
COPS7A-216ENST00000543170 CBSP35520 551 aa17.86■□□□□ 0.45
COPS7A-216ENST00000543170 CCNFP41002 786 aa17.86■□□□□ 0.45
COPS7A-216ENST00000543170 SKIV2L2P42285 1042 aaKnown RBP17.86■□□□□ 0.45
COPS7A-216ENST00000543170 PRKAA1Q13131 559 aa17.86■□□□□ 0.45
COPS7A-216ENST00000543170 TBC1D25Q3MII6 688 aa17.86■□□□□ 0.45
COPS7A-216ENST00000543170 LRRC8EQ6NSJ5 796 aa17.86■□□□□ 0.45
COPS7A-216ENST00000543170 CLEC14AQ86T13 490 aa17.86■□□□□ 0.45
COPS7A-216ENST00000543170 AMIGO1Q86WK6 493 aa17.86■□□□□ 0.45
COPS7A-216ENST00000543170 CCDC25Q86WR0 208 aa17.86■□□□□ 0.45
COPS7A-216ENST00000543170 SIDT2Q8NBJ9 832 aaKnown RBP17.86■□□□□ 0.45
COPS7A-216ENST00000543170 MDM1Q8TC05 714 aa17.86■□□□□ 0.45
COPS7A-216ENST00000543170 ZCCHC14Q8WYQ9 949 aaKnown RBP17.86■□□□□ 0.45
COPS7A-216ENST00000543170 UBXN4Q92575 508 aa17.86■□□□□ 0.45
COPS7A-216ENST00000543170 INPP5DQ92835 1189 aa17.86■□□□□ 0.45
COPS7A-216ENST00000543170 FAM136AQ96C01 138 aa17.86■□□□□ 0.45
COPS7A-216ENST00000543170 SLC46A1Q96NT5 459 aa17.86■□□□□ 0.45
COPS7A-216ENST00000543170 GPR21Q99679 349 aa17.86■□□□□ 0.45
COPS7A-216ENST00000543170 THSD1Q9NS62 852 aa17.86■□□□□ 0.45
COPS7A-216ENST00000543170 HRASLS2Q9NWW9 162 aa17.86■□□□□ 0.45
COPS7A-216ENST00000543170 TAS2R13Q9NYV9 303 aa17.86■□□□□ 0.45
COPS7A-216ENST00000543170 GALPQ9UBC7 116 aa17.86■□□□□ 0.45
COPS7A-216ENST00000543170 ICKQ9UPZ9 632 aa17.86■□□□□ 0.45
COPS7A-216ENST00000543170 PCDHGA7Q9Y5G6 932 aa17.86■□□□□ 0.45
COPS7A-216ENST00000543170 OR6C74A6NCV1 312 aa17.85■□□□□ 0.45
COPS7A-216ENST00000543170 TLCD2A6NGC4 264 aa17.85■□□□□ 0.45
COPS7A-216ENST00000543170 B4E171 279 aa17.85■□□□□ 0.45
COPS7A-216ENST00000543170 MPC1LP0DKB6 136 aa17.85■□□□□ 0.45
COPS7A-216ENST00000543170 RBMS1P29558 406 aaKnown RBP17.85■□□□□ 0.45
COPS7A-216ENST00000543170 ECHS1P30084 290 aa17.85■□□□□ 0.45
COPS7A-216ENST00000543170 TSPAN7P41732 249 aa17.85■□□□□ 0.45
COPS7A-216ENST00000543170 GPX6P59796 221 aa17.85■□□□□ 0.45
COPS7A-216ENST00000543170 PRKG2Q13237 762 aa17.85■□□□□ 0.45
COPS7A-216ENST00000543170 CUL1Q13616 776 aa17.85■□□□□ 0.45
COPS7A-216ENST00000543170 ACSBG2Q5FVE4 666 aa17.85■□□□□ 0.45
COPS7A-216ENST00000543170 FAM45BPQ6NSW5 357 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms