RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 NCOA3Q9Y6Q9 1424 aa3.84□□□□□ -1.79
SFSWAP-211ENST00000542813 ARHGAP35Q9NRY4 1499 aa3.84□□□□□ -1.8
SFSWAP-211ENST00000542813 ASXL1Q8IXJ9 1541 aa3.84□□□□□ -1.8
SFSWAP-211ENST00000542813 UNC13BO14795 1591 aa3.84□□□□□ -1.8
SFSWAP-211ENST00000542813 MAST1Q9Y2H9 1570 aa3.84□□□□□ -1.8
SFSWAP-211ENST00000542813 UBR1Q8IWV7 1749 aa3.84□□□□□ -1.8
SFSWAP-211ENST00000542813 CEP350Q5VT06 3117 aa3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 FEZF1A0PJY2 475 aa3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 C5orf51A6NDU8 294 aa3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 TARM1B6A8C7 271 aa3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 SMIM22K7EJ46 135 aa3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 MEIS2O14770 477 aa3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 PLSCR1O15162 318 aa3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 SLC16A5O15375 505 aa3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 AP5Z1O43299 807 aa3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 ZNF217O75362 1048 aa3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 NME6O75414 186 aaPredicted RBP3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 FRAT2O75474 233 aaPredicted RBP3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 IFNB1P01574 187 aa3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 FGBP02675 491 aa3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 C8orf89P0DMQ9 161 aa3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 CCDC192P0DO97 292 aa3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 ARF4P18085 180 aaPredicted RBP3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 LBPP18428 481 aa3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 AHCYP23526 432 aa3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 HRH2P25021 359 aa3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 SERPINB6P35237 376 aa3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 TNNT2P45379 298 aaPredicted RBP3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 ME1P48163 572 aa3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 CDH12P55289 794 aa3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 INHBEP58166 350 aa3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 POLR2LP62875 67 aaKnown RBP3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 HSF1Q00613 529 aa3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 SYT16Q17RD7 645 aa3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 DCST1Q5T197 706 aa3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 PRAMEF8Q5VWM4 474 aa3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 NOTUMQ6P988 496 aa3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 ZCCHC12Q6PEW1 402 aa3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 BRAT1Q6PJG6 821 aa3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 CASC1Q6TDU7 716 aa3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 MFSD7Q6UXD7 560 aa3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 TOM1L2Q6ZVM7 507 aa3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 MTERF4Q7Z6M4 381 aaKnown RBP3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 MRGPREQ86SM8 312 aa3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 CHSY1Q86X52 802 aa3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 FOXP4Q8IVH2 680 aaPredicted RBP3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 SERPINA12Q8IW75 414 aa3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 PNLDC1Q8NA58 520 aaKnown RBP3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 OR2AJ1Q8NGZ0 328 aa3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 B4GALNT2Q8NHY0 566 aa3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 EXOC6Q8TAG9 804 aa3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 ARRDC2Q8TBH0 407 aa3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 CCDC110Q8TBZ0 833 aa3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 KIAA1524Q8TCG1 905 aa3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 ZNF398Q8TD17 642 aa3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 GPT2Q8TD30 523 aa3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 LRRC8CQ8TDW0 803 aa3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 RIT1Q92963 219 aa3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 SNRNP40Q96DI7 357 aaKnown RBP3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 PRMT6Q96LA8 375 aaPredicted RBP3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 GDAP1L1Q96MZ0 367 aa3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 SPATA33Q96N06 139 aa3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 SFXN2Q96NB2 322 aa3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 PLEKHG4BQ96PX9 1271 aa3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 OR6C1Q96RD1 312 aa3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 GFI1Q99684 422 aa3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 MSTO1Q9BUK6 570 aa3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 FNDC11Q9BVV2 318 aa3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 TEX13BQ9BXU2 312 aa3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 NYXQ9GZU5 481 aa3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 P2RY12Q9H244 342 aa3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 DPH5Q9H2P9 285 aa3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 KCNN2Q9H2S1 579 aa3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 SRD5A3Q9H8P0 318 aa3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 C17orf75Q9HAS0 396 aa3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 MMP25Q9NPA2 562 aa3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 POLE3Q9NRF9 147 aa3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 IL17RBQ9NRM6 502 aa3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 DCAF16Q9NXF7 216 aa3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 FLRT1Q9NZU1 646 aa3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 STRAPQ9Y3F4 350 aaKnown RBP3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 TMEM184BQ9Y519 407 aaPredicted RBP3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 CLCA3PQ9Y6N3 262 aa3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 ASTN2O75129 1339 aaPredicted RBP3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 DCCP43146 1447 aa3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 MROH1Q8NDA8 1641 aa3.83□□□□□ -1.8
SFSWAP-211ENST00000542813 CDC42BPAQ5VT25 1732 aa3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 EFCAB6Q5THR3 1501 aa3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 CCDC141Q6ZP82 1450 aa3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 PTCH1Q13635 1447 aa3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 CCDC7Q96M83 1385 aa3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 SYNJ2BP-COX16A0A087WUM0 186 aa3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 KIR2DS5A0A0G2JLQ3 304 aa3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 A0A1W2PPQ1 181 aa3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 HEPACAM2A8MVW5 462 aa3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 STMND1H3BQB6 276 aa3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 TMEM189-UBE2V1I3L0A0 370 aa3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 J3QR06 171 aa3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 KIR2DS3K7RE56 304 aa3.82□□□□□ -1.8
SFSWAP-211ENST00000542813 PPIP5K2O43314 1243 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms