RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 ABRAXAS2Q15018 415 aa15.8■□□□□ 0.12
VARS2-212ENST00000542001 DGKKQ5KSL6 1271 aa15.8■□□□□ 0.12
VARS2-212ENST00000542001 OTUD1Q5VV17 481 aaPredicted RBP15.8■□□□□ 0.12
VARS2-212ENST00000542001 CHST9Q7L1S5 443 aa15.8■□□□□ 0.12
VARS2-212ENST00000542001 ERMP1Q7Z2K6 904 aa15.8■□□□□ 0.12
VARS2-212ENST00000542001 XAGE5Q8WWM1 108 aa15.8■□□□□ 0.12
VARS2-212ENST00000542001 GATA6Q92908 595 aa15.8■□□□□ 0.12
VARS2-212ENST00000542001 TCF25Q9BQ70 676 aa15.8■□□□□ 0.12
VARS2-212ENST00000542001 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.8■□□□□ 0.12
VARS2-212ENST00000542001 GSTO2Q9H4Y5 243 aa15.8■□□□□ 0.12
VARS2-212ENST00000542001 IMP3Q9NV31 184 aaKnown RBP15.8■□□□□ 0.12
VARS2-212ENST00000542001 H2AFY2Q9P0M6 372 aaPredicted RBP15.8■□□□□ 0.12
VARS2-212ENST00000542001 MAP10Q9P2G4 905 aa15.8■□□□□ 0.12
VARS2-212ENST00000542001 PCDHGA7Q9Y5G6 932 aa15.8■□□□□ 0.12
VARS2-212ENST00000542001 USP3Q9Y6I4 520 aa15.8■□□□□ 0.12
VARS2-212ENST00000542001 ABCA3Q99758 1704 aa15.8■□□□□ 0.12
VARS2-212ENST00000542001 ILVBLA1L0T0 632 aa15.79■□□□□ 0.12
VARS2-212ENST00000542001 VARSP26640 1264 aaKnown RBP15.79■□□□□ 0.12
VARS2-212ENST00000542001 OXTRP30559 389 aa15.79■□□□□ 0.12
VARS2-212ENST00000542001 HPCAL1P37235 193 aa15.79■□□□□ 0.12
VARS2-212ENST00000542001 SKIV2LQ15477 1246 aaKnown RBP15.79■□□□□ 0.12
VARS2-212ENST00000542001 CLP1Q92989 425 aaKnown RBP15.79■□□□□ 0.12
VARS2-212ENST00000542001 PSKH2Q96QS6 385 aa15.79■□□□□ 0.12
VARS2-212ENST00000542001 SELENONQ9NZV5 590 aa15.79■□□□□ 0.12
VARS2-212ENST00000542001 CROCCQ5TZA2 2017 aa15.79■□□□□ 0.12
VARS2-212ENST00000542001 INPPL1O15357 1258 aa15.79■□□□□ 0.12
VARS2-212ENST00000542001 PGRP06401 933 aa15.79■□□□□ 0.12
VARS2-212ENST00000542001 PCBP2Q15366 365 aaKnown RBP eCLIP15.79■□□□□ 0.126e-9■■■■■ 34.9
VARS2-212ENST00000542001 APCDD1Q8J025 514 aa15.79■□□□□ 0.12
VARS2-212ENST00000542001 LILRA2Q8N149 483 aa15.79■□□□□ 0.12
VARS2-212ENST00000542001 AHI1Q8N157 1196 aa15.79■□□□□ 0.12
VARS2-212ENST00000542001 CLIP4Q8N3C7 705 aa15.79■□□□□ 0.12
VARS2-212ENST00000542001 SUSD6Q92537 303 aa15.79■□□□□ 0.12
VARS2-212ENST00000542001 PTTG2Q9NZH5 202 aa15.79■□□□□ 0.12
VARS2-212ENST00000542001 A0A1W2PQ45 241 aaPredicted RBP15.79■□□□□ 0.12
VARS2-212ENST00000542001 A0A1W2PQY0 241 aa15.79■□□□□ 0.12
VARS2-212ENST00000542001 SMAD6O43541 496 aaKnown RBP15.79■□□□□ 0.12
VARS2-212ENST00000542001 OR10H3O60404 316 aa15.79■□□□□ 0.12
VARS2-212ENST00000542001 PTNP21246 168 aa15.79■□□□□ 0.12
VARS2-212ENST00000542001 CDH12P55289 794 aa15.79■□□□□ 0.12
VARS2-212ENST00000542001 GANABQ14697 944 aaKnown RBP15.79■□□□□ 0.12
VARS2-212ENST00000542001 EGFLAMQ63HQ2 1017 aa15.79■□□□□ 0.12
VARS2-212ENST00000542001 HMGN2P46Q86SG4 172 aa15.79■□□□□ 0.12
VARS2-212ENST00000542001 FAM110BQ8TC76 370 aa15.79■□□□□ 0.12
VARS2-212ENST00000542001 PLGRKTQ9HBL7 147 aa15.79■□□□□ 0.12
VARS2-212ENST00000542001 GRK3P35626 688 aa15.79■□□□□ 0.12
VARS2-212ENST00000542001 TRAF3Q13114 568 aa15.79■□□□□ 0.12
VARS2-212ENST00000542001 INO80DQ53TQ3 878 aaPredicted RBP15.79■□□□□ 0.12
VARS2-212ENST00000542001 OR52E8Q6IFG1 317 aa15.79■□□□□ 0.12
VARS2-212ENST00000542001 KDELC1Q6UW63 502 aa15.79■□□□□ 0.12
VARS2-212ENST00000542001 SUSD1Q6UWL2 747 aa15.79■□□□□ 0.12
VARS2-212ENST00000542001 CHPFQ8IZ52 775 aa15.79■□□□□ 0.12
VARS2-212ENST00000542001 ADGRG2Q8IZP9 1017 aa15.79■□□□□ 0.12
VARS2-212ENST00000542001 EXOSC8Q96B26 276 aaKnown RBP15.79■□□□□ 0.12
VARS2-212ENST00000542001 TDRD1Q9BXT4 1180 aaKnown RBP15.79■□□□□ 0.12
VARS2-212ENST00000542001 SMOXQ9NWM0 555 aa15.79■□□□□ 0.12
VARS2-212ENST00000542001 LYVE1Q9Y5Y7 322 aa15.79■□□□□ 0.12
VARS2-212ENST00000542001 WNT6Q9Y6F9 365 aa15.79■□□□□ 0.12
VARS2-212ENST00000542001 STC2O76061 302 aa15.78■□□□□ 0.12
VARS2-212ENST00000542001 IL6P05231 212 aa15.78■□□□□ 0.12
VARS2-212ENST00000542001 ZXDBP98169 803 aa15.78■□□□□ 0.12
VARS2-212ENST00000542001 RFTN2Q52LD8 501 aaPredicted RBP15.78■□□□□ 0.12
VARS2-212ENST00000542001 ARSIQ5FYB1 569 aa15.78■□□□□ 0.12
VARS2-212ENST00000542001 TNFAIP8L2Q6P589 184 aaPredicted RBP15.78■□□□□ 0.12
VARS2-212ENST00000542001 FAM171BQ6P995 826 aa15.78■□□□□ 0.12
VARS2-212ENST00000542001 BBS7Q8IWZ6 715 aa15.78■□□□□ 0.12
VARS2-212ENST00000542001 CMTR2Q8IYT2 770 aaKnown RBP15.78■□□□□ 0.12
VARS2-212ENST00000542001 KAT2AQ92830 837 aa15.78■□□□□ 0.12
VARS2-212ENST00000542001 NODALQ96S42 347 aa15.78■□□□□ 0.12
VARS2-212ENST00000542001 MCMBPQ9BTE3 642 aa15.78■□□□□ 0.12
VARS2-212ENST00000542001 NUAK2Q9H093 628 aa15.78■□□□□ 0.12
VARS2-212ENST00000542001 ACTR3BQ9P1U1 418 aa15.78■□□□□ 0.12
VARS2-212ENST00000542001 PDE10AQ9Y233 779 aa15.78■□□□□ 0.12
VARS2-212ENST00000542001 TMEM88BA6NKF7 163 aa15.78■□□□□ 0.12
VARS2-212ENST00000542001 ADH1AP07327 375 aa15.78■□□□□ 0.12
VARS2-212ENST00000542001 SLC6A2P23975 617 aa15.78■□□□□ 0.12
VARS2-212ENST00000542001 SLC6A4P31645 630 aa15.78■□□□□ 0.12
VARS2-212ENST00000542001 HSF5Q4G112 596 aaPredicted RBP15.78■□□□□ 0.12
VARS2-212ENST00000542001 MPPE1Q53F39 396 aa15.78■□□□□ 0.12
VARS2-212ENST00000542001 MFSD6LQ8IWD5 586 aa15.78■□□□□ 0.12
VARS2-212ENST00000542001 POC5Q8NA72 575 aa15.78■□□□□ 0.12
VARS2-212ENST00000542001 SMYD1Q8NB12 490 aa15.78■□□□□ 0.12
VARS2-212ENST00000542001 OR4K1Q8NGD4 311 aa15.78■□□□□ 0.12
VARS2-212ENST00000542001 C12orf43Q96C57 262 aaKnown RBP15.78■□□□□ 0.12
VARS2-212ENST00000542001 RIOK2Q9BVS4 552 aaKnown RBP15.78■□□□□ 0.12
VARS2-212ENST00000542001 TRNAU1APQ9NX07 287 aaKnown RBP15.78■□□□□ 0.12
VARS2-212ENST00000542001 DOCK5Q9H7D0 1870 aa15.78■□□□□ 0.12
VARS2-212ENST00000542001 A0A1B0GTW7 788 aa15.78■□□□□ 0.12
VARS2-212ENST00000542001 PER2O15055 1255 aa15.78■□□□□ 0.12
VARS2-212ENST00000542001 MFN2O95140 757 aa15.78■□□□□ 0.12
VARS2-212ENST00000542001 SEMA3AQ14563 771 aa15.78■□□□□ 0.12
VARS2-212ENST00000542001 TMC5Q6UXY8 1006 aa15.78■□□□□ 0.12
VARS2-212ENST00000542001 RGL4Q8IZJ4 473 aa15.78■□□□□ 0.12
VARS2-212ENST00000542001 PROX1Q92786 737 aa15.78■□□□□ 0.12
VARS2-212ENST00000542001 MARCH7Q9H992 704 aa15.78■□□□□ 0.12
VARS2-212ENST00000542001 UBAP1Q9NZ09 502 aa15.78■□□□□ 0.12
VARS2-212ENST00000542001 RBM47A0AV96 593 aaKnown RBP15.77■□□□□ 0.12
VARS2-212ENST00000542001 AQP12BA6NM10 295 aa15.77■□□□□ 0.12
VARS2-212ENST00000542001 TNNI3P19429 210 aa15.77■□□□□ 0.12
VARS2-212ENST00000542001 AZGP1P25311 298 aaKnown RBP15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms