RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 CPNE9Q8IYJ1 553 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 MCOLN2Q8IZK6 566 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 ABRAQ8N0Z2 381 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 CBARPQ8N350 705 aaPredicted RBP5.11□□□□□ -1.59
SNHG1-218ENST00000541615 DHRSXQ8N5I4 330 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 CNTD1Q8N815 330 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 MFSD9Q8NBP5 474 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 NAXEQ8NCW5 288 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 CHDHQ8NE62 594 aaPredicted RBP5.11□□□□□ -1.59
SNHG1-218ENST00000541615 BPIFB6Q8NFQ5 453 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 OR4M2Q8NGB6 313 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 OR6M1Q8NGM8 313 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 MCFD2Q8NI22 146 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 WDR36Q8NI36 951 aaKnown RBP5.11□□□□□ -1.59
SNHG1-218ENST00000541615 TCTEX1D2Q8WW35 142 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 HTR3CQ8WXA8 447 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 MAFIPQ8WZ33 124 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 USP7Q93009 1102 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 CD101Q93033 1021 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 RAB24Q969Q5 203 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 MUL1Q969V5 352 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 S100PBPQ96BU1 408 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 POM121Q96HA1 1249 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 ZBED3Q96IU2 234 aaPredicted RBP5.11□□□□□ -1.59
SNHG1-218ENST00000541615 SERAC1Q96JX3 654 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 CLPTM1LQ96KA5 538 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 ZNF512Q96ME7 567 aaPredicted RBP5.11□□□□□ -1.59
SNHG1-218ENST00000541615 TCEANC2Q96MN5 208 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 Q96MT0 163 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 CDK15Q96Q40 435 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 CRAMP1Q96RY5 1269 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 TXN2Q99757 166 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 PKP2Q99959 881 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 VRK1Q99986 396 aaPredicted RBP5.11□□□□□ -1.59
SNHG1-218ENST00000541615 TINF2Q9BSI4 451 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 INPP5KQ9BT40 448 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 MENTQ9BUN1 341 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 ADI1Q9BV57 179 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 TTLL2Q9BWV7 592 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 NT5C1AQ9BXI3 368 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 KLF16Q9BXK1 252 aaPredicted RBP5.11□□□□□ -1.59
SNHG1-218ENST00000541615 ZNF436Q9C0F3 470 aaPredicted RBP5.11□□□□□ -1.59
SNHG1-218ENST00000541615 GPR88Q9GZN0 384 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 HDHD2Q9H0R4 259 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 UPF3AQ9H1J1 476 aaKnown RBP5.11□□□□□ -1.59
SNHG1-218ENST00000541615 OPN3Q9H1Y3 402 aaPredicted RBP5.11□□□□□ -1.59
SNHG1-218ENST00000541615 GAL3ST2Q9H3Q3 398 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 KAT8Q9H7Z6 458 aaKnown RBP5.11□□□□□ -1.59
SNHG1-218ENST00000541615 GLOD4Q9HC38 313 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 VAT1LQ9HCJ6 419 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 TCF7L1Q9HCS4 588 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 PRM3Q9NNZ6 103 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 ASCL3Q9NQ33 180 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 NANSQ9NR45 359 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 C1orf112Q9NSG2 853 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 BLOC1S4Q9NUP1 217 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 NINJ2Q9NZG7 142 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 MYEF2Q9P2K5 600 aaKnown RBP5.11□□□□□ -1.59
SNHG1-218ENST00000541615 SEC14L4Q9UDX3 406 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 ZNF639Q9UID6 485 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 SARDHQ9UL12 918 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 CA5BQ9Y2D0 317 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 ZNF330Q9Y3S2 320 aaPredicted RBP5.11□□□□□ -1.59
SNHG1-218ENST00000541615 HSPB11Q9Y547 144 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 PCDHGA9Q9Y5G4 932 aaKnown RBP5.11□□□□□ -1.59
SNHG1-218ENST00000541615 CSADQ9Y600 493 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 ALG5Q9Y673 324 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 CDY1Q9Y6F8 540 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 DGKBQ9Y6T7 804 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 IGSF1Q8N6C5 1336 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 COL15A1P39059 1388 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 UNC13BO14795 1591 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 A0A1B0GUL6 1792 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 MYH6P13533 1939 aa5.11□□□□□ -1.59
SNHG1-218ENST00000541615 A0A0B4J293 547 aa5.1□□□□□ -1.59
SNHG1-218ENST00000541615 C7orf72A4D263 438 aa5.1□□□□□ -1.59
SNHG1-218ENST00000541615 CLDN24A6NM45 220 aa5.1□□□□□ -1.59
SNHG1-218ENST00000541615 ARHGEF33A8MVX0 844 aa5.1□□□□□ -1.59
SNHG1-218ENST00000541615 A8MXK9 166 aa5.1□□□□□ -1.59
SNHG1-218ENST00000541615 E7ENX8 843 aa5.1□□□□□ -1.59
SNHG1-218ENST00000541615 TMEM189-UBE2V1I3L0A0 370 aa5.1□□□□□ -1.59
SNHG1-218ENST00000541615 PDHXO00330 501 aa5.1□□□□□ -1.59
SNHG1-218ENST00000541615 SLC28A1O00337 649 aa5.1□□□□□ -1.59
SNHG1-218ENST00000541615 COPEO14579 308 aa5.1□□□□□ -1.59
SNHG1-218ENST00000541615 NCANO14594 1321 aa5.1□□□□□ -1.59
SNHG1-218ENST00000541615 SCAMP3O14828 347 aaKnown RBP5.1□□□□□ -1.59
SNHG1-218ENST00000541615 PGRMC2O15173 223 aa5.1□□□□□ -1.59
SNHG1-218ENST00000541615 TOX3O15405 576 aaPredicted RBP5.1□□□□□ -1.59
SNHG1-218ENST00000541615 HSPA12AO43301 675 aa5.1□□□□□ -1.59
SNHG1-218ENST00000541615 VEGFDO43915 354 aa5.1□□□□□ -1.59
SNHG1-218ENST00000541615 PLIN3O60664 434 aa5.1□□□□□ -1.59
SNHG1-218ENST00000541615 SLIT3O75094 1523 aa5.1□□□□□ -1.59
SNHG1-218ENST00000541615 VPS4BO75351 444 aa5.1□□□□□ -1.59
SNHG1-218ENST00000541615 SUPT7LO94864 414 aa5.1□□□□□ -1.59
SNHG1-218ENST00000541615 ABCA8O94911 1581 aa5.1□□□□□ -1.59
SNHG1-218ENST00000541615 PEX11BO96011 259 aa5.1□□□□□ -1.59
SNHG1-218ENST00000541615 LALBAP00709 142 aa5.1□□□□□ -1.59
SNHG1-218ENST00000541615 DNTTP04053 509 aa5.1□□□□□ -1.59
SNHG1-218ENST00000541615 GP1BAP07359 652 aa5.1□□□□□ -1.59
SNHG1-218ENST00000541615 TMEM253P0C7T8 217 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms