RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 CFAP206Q8IYR0 622 aa11.98□□□□□ -0.49
AP003559.1-201ENST00000540906 SLC22A15Q8IZD6 547 aa11.98□□□□□ -0.49
AP003559.1-201ENST00000540906 RPLP0P6Q8NHW5 317 aa11.98□□□□□ -0.49
AP003559.1-201ENST00000540906 GANCQ8TET4 914 aa11.98□□□□□ -0.49
AP003559.1-201ENST00000540906 GLMNQ92990 594 aa11.98□□□□□ -0.49
AP003559.1-201ENST00000540906 NRTNQ99748 197 aa11.98□□□□□ -0.49
AP003559.1-201ENST00000540906 NUSAP1Q9BXS6 441 aaKnown RBP11.98□□□□□ -0.49
AP003559.1-201ENST00000540906 ATG10Q9H0Y0 220 aa11.98□□□□□ -0.49
AP003559.1-201ENST00000540906 DENND2DQ9H6A0 471 aaPredicted RBP11.98□□□□□ -0.49
AP003559.1-201ENST00000540906 FZD3Q9NPG1 666 aa11.98□□□□□ -0.49
AP003559.1-201ENST00000540906 FARSBQ9NSD9 589 aaKnown RBP11.98□□□□□ -0.49
AP003559.1-201ENST00000540906 OPTCQ9UBM4 332 aa11.98□□□□□ -0.49
AP003559.1-201ENST00000540906 A0A1W2PQU0 124 aa11.97□□□□□ -0.49
AP003559.1-201ENST00000540906 LOC730098B7Z3J9 87 aa11.97□□□□□ -0.49
AP003559.1-201ENST00000540906 FFAR3O14843 346 aa11.97□□□□□ -0.49
AP003559.1-201ENST00000540906 KPNA5O15131 536 aa11.97□□□□□ -0.49
AP003559.1-201ENST00000540906 GPR42O15529 346 aa11.97□□□□□ -0.49
AP003559.1-201ENST00000540906 PLRG1O43660 514 aaKnown RBP11.97□□□□□ -0.49
AP003559.1-201ENST00000540906 STK16O75716 305 aa11.97□□□□□ -0.49
AP003559.1-201ENST00000540906 PRR35P0CG20 571 aa11.97□□□□□ -0.49
AP003559.1-201ENST00000540906 ITPKAP23677 461 aa11.97□□□□□ -0.49
AP003559.1-201ENST00000540906 MAT2AP31153 395 aaKnown RBP11.97□□□□□ -0.49
AP003559.1-201ENST00000540906 GGT5P36269 586 aa11.97□□□□□ -0.49
AP003559.1-201ENST00000540906 ARL1P40616 181 aaPredicted RBP11.97□□□□□ -0.49
AP003559.1-201ENST00000540906 MXRA7P84157 204 aa11.97□□□□□ -0.49
AP003559.1-201ENST00000540906 CDKL1Q00532 357 aa11.97□□□□□ -0.49
AP003559.1-201ENST00000540906 INPP5AQ14642 412 aa11.97□□□□□ -0.49
AP003559.1-201ENST00000540906 PTCHD3Q3KNS1 767 aa11.97□□□□□ -0.49
AP003559.1-201ENST00000540906 TMEM259Q4ZIN3 620 aa11.97□□□□□ -0.49
AP003559.1-201ENST00000540906 Q6ZSR9 355 aa11.97□□□□□ -0.49
AP003559.1-201ENST00000540906 FUNDC1Q8IVP5 155 aa11.97□□□□□ -0.49
AP003559.1-201ENST00000540906 SFRP1Q8N474 314 aa11.97□□□□□ -0.49
AP003559.1-201ENST00000540906 SPDYE1Q8NFV5 336 aaPredicted RBP11.97□□□□□ -0.49
AP003559.1-201ENST00000540906 OR14C36Q8NHC7 312 aa11.97□□□□□ -0.49
AP003559.1-201ENST00000540906 WDR60Q8WVS4 1066 aa11.97□□□□□ -0.49
AP003559.1-201ENST00000540906 TMEM159Q96B96 161 aa11.97□□□□□ -0.49
AP003559.1-201ENST00000540906 TUBGCP3Q96CW5 907 aa11.97□□□□□ -0.49
AP003559.1-201ENST00000540906 RCN3Q96D15 328 aa11.97□□□□□ -0.49
AP003559.1-201ENST00000540906 MYOCQ99972 504 aa11.97□□□□□ -0.49
AP003559.1-201ENST00000540906 RASSF4Q9H2L5 321 aa11.97□□□□□ -0.49
AP003559.1-201ENST00000540906 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.97□□□□□ -0.49
AP003559.1-201ENST00000540906 PACSIN3Q9UKS6 424 aa11.97□□□□□ -0.49
AP003559.1-201ENST00000540906 A0A088AWK7 358 aa11.97□□□□□ -0.49
AP003559.1-201ENST00000540906 SLC16A5O15375 505 aa11.97□□□□□ -0.49
AP003559.1-201ENST00000540906 RNGTTO60942 597 aaKnown RBP11.97□□□□□ -0.49
AP003559.1-201ENST00000540906 PEX11AO75192 247 aa11.97□□□□□ -0.49
AP003559.1-201ENST00000540906 ATP6V1G2O95670 118 aa11.97□□□□□ -0.49
AP003559.1-201ENST00000540906 ENO2P09104 434 aaPredicted RBP11.97□□□□□ -0.49
AP003559.1-201ENST00000540906 GPX3P22352 226 aa11.97□□□□□ -0.49
AP003559.1-201ENST00000540906 IGFALSP35858 605 aa11.97□□□□□ -0.49
AP003559.1-201ENST00000540906 PGM1P36871 562 aa11.97□□□□□ -0.49
AP003559.1-201ENST00000540906 CCNG1P51959 295 aa11.97□□□□□ -0.49
AP003559.1-201ENST00000540906 DIO3P55073 304 aa11.97□□□□□ -0.49
AP003559.1-201ENST00000540906 PFN3P60673 137 aa11.97□□□□□ -0.49
AP003559.1-201ENST00000540906 GRSF1Q12849 480 aaKnown RBP eCLIP11.97□□□□□ -0.49
AP003559.1-201ENST00000540906 SP140Q13342 867 aa11.97□□□□□ -0.49
AP003559.1-201ENST00000540906 SQLEQ14534 574 aa11.97□□□□□ -0.49
AP003559.1-201ENST00000540906 STARD3Q14849 445 aa11.97□□□□□ -0.49
AP003559.1-201ENST00000540906 ABRAXAS2Q15018 415 aa11.97□□□□□ -0.49
AP003559.1-201ENST00000540906 Q6ZS52 159 aa11.97□□□□□ -0.49
AP003559.1-201ENST00000540906 MILR1Q7Z6M3 343 aa11.97□□□□□ -0.49
AP003559.1-201ENST00000540906 PARP9Q8IXQ6 854 aa11.97□□□□□ -0.49
AP003559.1-201ENST00000540906 PPFIBP2Q8ND30 876 aa11.97□□□□□ -0.49
AP003559.1-201ENST00000540906 METTL6Q8TCB7 284 aa11.97□□□□□ -0.49
AP003559.1-201ENST00000540906 NUDT8Q8WV74 236 aa11.97□□□□□ -0.49
AP003559.1-201ENST00000540906 CMTM5Q96DZ9 223 aa11.97□□□□□ -0.49
AP003559.1-201ENST00000540906 RAB3IPQ96QF0 476 aaPredicted RBP11.97□□□□□ -0.49
AP003559.1-201ENST00000540906 PKP4Q99569 1192 aa11.97□□□□□ -0.49
AP003559.1-201ENST00000540906 NPAS2Q99743 824 aa11.97□□□□□ -0.49
AP003559.1-201ENST00000540906 THTPAQ9BU02 230 aa11.97□□□□□ -0.49
AP003559.1-201ENST00000540906 C1orf50Q9BV19 199 aa11.97□□□□□ -0.49
AP003559.1-201ENST00000540906 C1QTNF2Q9BXJ5 285 aa11.97□□□□□ -0.49
AP003559.1-201ENST00000540906 EPHX3Q9H6B9 360 aa11.97□□□□□ -0.49
AP003559.1-201ENST00000540906 C8orf33Q9H7E9 229 aaPredicted RBP11.97□□□□□ -0.49
AP003559.1-201ENST00000540906 C2orf42Q9NWW7 574 aa11.97□□□□□ -0.49
AP003559.1-201ENST00000540906 CCL27Q9Y4X3 112 aa11.97□□□□□ -0.49
AP003559.1-201ENST00000540906 KCNE1BA0A087WTH5 132 aa11.96□□□□□ -0.49
AP003559.1-201ENST00000540906 QSOX1O00391 747 aa11.96□□□□□ -0.49
AP003559.1-201ENST00000540906 FBP2O00757 339 aa11.96□□□□□ -0.49
AP003559.1-201ENST00000540906 AIM2O14862 343 aa11.96□□□□□ -0.49
AP003559.1-201ENST00000540906 WDR47O94967 919 aa11.96□□□□□ -0.49
AP003559.1-201ENST00000540906 DNTTP04053 509 aa11.96□□□□□ -0.49
AP003559.1-201ENST00000540906 HGFP14210 728 aa11.96□□□□□ -0.49
AP003559.1-201ENST00000540906 NDUFV2P19404 249 aa11.96□□□□□ -0.49
AP003559.1-201ENST00000540906 CYP2A7P20853 494 aa11.96□□□□□ -0.49
AP003559.1-201ENST00000540906 DRD1P21728 446 aa11.96□□□□□ -0.49
AP003559.1-201ENST00000540906 DPP6P42658 865 aa11.96□□□□□ -0.49
AP003559.1-201ENST00000540906 CCINQ13939 588 aa11.96□□□□□ -0.49
AP003559.1-201ENST00000540906 AGERQ15109 404 aa11.96□□□□□ -0.49
AP003559.1-201ENST00000540906 AGKQ53H12 422 aa11.96□□□□□ -0.49
AP003559.1-201ENST00000540906 IL27RAQ6UWB1 636 aa11.96□□□□□ -0.49
AP003559.1-201ENST00000540906 DNASE1L2Q92874 299 aa11.96□□□□□ -0.49
AP003559.1-201ENST00000540906 ATP6V1E2Q96A05 226 aa11.96□□□□□ -0.49
AP003559.1-201ENST00000540906 MRGPRX1Q96LB2 322 aa11.96□□□□□ -0.49
AP003559.1-201ENST00000540906 LINC00615Q96LM1 132 aaPredicted RBP11.96□□□□□ -0.49
AP003559.1-201ENST00000540906 PHF7Q9BWX1 381 aaPredicted RBP11.96□□□□□ -0.49
AP003559.1-201ENST00000540906 TEX101Q9BY14 249 aa11.96□□□□□ -0.49
AP003559.1-201ENST00000540906 CAAP1Q9H8G2 361 aa11.96□□□□□ -0.49
AP003559.1-201ENST00000540906 STOX2Q9P2F5 926 aaPredicted RBP11.96□□□□□ -0.49
AP003559.1-201ENST00000540906 ZNHIT2Q9UHR6 403 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms