RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 TSPAN8P19075 237 aa5.15□□□□□ -1.59
PROM1-220ENST00000540805 POLR2EP19388 210 aaKnown RBP5.15□□□□□ -1.59
PROM1-220ENST00000540805 TNNI3P19429 210 aa5.15□□□□□ -1.59
PROM1-220ENST00000540805 RABGGTBP53611 331 aa5.15□□□□□ -1.59
PROM1-220ENST00000540805 P2RX3P56373 397 aa5.15□□□□□ -1.59
PROM1-220ENST00000540805 ALDH6A1Q02252 535 aaKnown RBP5.15□□□□□ -1.59
PROM1-220ENST00000540805 LIPEQ05469 1076 aa5.15□□□□□ -1.59
PROM1-220ENST00000540805 TOP3AQ13472 1001 aaPredicted RBP5.15□□□□□ -1.59
PROM1-220ENST00000540805 CBX2Q14781 532 aaPredicted RBP5.15□□□□□ -1.59
PROM1-220ENST00000540805 UBXN11Q5T124 520 aa5.15□□□□□ -1.59
PROM1-220ENST00000540805 ARTNQ5T4W7 220 aa5.15□□□□□ -1.59
PROM1-220ENST00000540805 TTC23Q5W5X9 447 aa5.15□□□□□ -1.59
PROM1-220ENST00000540805 ZNF470Q6ECI4 717 aa5.15□□□□□ -1.59
PROM1-220ENST00000540805 NEK5Q6P3R8 708 aa5.15□□□□□ -1.59
PROM1-220ENST00000540805 CEP68Q76N32 757 aa5.15□□□□□ -1.59
PROM1-220ENST00000540805 SCML4Q8N228 414 aa5.15□□□□□ -1.59
PROM1-220ENST00000540805 C10orf53Q8N6V4 93 aa5.15□□□□□ -1.59
PROM1-220ENST00000540805 PIK3C3Q8NEB9 887 aa5.15□□□□□ -1.59
PROM1-220ENST00000540805 SLC22A17Q8WUG5 538 aa5.15□□□□□ -1.59
PROM1-220ENST00000540805 WNT8BQ93098 351 aa5.15□□□□□ -1.59
PROM1-220ENST00000540805 TMEM125Q96AQ2 219 aa5.15□□□□□ -1.59
PROM1-220ENST00000540805 TUBGCP3Q96CW5 907 aa5.15□□□□□ -1.59
PROM1-220ENST00000540805 MED8Q96G25 268 aa5.15□□□□□ -1.59
PROM1-220ENST00000540805 BTN2A3PQ96KV6 586 aa5.15□□□□□ -1.59
PROM1-220ENST00000540805 C3orf30Q96M34 536 aa5.15□□□□□ -1.59
PROM1-220ENST00000540805 VAT1Q99536 393 aa5.15□□□□□ -1.59
PROM1-220ENST00000540805 C2orf49Q9BVC5 232 aaPredicted RBP5.15□□□□□ -1.59
PROM1-220ENST00000540805 CHID1Q9BWS9 393 aa5.15□□□□□ -1.59
PROM1-220ENST00000540805 NARFLQ9H6Q4 476 aa5.15□□□□□ -1.59
PROM1-220ENST00000540805 AKTIPQ9H8T0 292 aa5.15□□□□□ -1.59
PROM1-220ENST00000540805 ACTR8Q9H981 624 aa5.15□□□□□ -1.59
PROM1-220ENST00000540805 MOV10Q9HCE1 1003 aaKnown RBP5.15□□□□□ -1.59
PROM1-220ENST00000540805 ABCB10Q9NRK6 738 aa5.15□□□□□ -1.59
PROM1-220ENST00000540805 GDAP2Q9NXN4 497 aa5.15□□□□□ -1.59
PROM1-220ENST00000540805 MAT2BQ9NZL9 334 aa5.15□□□□□ -1.59
PROM1-220ENST00000540805 OR12D3Q9UGF7 316 aa5.15□□□□□ -1.59
PROM1-220ENST00000540805 FAM50BQ9Y247 325 aa5.15□□□□□ -1.59
PROM1-220ENST00000540805 CRYL1Q9Y2S2 319 aa5.15□□□□□ -1.59
PROM1-220ENST00000540805 PCDHA9Q9Y5H5 950 aa5.15□□□□□ -1.59
PROM1-220ENST00000540805 CABIN1Q9Y6J0 2220 aa5.14□□□□□ -1.59
PROM1-220ENST00000540805 GNG14A0A1W2PPG7 69 aa5.14□□□□□ -1.59
PROM1-220ENST00000540805 MYADML2A6NDP7 307 aa5.14□□□□□ -1.59
PROM1-220ENST00000540805 UBXN8O00124 270 aa5.14□□□□□ -1.59
PROM1-220ENST00000540805 SLC22A1O15245 554 aa5.14□□□□□ -1.59
PROM1-220ENST00000540805 CCL16O15467 120 aa5.14□□□□□ -1.59
PROM1-220ENST00000540805 TPPPO94811 219 aa5.14□□□□□ -1.59
PROM1-220ENST00000540805 NADKO95544 446 aaPredicted RBP5.14□□□□□ -1.59
PROM1-220ENST00000540805 DBTP11182 482 aaKnown RBP5.14□□□□□ -1.59
PROM1-220ENST00000540805 BMP4P12644 408 aa5.14□□□□□ -1.59
PROM1-220ENST00000540805 HLA-DPA1P20036 260 aa5.14□□□□□ -1.59
PROM1-220ENST00000540805 GEMP55040 296 aa5.14□□□□□ -1.59
PROM1-220ENST00000540805 NKX3-2P78367 333 aa5.14□□□□□ -1.59
PROM1-220ENST00000540805 ILF2Q12905 390 aaKnown RBP5.14□□□□□ -1.59
PROM1-220ENST00000540805 MADCAM1Q13477 382 aa5.14□□□□□ -1.59
PROM1-220ENST00000540805 IRF5Q13568 498 aa5.14□□□□□ -1.59
PROM1-220ENST00000540805 COQ5Q5HYK3 327 aa5.14□□□□□ -1.59
PROM1-220ENST00000540805 ATAT1Q5SQI0 421 aa5.14□□□□□ -1.59
PROM1-220ENST00000540805 PTRH1Q86Y79 214 aaKnown RBP5.14□□□□□ -1.59
PROM1-220ENST00000540805 ARMC8Q8IUR7 673 aa5.14□□□□□ -1.59
PROM1-220ENST00000540805 CLYBLQ8N0X4 340 aa5.14□□□□□ -1.59
PROM1-220ENST00000540805 MFSD4AQ8N468 514 aa5.14□□□□□ -1.59
PROM1-220ENST00000540805 CELF2-AS1Q8N7Q2 184 aa5.14□□□□□ -1.59
PROM1-220ENST00000540805 SMG8Q8ND04 991 aaKnown RBP5.14□□□□□ -1.59
PROM1-220ENST00000540805 ZNF555Q8NEP9 628 aa5.14□□□□□ -1.59
PROM1-220ENST00000540805 DNAJB14Q8TBM8 379 aa5.14□□□□□ -1.59
PROM1-220ENST00000540805 TRIB2Q92519 343 aa5.14□□□□□ -1.59
PROM1-220ENST00000540805 GLMNQ92990 594 aa5.14□□□□□ -1.59
PROM1-220ENST00000540805 BIRC7Q96CA5 298 aa5.14□□□□□ -1.59
PROM1-220ENST00000540805 VPS35Q96QK1 796 aa5.14□□□□□ -1.59
PROM1-220ENST00000540805 TBL1YQ9BQ87 522 aa5.14□□□□□ -1.59
PROM1-220ENST00000540805 BCL7BQ9BQE9 202 aa5.14□□□□□ -1.59
PROM1-220ENST00000540805 LPIN3Q9BQK8 851 aa5.14□□□□□ -1.59
PROM1-220ENST00000540805 PIF1Q9H611 641 aa5.14□□□□□ -1.59
PROM1-220ENST00000540805 MPP6Q9NZW5 540 aa5.14□□□□□ -1.59
PROM1-220ENST00000540805 MAGED1Q9Y5V3 778 aaPredicted RBP5.14□□□□□ -1.59
PROM1-220ENST00000540805 PMF1-BGLAPU3KQ54 211 aa5.14□□□□□ -1.59
PROM1-220ENST00000540805 CHD9Q3L8U1 2897 aa5.14□□□□□ -1.59
PROM1-220ENST00000540805 UNC80Q8N2C7 3258 aa5.14□□□□□ -1.59
PROM1-220ENST00000540805 A0A0G2JMP0 313 aa5.14□□□□□ -1.59
PROM1-220ENST00000540805 ZNF99A8MXY4 864 aaPredicted RBP5.14□□□□□ -1.59
PROM1-220ENST00000540805 TTC34A8MYJ7 566 aa5.14□□□□□ -1.59
PROM1-220ENST00000540805 MYO1GB0I1T2 1018 aa5.14□□□□□ -1.59
PROM1-220ENST00000540805 LINC01387J3KSC0 135 aa5.14□□□□□ -1.59
PROM1-220ENST00000540805 ASNA1O43681 348 aa5.14□□□□□ -1.59
PROM1-220ENST00000540805 NUAK1O60285 661 aa5.14□□□□□ -1.59
PROM1-220ENST00000540805 SOAT2O75908 522 aa5.14□□□□□ -1.59
PROM1-220ENST00000540805 MATN4O95460 622 aa5.14□□□□□ -1.59
PROM1-220ENST00000540805 NTRK1P04629 796 aa5.14□□□□□ -1.59
PROM1-220ENST00000540805 CAPN1P07384 714 aa5.14□□□□□ -1.59
PROM1-220ENST00000540805 ICAM2P13598 275 aa5.14□□□□□ -1.59
PROM1-220ENST00000540805 GJA1P17302 382 aa5.14□□□□□ -1.59
PROM1-220ENST00000540805 ITIH1P19827 911 aa5.14□□□□□ -1.59
PROM1-220ENST00000540805 RPL34P49207 117 aaKnown RBP5.14□□□□□ -1.59
PROM1-220ENST00000540805 SLC16A1P53985 500 aa5.14□□□□□ -1.59
PROM1-220ENST00000540805 EEFSECP57772 596 aaKnown RBP5.14□□□□□ -1.59
PROM1-220ENST00000540805 KCNK10P57789 538 aa5.14□□□□□ -1.59
PROM1-220ENST00000540805 PITX1P78337 314 aaPredicted RBP5.14□□□□□ -1.59
PROM1-220ENST00000540805 DAB2P98082 770 aa5.14□□□□□ -1.59
PROM1-220ENST00000540805 BCL2L1Q07817 233 aa5.14□□□□□ -1.59
PROM1-220ENST00000540805 EPS8Q12929 822 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms