RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 RHBDF1Q96CC6 855 aa13.93□□□□□ -0.18
CYB561A3-216ENST00000540755 FAR2Q96K12 515 aa13.93□□□□□ -0.18
CYB561A3-216ENST00000540755 HIST1H2AHQ96KK5 128 aa13.93□□□□□ -0.18
CYB561A3-216ENST00000540755 HIST1H2AJQ99878 128 aa13.93□□□□□ -0.18
CYB561A3-216ENST00000540755 H2AFJQ9BTM1 129 aa13.93□□□□□ -0.18
CYB561A3-216ENST00000540755 APOOQ9BUR5 198 aa13.93□□□□□ -0.18
CYB561A3-216ENST00000540755 DPEP2Q9H4A9 486 aa13.93□□□□□ -0.18
CYB561A3-216ENST00000540755 DLL3Q9NYJ7 618 aa13.93□□□□□ -0.18
CYB561A3-216ENST00000540755 PCTPQ9UKL6 214 aa13.93□□□□□ -0.18
CYB561A3-216ENST00000540755 PABPN1LA6NDY0 278 aaKnown RBP13.92□□□□□ -0.18
CYB561A3-216ENST00000540755 LRRC14BA6NHZ5 514 aa13.92□□□□□ -0.18
CYB561A3-216ENST00000540755 H3BM21 787 aa13.92□□□□□ -0.18
CYB561A3-216ENST00000540755 CACNB4O00305 520 aaPredicted RBP13.92□□□□□ -0.18
CYB561A3-216ENST00000540755 E2F3O00716 465 aa13.92□□□□□ -0.18
CYB561A3-216ENST00000540755 UBFD1O14562 309 aaKnown RBP13.92□□□□□ -0.18
CYB561A3-216ENST00000540755 FPGTO14772 594 aa13.92□□□□□ -0.18
CYB561A3-216ENST00000540755 KMOO15229 486 aa13.92□□□□□ -0.18
CYB561A3-216ENST00000540755 HDAC3O15379 428 aa13.92□□□□□ -0.18
CYB561A3-216ENST00000540755 ZNF217O75362 1048 aa13.92□□□□□ -0.18
CYB561A3-216ENST00000540755 MLYCDO95822 493 aa13.92□□□□□ -0.18
CYB561A3-216ENST00000540755 TGM1P22735 817 aa13.92□□□□□ -0.18
CYB561A3-216ENST00000540755 PREPP48147 710 aa13.92□□□□□ -0.18
CYB561A3-216ENST00000540755 AGTR2P50052 363 aa13.92□□□□□ -0.18
CYB561A3-216ENST00000540755 CCR5P51681 352 aa13.92□□□□□ -0.18
CYB561A3-216ENST00000540755 CDH13P55290 713 aa13.92□□□□□ -0.18
CYB561A3-216ENST00000540755 CORO7P57737 925 aa13.92□□□□□ -0.18
CYB561A3-216ENST00000540755 KIAA1024LP59773 190 aa13.92□□□□□ -0.18
CYB561A3-216ENST00000540755 DMWDQ09019 674 aa13.92□□□□□ -0.18
CYB561A3-216ENST00000540755 LCP2Q13094 533 aa13.92□□□□□ -0.18
CYB561A3-216ENST00000540755 RPA4Q13156 261 aa13.92□□□□□ -0.18
CYB561A3-216ENST00000540755 SH2D4BQ5SQS7 431 aa13.92□□□□□ -0.18
CYB561A3-216ENST00000540755 TTC23LQ6PF05 361 aa13.92□□□□□ -0.18
CYB561A3-216ENST00000540755 MAVSQ7Z434 540 aa13.92□□□□□ -0.18
CYB561A3-216ENST00000540755 AMZ2Q86W34 360 aa13.92□□□□□ -0.18
CYB561A3-216ENST00000540755 CFAP206Q8IYR0 622 aa13.92□□□□□ -0.18
CYB561A3-216ENST00000540755 SPEM1Q8N4L4 309 aa13.92□□□□□ -0.18
CYB561A3-216ENST00000540755 MCOLN3Q8TDD5 553 aa13.92□□□□□ -0.18
CYB561A3-216ENST00000540755 CCT6BQ92526 530 aa13.92□□□□□ -0.18
CYB561A3-216ENST00000540755 FOPNLQ96NB1 174 aa13.92□□□□□ -0.18
CYB561A3-216ENST00000540755 HHIPQ96QV1 700 aa13.92□□□□□ -0.18
CYB561A3-216ENST00000540755 EGFL8Q99944 293 aa13.92□□□□□ -0.18
CYB561A3-216ENST00000540755 FZD3Q9NPG1 666 aa13.92□□□□□ -0.18
CYB561A3-216ENST00000540755 NCDNQ9UBB6 729 aa13.92□□□□□ -0.18
CYB561A3-216ENST00000540755 FAM8A1Q9UBU6 413 aa13.92□□□□□ -0.18
CYB561A3-216ENST00000540755 CYP8B1Q9UNU6 501 aa13.92□□□□□ -0.18
CYB561A3-216ENST00000540755 APOBEC2Q9Y235 224 aaKnown RBP13.92□□□□□ -0.18
CYB561A3-216ENST00000540755 SLC17A4Q9Y2C5 497 aa13.92□□□□□ -0.18
CYB561A3-216ENST00000540755 RRP15Q9Y3B9 282 aaKnown RBP13.92□□□□□ -0.18
CYB561A3-216ENST00000540755 PCYT1BQ9Y5K3 369 aaPredicted RBP13.92□□□□□ -0.18
CYB561A3-216ENST00000540755 PLXND1Q9Y4D7 1925 aa13.91□□□□□ -0.18
CYB561A3-216ENST00000540755 EPG5Q9HCE0 2579 aa13.91□□□□□ -0.18
CYB561A3-216ENST00000540755 MED19A0JLT2 244 aaPredicted RBP13.91□□□□□ -0.18
CYB561A3-216ENST00000540755 K7ESF4 209 aa13.91□□□□□ -0.18
CYB561A3-216ENST00000540755 TOR1BO14657 336 aa13.91□□□□□ -0.18
CYB561A3-216ENST00000540755 TAPBPO15533 448 aa13.91□□□□□ -0.18
CYB561A3-216ENST00000540755 GUCA1CO95843 209 aa13.91□□□□□ -0.18
CYB561A3-216ENST00000540755 FGF4P08620 206 aa13.91□□□□□ -0.18
CYB561A3-216ENST00000540755 PDHA2P29803 388 aa13.91□□□□□ -0.18
CYB561A3-216ENST00000540755 GGT5P36269 586 aa13.91□□□□□ -0.18
CYB561A3-216ENST00000540755 HNMTP50135 292 aa13.91□□□□□ -0.18
CYB561A3-216ENST00000540755 KIAA0895LQ68EN5 471 aa13.91□□□□□ -0.18
CYB561A3-216ENST00000540755 EPGNQ6UW88 154 aa13.91□□□□□ -0.18
CYB561A3-216ENST00000540755 FBXO15Q8NCQ5 510 aaPredicted RBP13.91□□□□□ -0.18
CYB561A3-216ENST00000540755 AGR3Q8TD06 166 aa13.91□□□□□ -0.18
CYB561A3-216ENST00000540755 SKA1Q96BD8 255 aa13.91□□□□□ -0.18
CYB561A3-216ENST00000540755 TOE1Q96GM8 510 aaKnown RBP13.91□□□□□ -0.18
CYB561A3-216ENST00000540755 SCARF2Q96GP6 870 aaPredicted RBP13.91□□□□□ -0.18
CYB561A3-216ENST00000540755 NSUN5Q96P11 429 aaKnown RBP13.91□□□□□ -0.18
CYB561A3-216ENST00000540755 TMEM79Q9BSE2 394 aa13.91□□□□□ -0.18
CYB561A3-216ENST00000540755 SHCBP1LQ9BZQ2 653 aa13.91□□□□□ -0.18
CYB561A3-216ENST00000540755 PARD6AQ9NPB6 346 aa13.91□□□□□ -0.18
CYB561A3-216ENST00000540755 ABCF3Q9NUQ8 709 aa13.91□□□□□ -0.18
CYB561A3-216ENST00000540755 ARL15Q9NXU5 204 aa13.91□□□□□ -0.18
CYB561A3-216ENST00000540755 WSB2Q9NYS7 404 aaPredicted RBP13.91□□□□□ -0.18
CYB561A3-216ENST00000540755 WWOXQ9NZC7 414 aa13.91□□□□□ -0.18
CYB561A3-216ENST00000540755 EIF2B4Q9UI10 523 aaKnown RBP13.91□□□□□ -0.18
CYB561A3-216ENST00000540755 STK38LQ9Y2H1 464 aa13.91□□□□□ -0.18
CYB561A3-216ENST00000540755 ASB1Q9Y576 335 aa13.91□□□□□ -0.18
CYB561A3-216ENST00000540755 HS3ST3A1Q9Y663 406 aa13.91□□□□□ -0.18
CYB561A3-216ENST00000540755 TPRP12270 2363 aaKnown RBP13.91□□□□□ -0.18
CYB561A3-216ENST00000540755 KCNJ13O60928 360 aa13.9□□□□□ -0.18
CYB561A3-216ENST00000540755 ATP5HO75947 161 aa13.9□□□□□ -0.18
CYB561A3-216ENST00000540755 APBB3O95704 486 aa13.9□□□□□ -0.18
CYB561A3-216ENST00000540755 CATP04040 527 aaKnown RBP13.9□□□□□ -0.18
CYB561A3-216ENST00000540755 CEACAM5P06731 702 aa13.9□□□□□ -0.18
CYB561A3-216ENST00000540755 MAP4P27816 1152 aaKnown RBP13.9□□□□□ -0.18
CYB561A3-216ENST00000540755 CD6P30203 668 aa13.9□□□□□ -0.18
CYB561A3-216ENST00000540755 AKT2P31751 481 aa13.9□□□□□ -0.18
CYB561A3-216ENST00000540755 NUDT1P36639 197 aa13.9□□□□□ -0.18
CYB561A3-216ENST00000540755 IDH3AP50213 366 aa13.9□□□□□ -0.18
CYB561A3-216ENST00000540755 SH3BP2P78314 561 aa13.9□□□□□ -0.18
CYB561A3-216ENST00000540755 DMPKQ09013 629 aa13.9□□□□□ -0.18
CYB561A3-216ENST00000540755 ABRQ12979 859 aa13.9□□□□□ -0.18
CYB561A3-216ENST00000540755 NFE2L1Q14494 772 aa13.9□□□□□ -0.18
CYB561A3-216ENST00000540755 PLA2G4EQ3MJ16 856 aa13.9□□□□□ -0.18
CYB561A3-216ENST00000540755 FBXO48Q5FWF7 155 aa13.9□□□□□ -0.18
CYB561A3-216ENST00000540755 FITM2Q8N6M3 262 aa13.9□□□□□ -0.18
CYB561A3-216ENST00000540755 OR56A4Q8NGH8 313 aa13.9□□□□□ -0.18
CYB561A3-216ENST00000540755 TRPC4APQ8TEL6 797 aa13.9□□□□□ -0.18
CYB561A3-216ENST00000540755 AGAP11Q8TF27 550 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms