RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 INSM1Q01101 510 aaPredicted RBP16.3■□□□□ 0.2
UBC-208ENST00000540700 GSTM4Q03013 218 aa16.3■□□□□ 0.2
UBC-208ENST00000540700 HSPA14Q0VDF9 509 aa16.3■□□□□ 0.2
UBC-208ENST00000540700 LY6DQ14210 128 aa16.3■□□□□ 0.2
UBC-208ENST00000540700 KLHL38Q2WGJ6 581 aa16.3■□□□□ 0.2
UBC-208ENST00000540700 WASH2PQ6VEQ5 465 aa16.3■□□□□ 0.2
UBC-208ENST00000540700 CPNE9Q8IYJ1 553 aa16.3■□□□□ 0.2
UBC-208ENST00000540700 ZBTB2Q8N680 514 aa16.3■□□□□ 0.2
UBC-208ENST00000540700 FAM181AQ8N9Y4 354 aa16.3■□□□□ 0.2
UBC-208ENST00000540700 GABPB2Q8TAK5 448 aaPredicted RBP16.3■□□□□ 0.2
UBC-208ENST00000540700 PANX3Q96QZ0 392 aa16.3■□□□□ 0.2
UBC-208ENST00000540700 NRTNQ99748 197 aa16.3■□□□□ 0.2
UBC-208ENST00000540700 SEMA4CQ9C0C4 833 aa16.3■□□□□ 0.2
UBC-208ENST00000540700 CLMPQ9H6B4 373 aa16.3■□□□□ 0.2
UBC-208ENST00000540700 WASH6PQ9NQA3 447 aa16.3■□□□□ 0.2
UBC-208ENST00000540700 CORO1CQ9ULV4 474 aaPredicted RBP16.3■□□□□ 0.2
UBC-208ENST00000540700 RUVBL2Q9Y230 463 aaKnown RBP16.3■□□□□ 0.2
UBC-208ENST00000540700 DHRS7Q9Y394 339 aa16.3■□□□□ 0.2
UBC-208ENST00000540700 COMMD10Q9Y6G5 202 aa16.3■□□□□ 0.2
UBC-208ENST00000540700 COL5A1P20908 1838 aaPredicted RBP16.29■□□□□ 0.2
UBC-208ENST00000540700 ARID1BQ8NFD5 2236 aaPredicted RBP16.29■□□□□ 0.2
UBC-208ENST00000540700 EXOC1LA0A1B0GW35 172 aa16.29■□□□□ 0.2
UBC-208ENST00000540700 E5RI56 91 aa16.29■□□□□ 0.2
UBC-208ENST00000540700 LIN7AO14910 233 aaPredicted RBP16.29■□□□□ 0.2
UBC-208ENST00000540700 SLCO2B1O94956 709 aa16.29■□□□□ 0.2
UBC-208ENST00000540700 TSPAN12O95859 305 aa16.29■□□□□ 0.2
UBC-208ENST00000540700 TUBBP07437 444 aa16.29■□□□□ 0.2
UBC-208ENST00000540700 ITGA2BP08514 1039 aa16.29■□□□□ 0.2
UBC-208ENST00000540700 VCLP18206 1134 aa16.29■□□□□ 0.2
UBC-208ENST00000540700 SAT1P21673 171 aa16.29■□□□□ 0.2
UBC-208ENST00000540700 ILKQ13418 452 aa16.29■□□□□ 0.2
UBC-208ENST00000540700 RPE65Q16518 533 aa16.29■□□□□ 0.2
UBC-208ENST00000540700 BEND6Q5SZJ8 279 aaPredicted RBP16.29■□□□□ 0.2
UBC-208ENST00000540700 FAM45BPQ6NSW5 357 aa16.29■□□□□ 0.2
UBC-208ENST00000540700 ZCCHC8Q6NZY4 707 aaKnown RBP16.29■□□□□ 0.2
UBC-208ENST00000540700 PAQR3Q6TCH7 311 aa16.29■□□□□ 0.2
UBC-208ENST00000540700 OTOAQ7RTW8 1153 aa16.29■□□□□ 0.2
UBC-208ENST00000540700 CMC1Q7Z7K0 106 aa16.29■□□□□ 0.2
UBC-208ENST00000540700 SLC22A15Q8IZD6 547 aa16.29■□□□□ 0.2
UBC-208ENST00000540700 SFRP1Q8N474 314 aa16.29■□□□□ 0.2
UBC-208ENST00000540700 ARL14Q8N4G2 192 aa16.29■□□□□ 0.2
UBC-208ENST00000540700 ARL10Q8N8L6 244 aa16.29■□□□□ 0.2
UBC-208ENST00000540700 ZNF248Q8NDW4 579 aa16.29■□□□□ 0.2
UBC-208ENST00000540700 FAM45AQ8TCE6 357 aa16.29■□□□□ 0.2
UBC-208ENST00000540700 DUSP23Q9BVJ7 150 aa16.29■□□□□ 0.2
UBC-208ENST00000540700 CCDC68Q9H2F9 335 aa16.29■□□□□ 0.2
UBC-208ENST00000540700 CTNNAL1Q9UBT7 734 aa16.29■□□□□ 0.2
UBC-208ENST00000540700 IKZF3Q9UKT9 509 aa16.29■□□□□ 0.2
UBC-208ENST00000540700 ACSL5Q9ULC5 683 aa16.29■□□□□ 0.2
UBC-208ENST00000540700 NFS1Q9Y697 457 aa16.29■□□□□ 0.2
UBC-208ENST00000540700 ZFC3H1O60293 1989 aaKnown RBP16.29■□□□□ 0.2
UBC-208ENST00000540700 KLHL33A6NCF5 533 aa16.28■□□□□ 0.2
UBC-208ENST00000540700 PHGDHO43175 533 aaKnown RBP16.28■□□□□ 0.2
UBC-208ENST00000540700 MT-CO3P00414 261 aa16.28■□□□□ 0.2
UBC-208ENST00000540700 CD9P21926 228 aa16.28■□□□□ 0.2
UBC-208ENST00000540700 SPRP35270 261 aaPredicted RBP16.28■□□□□ 0.2
UBC-208ENST00000540700 PCBP4P57723 403 aaKnown RBP16.28■□□□□ 0.2
UBC-208ENST00000540700 TMPRSS3P57727 454 aa16.28■□□□□ 0.2
UBC-208ENST00000540700 RHDQ02161 417 aa16.28■□□□□ 0.2
UBC-208ENST00000540700 RPA4Q13156 261 aa16.28■□□□□ 0.2
UBC-208ENST00000540700 ZKSCAN8Q15776 578 aaPredicted RBP16.28■□□□□ 0.2
UBC-208ENST00000540700 SYTL3Q4VX76 610 aa16.28■□□□□ 0.2
UBC-208ENST00000540700 C14orf28Q4W4Y0 310 aa16.28■□□□□ 0.2
UBC-208ENST00000540700 PLEKHS1Q5SXH7 462 aa16.28■□□□□ 0.2
UBC-208ENST00000540700 MROH9Q5TGP6 573 aa16.28■□□□□ 0.2
UBC-208ENST00000540700 BROXQ5VW32 411 aa16.28■□□□□ 0.2
UBC-208ENST00000540700 GUSBP11Q6P575 273 aa16.28■□□□□ 0.2
UBC-208ENST00000540700 CYHR1Q6ZMK1 362 aa16.28■□□□□ 0.2
UBC-208ENST00000540700 DCBLD1Q8N8Z6 715 aa16.28■□□□□ 0.2
UBC-208ENST00000540700 EPS8L3Q8TE67 593 aaKnown RBP16.28■□□□□ 0.2
UBC-208ENST00000540700 ANKRD49Q8WVL7 239 aa16.28■□□□□ 0.2
UBC-208ENST00000540700 GLMNQ92990 594 aa16.28■□□□□ 0.2
UBC-208ENST00000540700 TSSK1BQ9BXA7 367 aa16.28■□□□□ 0.2
UBC-208ENST00000540700 EURLQ9NYK6 297 aa16.28■□□□□ 0.2
UBC-208ENST00000540700 SLC39A10Q9ULF5 831 aa16.28■□□□□ 0.2
UBC-208ENST00000540700 RNF215Q9Y6U7 377 aa16.28■□□□□ 0.2
UBC-208ENST00000540700 CCDC151A5D8V7 595 aa16.27■□□□□ 0.2
UBC-208ENST00000540700 KRT87PA6NCN2 255 aa16.27■□□□□ 0.2
UBC-208ENST00000540700 FOXO6A8MYZ6 492 aa16.27■□□□□ 0.2
UBC-208ENST00000540700 PPM1DO15297 605 aa16.27■□□□□ 0.2
UBC-208ENST00000540700 VPS26AO75436 327 aa16.27■□□□□ 0.2
UBC-208ENST00000540700 ALDOAP04075 364 aaKnown RBP16.27■□□□□ 0.2
UBC-208ENST00000540700 MPOP05164 745 aa16.27■□□□□ 0.2
UBC-208ENST00000540700 NUDT17P0C025 328 aa16.27■□□□□ 0.2
UBC-208ENST00000540700 ALPPL2P10696 532 aa16.27■□□□□ 0.2
UBC-208ENST00000540700 MSH2P43246 934 aa16.27■□□□□ 0.2
UBC-208ENST00000540700 KCNC4Q03721 635 aa16.27■□□□□ 0.2
UBC-208ENST00000540700 USP10Q14694 798 aaKnown RBP16.27■□□□□ 0.2
UBC-208ENST00000540700 PERM1Q5SV97 790 aa16.27■□□□□ 0.2
UBC-208ENST00000540700 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.27■□□□□ 0.2
UBC-208ENST00000540700 ADGRD1Q6QNK2 874 aa16.27■□□□□ 0.2
UBC-208ENST00000540700 PIWIL4Q7Z3Z4 852 aaKnown RBP16.27■□□□□ 0.2
UBC-208ENST00000540700 ZNF761Q86XN6 746 aaPredicted RBP16.27■□□□□ 0.2
UBC-208ENST00000540700 PHC3Q8NDX5 983 aa16.27■□□□□ 0.2
UBC-208ENST00000540700 MZB1Q8WU39 189 aa16.27■□□□□ 0.2
UBC-208ENST00000540700 ASZ1Q8WWH4 475 aa16.27■□□□□ 0.2
UBC-208ENST00000540700 INPP5DQ92835 1189 aa16.27■□□□□ 0.2
UBC-208ENST00000540700 TMEM159Q96B96 161 aa16.27■□□□□ 0.2
UBC-208ENST00000540700 C12orf66Q96MD2 445 aa16.27■□□□□ 0.2
UBC-208ENST00000540700 TAS2R13Q9NYV9 303 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms