RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 CCDC32Q9BV29 185 aa9.31□□□□□ -0.92
CTNNA1-243ENST00000540387 CRISPLD2Q9H0B8 497 aa9.31□□□□□ -0.92
CTNNA1-243ENST00000540387 IFT46Q9NQC8 304 aa9.31□□□□□ -0.92
CTNNA1-243ENST00000540387 PRMT5O14744 637 aaPredicted RBP9.31□□□□□ -0.92
CTNNA1-243ENST00000540387 ADAM11O75078 769 aa9.31□□□□□ -0.92
CTNNA1-243ENST00000540387 MT-ND2P03891 347 aa9.31□□□□□ -0.92
CTNNA1-243ENST00000540387 ITGB3P05106 788 aa9.31□□□□□ -0.92
CTNNA1-243ENST00000540387 MPOP05164 745 aa9.31□□□□□ -0.92
CTNNA1-243ENST00000540387 PROS1P07225 676 aa9.31□□□□□ -0.92
CTNNA1-243ENST00000540387 UMPSP11172 480 aa9.31□□□□□ -0.92
CTNNA1-243ENST00000540387 BTF3P20290 206 aaKnown RBP9.31□□□□□ -0.92
CTNNA1-243ENST00000540387 HTR7P34969 479 aa9.31□□□□□ -0.92
CTNNA1-243ENST00000540387 ETV6P41212 452 aa9.31□□□□□ -0.92
CTNNA1-243ENST00000540387 OLR1P78380 273 aa9.31□□□□□ -0.92
CTNNA1-243ENST00000540387 ALDH6A1Q02252 535 aaKnown RBP9.31□□□□□ -0.92
CTNNA1-243ENST00000540387 CYP24A1Q07973 514 aa9.31□□□□□ -0.92
CTNNA1-243ENST00000540387 RGS1Q08116 209 aa9.31□□□□□ -0.92
CTNNA1-243ENST00000540387 BAMBIQ13145 260 aa9.31□□□□□ -0.92
CTNNA1-243ENST00000540387 CDK5R2Q13319 367 aa9.31□□□□□ -0.92
CTNNA1-243ENST00000540387 GRM7Q14831 915 aa9.31□□□□□ -0.92
CTNNA1-243ENST00000540387 TRIP4Q15650 581 aaPredicted RBP9.31□□□□□ -0.92
CTNNA1-243ENST00000540387 AANATQ16613 207 aa9.31□□□□□ -0.92
CTNNA1-243ENST00000540387 RBM20Q5T481 1227 aaKnown RBP9.31□□□□□ -0.92
CTNNA1-243ENST00000540387 FSTL4Q6MZW2 842 aa9.31□□□□□ -0.92
CTNNA1-243ENST00000540387 PRMT9Q6P2P2 845 aa9.31□□□□□ -0.92
CTNNA1-243ENST00000540387 CORO6Q6QEF8 472 aa9.31□□□□□ -0.92
CTNNA1-243ENST00000540387 MPZL3Q6UWV2 235 aa9.31□□□□□ -0.92
CTNNA1-243ENST00000540387 ZNF704Q6ZNC4 412 aaPredicted RBP9.31□□□□□ -0.92
CTNNA1-243ENST00000540387 TRIM48Q8IWZ4 208 aa9.31□□□□□ -0.92
CTNNA1-243ENST00000540387 BBS7Q8IWZ6 715 aa9.31□□□□□ -0.92
CTNNA1-243ENST00000540387 TMEM192Q8IY95 271 aa9.31□□□□□ -0.92
CTNNA1-243ENST00000540387 TMEM151AQ8N4L1 468 aa9.31□□□□□ -0.92
CTNNA1-243ENST00000540387 OR8K3Q8NH51 312 aa9.31□□□□□ -0.92
CTNNA1-243ENST00000540387 BPIFB1Q8TDL5 484 aa9.31□□□□□ -0.92
CTNNA1-243ENST00000540387 UBASH3BQ8TF42 649 aa9.31□□□□□ -0.92
CTNNA1-243ENST00000540387 INTS12Q96CB8 462 aaKnown RBP9.31□□□□□ -0.92
CTNNA1-243ENST00000540387 MAGEB10Q96LZ2 347 aaPredicted RBP9.31□□□□□ -0.92
CTNNA1-243ENST00000540387 RDH12Q96NR8 316 aa9.31□□□□□ -0.92
CTNNA1-243ENST00000540387 TRNT1Q96Q11 434 aaKnown RBP9.31□□□□□ -0.92
CTNNA1-243ENST00000540387 CPNE1Q99829 537 aa9.31□□□□□ -0.92
CTNNA1-243ENST00000540387 CEP41Q9BYV8 373 aa9.31□□□□□ -0.92
CTNNA1-243ENST00000540387 CDT1Q9H211 546 aa9.31□□□□□ -0.92
CTNNA1-243ENST00000540387 TASP1Q9H6P5 420 aa9.31□□□□□ -0.92
CTNNA1-243ENST00000540387 PIH1D1Q9NWS0 290 aaKnown RBP9.31□□□□□ -0.92
CTNNA1-243ENST00000540387 ADAM28Q9UKQ2 775 aa9.31□□□□□ -0.92
CTNNA1-243ENST00000540387 STAP1Q9ULZ2 295 aa9.31□□□□□ -0.92
CTNNA1-243ENST00000540387 PEX16Q9Y5Y5 336 aa9.31□□□□□ -0.92
CTNNA1-243ENST00000540387 A0A0B4J293 547 aa9.3□□□□□ -0.92
CTNNA1-243ENST00000540387 SLC12A8A0AV02 714 aa9.3□□□□□ -0.92
CTNNA1-243ENST00000540387 PRR23AA6NEV1 266 aa9.3□□□□□ -0.92
CTNNA1-243ENST00000540387 M0QZ92 97 aa9.3□□□□□ -0.92
CTNNA1-243ENST00000540387 FXYD1O00168 92 aa9.3□□□□□ -0.92
CTNNA1-243ENST00000540387 AIREO43918 545 aa9.3□□□□□ -0.92
CTNNA1-243ENST00000540387 NOBOXO60393 691 aa9.3□□□□□ -0.92
CTNNA1-243ENST00000540387 TSC22D2O75157 780 aa9.3□□□□□ -0.92
CTNNA1-243ENST00000540387 HPRP00739 348 aa9.3□□□□□ -0.92
CTNNA1-243ENST00000540387 CD9P21926 228 aa9.3□□□□□ -0.92
CTNNA1-243ENST00000540387 SLC6A2P23975 617 aa9.3□□□□□ -0.92
CTNNA1-243ENST00000540387 CUL2Q13617 745 aa9.3□□□□□ -0.92
CTNNA1-243ENST00000540387 CACHD1Q5VU97 1274 aa9.3□□□□□ -0.92
CTNNA1-243ENST00000540387 C16orf62Q7Z3J2 963 aa9.3□□□□□ -0.92
CTNNA1-243ENST00000540387 CCDC190Q86UF4 302 aa9.3□□□□□ -0.92
CTNNA1-243ENST00000540387 PM20D2Q8IYS1 436 aa9.3□□□□□ -0.92
CTNNA1-243ENST00000540387 OR8H3Q8N146 312 aa9.3□□□□□ -0.92
CTNNA1-243ENST00000540387 MINDY1Q8N5J2 469 aa9.3□□□□□ -0.92
CTNNA1-243ENST00000540387 AADATQ8N5Z0 425 aa9.3□□□□□ -0.92
CTNNA1-243ENST00000540387 TXNDC5Q8NBS9 432 aaKnown RBP9.3□□□□□ -0.92
CTNNA1-243ENST00000540387 RDH11Q8TC12 318 aa9.3□□□□□ -0.92
CTNNA1-243ENST00000540387 ST8SIA4Q92187 359 aa9.3□□□□□ -0.92
CTNNA1-243ENST00000540387 ZNF516Q92618 1163 aa9.3□□□□□ -0.92
CTNNA1-243ENST00000540387 RIT1Q92963 219 aa9.3□□□□□ -0.92
CTNNA1-243ENST00000540387 ZNF566Q969W8 418 aa9.3□□□□□ -0.92
CTNNA1-243ENST00000540387 PTERQ96BW5 349 aa9.3□□□□□ -0.92
CTNNA1-243ENST00000540387 PYCR2Q96C36 320 aa9.3□□□□□ -0.92
CTNNA1-243ENST00000540387 RNF31Q96EP0 1072 aa9.3□□□□□ -0.92
CTNNA1-243ENST00000540387 TRMT61AQ96FX7 289 aaKnown RBP9.3□□□□□ -0.92
CTNNA1-243ENST00000540387 TEKT5Q96M29 485 aa9.3□□□□□ -0.92
CTNNA1-243ENST00000540387 RBBP8Q99708 897 aa9.3□□□□□ -0.92
CTNNA1-243ENST00000540387 SEC22CQ9BRL7 303 aa9.3□□□□□ -0.92
CTNNA1-243ENST00000540387 FAM49BQ9NUQ9 324 aa9.3□□□□□ -0.92
CTNNA1-243ENST00000540387 DCAF16Q9NXF7 216 aa9.3□□□□□ -0.92
CTNNA1-243ENST00000540387 GTSE1Q9NYZ3 720 aa9.3□□□□□ -0.92
CTNNA1-243ENST00000540387 TRPV2Q9Y5S1 764 aa9.3□□□□□ -0.92
CTNNA1-243ENST00000540387 KLF2Q9Y5W3 355 aaPredicted RBP9.3□□□□□ -0.92
CTNNA1-243ENST00000540387 LYVE1Q9Y5Y7 322 aa9.3□□□□□ -0.92
CTNNA1-243ENST00000540387 CACNG2Q9Y698 323 aa9.3□□□□□ -0.92
CTNNA1-243ENST00000540387 BTN3A3O00478 584 aa9.3□□□□□ -0.92
CTNNA1-243ENST00000540387 OGTO15294 1046 aa9.3□□□□□ -0.92
CTNNA1-243ENST00000540387 STX7O15400 261 aaKnown RBP9.3□□□□□ -0.92
CTNNA1-243ENST00000540387 ANGPTL1O95841 491 aa9.3□□□□□ -0.92
CTNNA1-243ENST00000540387 IFNA14P01570 189 aa9.3□□□□□ -0.92
CTNNA1-243ENST00000540387 HMGN1P05114 100 aa9.3□□□□□ -0.92
CTNNA1-243ENST00000540387 APOA4P06727 396 aa9.3□□□□□ -0.92
CTNNA1-243ENST00000540387 FMO3P31513 532 aa9.3□□□□□ -0.92
CTNNA1-243ENST00000540387 SPRP35270 261 aaPredicted RBP9.3□□□□□ -0.92
CTNNA1-243ENST00000540387 GLRBP48167 497 aa9.3□□□□□ -0.92
CTNNA1-243ENST00000540387 GSK3BP49841 420 aa9.3□□□□□ -0.92
CTNNA1-243ENST00000540387 TPMTP51580 245 aa9.3□□□□□ -0.92
CTNNA1-243ENST00000540387 SESN2P58004 480 aaPredicted RBP9.3□□□□□ -0.92
CTNNA1-243ENST00000540387 ZNF691Q5VV52 312 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms