RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 TBC1D10AQ9BXI6 508 aa6.8□□□□□ -1.32
LPCAT3-209ENST00000540060 FUT8Q9BYC5 575 aa6.8□□□□□ -1.32
LPCAT3-209ENST00000540060 TXLNGYQ9BZA5 131 aa6.8□□□□□ -1.32
LPCAT3-209ENST00000540060 ABCG4Q9H172 646 aa6.8□□□□□ -1.32
LPCAT3-209ENST00000540060 LRRN3Q9H3W5 708 aa6.8□□□□□ -1.32
LPCAT3-209ENST00000540060 RHOJQ9H4E5 214 aa6.8□□□□□ -1.32
LPCAT3-209ENST00000540060 EPB41L1Q9H4G0 881 aa6.8□□□□□ -1.32
LPCAT3-209ENST00000540060 ACSS3Q9H6R3 686 aa6.8□□□□□ -1.32
LPCAT3-209ENST00000540060 KIR3DX1Q9H7L2 352 aa6.8□□□□□ -1.32
LPCAT3-209ENST00000540060 MVB12BQ9H7P6 319 aa6.8□□□□□ -1.32
LPCAT3-209ENST00000540060 SYNDIG1Q9H7V2 258 aa6.8□□□□□ -1.32
LPCAT3-209ENST00000540060 KCNK4Q9NYG8 393 aa6.8□□□□□ -1.32
LPCAT3-209ENST00000540060 OGFRQ9NZT2 677 aa6.8□□□□□ -1.32
LPCAT3-209ENST00000540060 KLHL42Q9P2K6 505 aa6.8□□□□□ -1.32
LPCAT3-209ENST00000540060 SLC24A2Q9UI40 661 aa6.8□□□□□ -1.32
LPCAT3-209ENST00000540060 CLCA2Q9UQC9 943 aa6.8□□□□□ -1.32
LPCAT3-209ENST00000540060 HEBP2Q9Y5Z4 205 aa6.8□□□□□ -1.32
LPCAT3-209ENST00000540060 KIF26BQ2KJY2 2108 aa6.8□□□□□ -1.32
LPCAT3-209ENST00000540060 MN1Q10571 1320 aaPredicted RBP6.79□□□□□ -1.32
LPCAT3-209ENST00000540060 DMXL2Q8TDJ6 3036 aa6.79□□□□□ -1.32
LPCAT3-209ENST00000540060 FAM95CA0A1B0GW59 222 aa6.79□□□□□ -1.32
LPCAT3-209ENST00000540060 FAM149AA5PLN7 773 aa6.79□□□□□ -1.32
LPCAT3-209ENST00000540060 FAM221BA6H8Z2 402 aa6.79□□□□□ -1.32
LPCAT3-209ENST00000540060 EIF3FO00303 357 aaPredicted RBP6.79□□□□□ -1.32
LPCAT3-209ENST00000540060 ZW10O43264 779 aa6.79□□□□□ -1.32
LPCAT3-209ENST00000540060 VPS26AO75436 327 aa6.79□□□□□ -1.32
LPCAT3-209ENST00000540060 UBXN7O94888 489 aa6.79□□□□□ -1.32
LPCAT3-209ENST00000540060 MATN4O95460 622 aa6.79□□□□□ -1.32
LPCAT3-209ENST00000540060 ACSL3O95573 720 aa6.79□□□□□ -1.32
LPCAT3-209ENST00000540060 CPNE6O95741 557 aa6.79□□□□□ -1.32
LPCAT3-209ENST00000540060 MT-CO3P00414 261 aa6.79□□□□□ -1.32
LPCAT3-209ENST00000540060 FAM153BP0C7A2 387 aa6.79□□□□□ -1.32
LPCAT3-209ENST00000540060 PHBP35232 272 aa6.79□□□□□ -1.32
LPCAT3-209ENST00000540060 GP5P40197 560 aa6.79□□□□□ -1.32
LPCAT3-209ENST00000540060 LIMK2P53671 638 aa6.79□□□□□ -1.32
LPCAT3-209ENST00000540060 CDKN2DP55273 166 aa6.79□□□□□ -1.32
LPCAT3-209ENST00000540060 TUBB4BP68371 445 aa6.79□□□□□ -1.32
LPCAT3-209ENST00000540060 SHC2P98077 582 aa6.79□□□□□ -1.32
LPCAT3-209ENST00000540060 CFHR1Q03591 330 aa6.79□□□□□ -1.32
LPCAT3-209ENST00000540060 ILF2Q12905 390 aaKnown RBP6.79□□□□□ -1.32
LPCAT3-209ENST00000540060 SQSTM1Q13501 440 aa6.79□□□□□ -1.32
LPCAT3-209ENST00000540060 SLMAPQ14BN4 828 aa6.79□□□□□ -1.32
LPCAT3-209ENST00000540060 PLCL1Q15111 1095 aa6.79□□□□□ -1.32
LPCAT3-209ENST00000540060 CLPPQ16740 277 aaPredicted RBP6.79□□□□□ -1.32
LPCAT3-209ENST00000540060 ISXQ2M1V0 245 aa6.79□□□□□ -1.32
LPCAT3-209ENST00000540060 TTLL9Q3SXZ7 439 aa6.79□□□□□ -1.32
LPCAT3-209ENST00000540060 AMZ1Q400G9 498 aa6.79□□□□□ -1.32
LPCAT3-209ENST00000540060 FAM153CQ494X1 144 aa6.79□□□□□ -1.32
LPCAT3-209ENST00000540060 MAP9Q49MG5 647 aa6.79□□□□□ -1.32
LPCAT3-209ENST00000540060 ACSBG2Q5FVE4 666 aa6.79□□□□□ -1.32
LPCAT3-209ENST00000540060 HECTD2Q5U5R9 776 aa6.79□□□□□ -1.32
LPCAT3-209ENST00000540060 NKAIN2Q5VXU1 208 aa6.79□□□□□ -1.32
LPCAT3-209ENST00000540060 UNC5DQ6UXZ4 953 aa6.79□□□□□ -1.32
LPCAT3-209ENST00000540060 NEK10Q6ZWH5 1172 aa6.79□□□□□ -1.32
LPCAT3-209ENST00000540060 B3GNT8Q7Z7M8 397 aa6.79□□□□□ -1.32
LPCAT3-209ENST00000540060 SLITRK4Q8IW52 837 aa6.79□□□□□ -1.32
LPCAT3-209ENST00000540060 TBC1D21Q8IYX1 336 aa6.79□□□□□ -1.32
LPCAT3-209ENST00000540060 CACTIN-AS1Q8N1I8 211 aa6.79□□□□□ -1.32
LPCAT3-209ENST00000540060 GPATCH11Q8N954 259 aa6.79□□□□□ -1.32
LPCAT3-209ENST00000540060 ACVR1CQ8NER5 493 aa6.79□□□□□ -1.32
LPCAT3-209ENST00000540060 OR52E1Q8NGJ3 308 aa6.79□□□□□ -1.32
LPCAT3-209ENST00000540060 OR10G6Q8NH81 332 aa6.79□□□□□ -1.32
LPCAT3-209ENST00000540060 ZFPM2Q8WW38 1151 aa6.79□□□□□ -1.32
LPCAT3-209ENST00000540060 JPH3Q8WXH2 748 aaPredicted RBP6.79□□□□□ -1.32
LPCAT3-209ENST00000540060 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.79□□□□□ -1.32
LPCAT3-209ENST00000540060 DEPDC7Q96QD5 511 aa6.79□□□□□ -1.32
LPCAT3-209ENST00000540060 FERD3LQ96RJ6 166 aa6.79□□□□□ -1.32
LPCAT3-209ENST00000540060 OLFM1Q99784 485 aa6.79□□□□□ -1.32
LPCAT3-209ENST00000540060 HGH1Q9BTY7 390 aa6.79□□□□□ -1.32
LPCAT3-209ENST00000540060 SCNM1Q9BWG6 230 aa6.79□□□□□ -1.32
LPCAT3-209ENST00000540060 TRIT1Q9H3H1 467 aaKnown RBP6.79□□□□□ -1.32
LPCAT3-209ENST00000540060 RDH14Q9HBH5 336 aa6.79□□□□□ -1.32
LPCAT3-209ENST00000540060 TAS2R13Q9NYV9 303 aa6.79□□□□□ -1.32
LPCAT3-209ENST00000540060 TMEM9Q9P0T7 183 aa6.79□□□□□ -1.32
LPCAT3-209ENST00000540060 TRMT6Q9UJA5 497 aaKnown RBP6.79□□□□□ -1.32
LPCAT3-209ENST00000540060 KLK13Q9UKR3 277 aa6.79□□□□□ -1.32
LPCAT3-209ENST00000540060 ATXN7L1Q9ULK2 861 aaPredicted RBP6.79□□□□□ -1.32
LPCAT3-209ENST00000540060 RUVBL2Q9Y230 463 aaKnown RBP6.79□□□□□ -1.32
LPCAT3-209ENST00000540060 ASF1AQ9Y294 204 aa6.79□□□□□ -1.32
LPCAT3-209ENST00000540060 DHRS7Q9Y394 339 aa6.79□□□□□ -1.32
LPCAT3-209ENST00000540060 NEUROG3Q9Y4Z2 214 aa6.79□□□□□ -1.32
LPCAT3-209ENST00000540060 ENTPD2Q9Y5L3 495 aa6.79□□□□□ -1.32
LPCAT3-209ENST00000540060 NFS1Q9Y697 457 aa6.79□□□□□ -1.32
LPCAT3-209ENST00000540060 COLEC10Q9Y6Z7 277 aa6.79□□□□□ -1.32
LPCAT3-209ENST00000540060 CELSR3Q9NYQ7 3312 aa6.78□□□□□ -1.32
LPCAT3-209ENST00000540060 IGHV5-10-1A0A0J9YXX1 117 aa6.78□□□□□ -1.32
LPCAT3-209ENST00000540060 OR5K3A6NET4 321 aa6.78□□□□□ -1.32
LPCAT3-209ENST00000540060 RIPK2O43353 540 aa6.78□□□□□ -1.32
LPCAT3-209ENST00000540060 CSO75390 466 aaKnown RBP6.78□□□□□ -1.32
LPCAT3-209ENST00000540060 PSIP1O75475 530 aaKnown RBP6.78□□□□□ -1.32
LPCAT3-209ENST00000540060 FAM155BO75949 473 aa6.78□□□□□ -1.32
LPCAT3-209ENST00000540060 WISP3O95389 354 aaPredicted RBP6.78□□□□□ -1.32
LPCAT3-209ENST00000540060 TSPAN12O95859 305 aa6.78□□□□□ -1.32
LPCAT3-209ENST00000540060 C9P02748 559 aa6.78□□□□□ -1.32
LPCAT3-209ENST00000540060 RPN2P04844 631 aa6.78□□□□□ -1.32
LPCAT3-209ENST00000540060 PROS1P07225 676 aa6.78□□□□□ -1.32
LPCAT3-209ENST00000540060 ABHD2P08910 425 aa6.78□□□□□ -1.32
LPCAT3-209ENST00000540060 TPBGLP0DKB5 382 aa6.78□□□□□ -1.32
LPCAT3-209ENST00000540060 MPC1LP0DKB6 136 aa6.78□□□□□ -1.32
LPCAT3-209ENST00000540060 CBSLP0DN79 551 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms