RNA–Protein interactions for RNA: ENST00000539975.5

SNHG1-212, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 955 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-212ENST00000539975 TP53INP1Q96A56 240 aa6.34□□□□□ -1.39
SNHG1-212ENST00000539975 TSPAN17Q96FV3 270 aa6.34□□□□□ -1.39
SNHG1-212ENST00000539975 C9orf72Q96LT7 481 aa6.34□□□□□ -1.39
SNHG1-212ENST00000539975 PWWP2AQ96N64 755 aa6.34□□□□□ -1.39
SNHG1-212ENST00000539975 CAMK1GQ96NX5 476 aa6.34□□□□□ -1.39
SNHG1-212ENST00000539975 FCRL3Q96P31 734 aaPredicted RBP6.34□□□□□ -1.39
SNHG1-212ENST00000539975 CYTH2Q99418 400 aa6.34□□□□□ -1.39
SNHG1-212ENST00000539975 NPHS2Q9NP85 383 aa6.34□□□□□ -1.39
SNHG1-212ENST00000539975 PRDM8Q9NQV8 689 aa6.34□□□□□ -1.39
SNHG1-212ENST00000539975 SPATS2LQ9NUQ6 558 aaKnown RBP6.34□□□□□ -1.39
SNHG1-212ENST00000539975 TAS2R13Q9NYV9 303 aa6.34□□□□□ -1.39
SNHG1-212ENST00000539975 AKAP7Q9P0M2 348 aaPredicted RBP6.34□□□□□ -1.39
SNHG1-212ENST00000539975 MARCH4Q9P2E8 410 aaPredicted RBP6.34□□□□□ -1.39
SNHG1-212ENST00000539975 LRIT1Q9P2V4 623 aa6.34□□□□□ -1.39
SNHG1-212ENST00000539975 TMPRSS11EQ9UL52 423 aa6.34□□□□□ -1.39
SNHG1-212ENST00000539975 CORO1CQ9ULV4 474 aaPredicted RBP6.34□□□□□ -1.39
SNHG1-212ENST00000539975 NFU1Q9UMS0 254 aa6.34□□□□□ -1.39
SNHG1-212ENST00000539975 THADAQ6YHU6 1953 aa6.33□□□□□ -1.4
SNHG1-212ENST00000539975 PLXND1Q9Y4D7 1925 aa6.33□□□□□ -1.4
SNHG1-212ENST00000539975 A0A087WUV0 522 aaPredicted RBP6.33□□□□□ -1.4
SNHG1-212ENST00000539975 MEGF11A6BM72 1044 aa6.33□□□□□ -1.4
SNHG1-212ENST00000539975 TMX2-CTNND1H3BSU7 103 aa6.33□□□□□ -1.4
SNHG1-212ENST00000539975 DYRK3O43781 588 aa6.33□□□□□ -1.4
SNHG1-212ENST00000539975 OR1I1O60431 355 aa6.33□□□□□ -1.4
SNHG1-212ENST00000539975 BANF1O75531 89 aa6.33□□□□□ -1.4
SNHG1-212ENST00000539975 RFPL3O75679 317 aa6.33□□□□□ -1.4
SNHG1-212ENST00000539975 FUCA1P04066 466 aa6.33□□□□□ -1.4
SNHG1-212ENST00000539975 PRSS56P0CW18 603 aa6.33□□□□□ -1.4
SNHG1-212ENST00000539975 PNLIPP16233 465 aa6.33□□□□□ -1.4
SNHG1-212ENST00000539975 AMD1P17707 334 aa6.33□□□□□ -1.4
SNHG1-212ENST00000539975 ITGB6P18564 788 aa6.33□□□□□ -1.4
SNHG1-212ENST00000539975 SAT1P21673 171 aa6.33□□□□□ -1.4
SNHG1-212ENST00000539975 RPS3P23396 243 aaKnown RBP eCLIP6.33□□□□□ -1.4
SNHG1-212ENST00000539975 ACP1P24666 158 aa6.33□□□□□ -1.4
SNHG1-212ENST00000539975 MAP4P27816 1152 aaKnown RBP6.33□□□□□ -1.4
SNHG1-212ENST00000539975 SSTR1P30872 391 aa6.33□□□□□ -1.4
SNHG1-212ENST00000539975 SPRP35270 261 aaPredicted RBP6.33□□□□□ -1.4
SNHG1-212ENST00000539975 SLC1A2P43004 574 aa6.33□□□□□ -1.4
SNHG1-212ENST00000539975 GPR3P46089 330 aa6.33□□□□□ -1.4
SNHG1-212ENST00000539975 LEPRP48357 1165 aaKnown RBP6.33□□□□□ -1.4
SNHG1-212ENST00000539975 CD151P48509 253 aa6.33□□□□□ -1.4
SNHG1-212ENST00000539975 PMS2P54278 862 aa6.33□□□□□ -1.4
SNHG1-212ENST00000539975 PRKAA1Q13131 559 aa6.33□□□□□ -1.4
SNHG1-212ENST00000539975 NAB1Q13506 487 aa6.33□□□□□ -1.4
SNHG1-212ENST00000539975 NFE2L1Q14494 772 aa6.33□□□□□ -1.4
SNHG1-212ENST00000539975 UAP1Q16222 522 aaPredicted RBP6.33□□□□□ -1.4
SNHG1-212ENST00000539975 KYNUQ16719 465 aa6.33□□□□□ -1.4
SNHG1-212ENST00000539975 TYSND1Q2T9J0 566 aa6.33□□□□□ -1.4
SNHG1-212ENST00000539975 KLHL38Q2WGJ6 581 aa6.33□□□□□ -1.4
SNHG1-212ENST00000539975 MAP9Q49MG5 647 aa6.33□□□□□ -1.4
SNHG1-212ENST00000539975 KHDC1Q4VXA5 237 aaKnown RBP6.33□□□□□ -1.4
SNHG1-212ENST00000539975 RPS26P11Q5JNZ5 115 aaPredicted RBP6.33□□□□□ -1.4
SNHG1-212ENST00000539975 PPM1JQ5JR12 505 aa6.33□□□□□ -1.4
SNHG1-212ENST00000539975 PLEKHS1Q5SXH7 462 aa6.33□□□□□ -1.4
SNHG1-212ENST00000539975 AGAP9Q5VTM2 703 aa6.33□□□□□ -1.4
SNHG1-212ENST00000539975 STEAP4Q687X5 459 aa6.33□□□□□ -1.4
SNHG1-212ENST00000539975 IYDQ6PHW0 289 aa6.33□□□□□ -1.4
SNHG1-212ENST00000539975 OGFOD3Q6PK18 319 aa6.33□□□□□ -1.4
SNHG1-212ENST00000539975 ABRAXAS1Q6UWZ7 409 aa6.33□□□□□ -1.4
SNHG1-212ENST00000539975 ZDHHC24Q6UX98 284 aa6.33□□□□□ -1.4
SNHG1-212ENST00000539975 WASH2PQ6VEQ5 465 aa6.33□□□□□ -1.4
SNHG1-212ENST00000539975 ACAD11Q709F0 780 aa6.33□□□□□ -1.4
SNHG1-212ENST00000539975 TRMT10CQ7L0Y3 403 aaKnown RBP6.33□□□□□ -1.4
SNHG1-212ENST00000539975 EFL1Q7Z2Z2 1120 aaKnown RBP6.33□□□□□ -1.4
SNHG1-212ENST00000539975 STRA8Q7Z7C7 330 aa6.33□□□□□ -1.4
SNHG1-212ENST00000539975 GLRX5Q86SX6 157 aa6.33□□□□□ -1.4
SNHG1-212ENST00000539975 PIP4P1Q86T03 277 aa6.33□□□□□ -1.4
SNHG1-212ENST00000539975 ZNF547Q8IVP9 402 aa6.33□□□□□ -1.4
SNHG1-212ENST00000539975 DENND6AQ8IWF6 608 aa6.33□□□□□ -1.4
SNHG1-212ENST00000539975 GALNT15Q8N3T1 639 aa6.33□□□□□ -1.4
SNHG1-212ENST00000539975 ARL14Q8N4G2 192 aa6.33□□□□□ -1.4
SNHG1-212ENST00000539975 GPATCH11Q8N954 259 aa6.33□□□□□ -1.4
SNHG1-212ENST00000539975 C2CD4AQ8NCU7 369 aaPredicted RBP6.33□□□□□ -1.4
SNHG1-212ENST00000539975 OR10G6Q8NH81 332 aa6.33□□□□□ -1.4
SNHG1-212ENST00000539975 IFI44Q8TCB0 444 aa6.33□□□□□ -1.4
SNHG1-212ENST00000539975 ZFPM2Q8WW38 1151 aa6.33□□□□□ -1.4
SNHG1-212ENST00000539975 LPGAT1Q92604 370 aa6.33□□□□□ -1.4
SNHG1-212ENST00000539975 KCNJ9Q92806 393 aa6.33□□□□□ -1.4
SNHG1-212ENST00000539975 C12orf66Q96MD2 445 aa6.33□□□□□ -1.4
SNHG1-212ENST00000539975 FERD3LQ96RJ6 166 aa6.33□□□□□ -1.4
SNHG1-212ENST00000539975 CPNE1Q99829 537 aa6.33□□□□□ -1.4
SNHG1-212ENST00000539975 BOCQ9BWV1 1114 aa6.33□□□□□ -1.4
SNHG1-212ENST00000539975 TRIT1Q9H3H1 467 aaKnown RBP6.33□□□□□ -1.4
SNHG1-212ENST00000539975 EPB41L1Q9H4G0 881 aa6.33□□□□□ -1.4
SNHG1-212ENST00000539975 COG4Q9H9E3 785 aa6.33□□□□□ -1.4
SNHG1-212ENST00000539975 WASH6PQ9NQA3 447 aa6.33□□□□□ -1.4
SNHG1-212ENST00000539975 FBXO6Q9NRD1 293 aaPredicted RBP6.33□□□□□ -1.4
SNHG1-212ENST00000539975 POT1Q9NUX5 634 aa6.33□□□□□ -1.4
SNHG1-212ENST00000539975 IMP3Q9NV31 184 aaKnown RBP6.33□□□□□ -1.4
SNHG1-212ENST00000539975 KCNK4Q9NYG8 393 aa6.33□□□□□ -1.4
SNHG1-212ENST00000539975 DLL3Q9NYJ7 618 aa6.33□□□□□ -1.4
SNHG1-212ENST00000539975 IL1RAPL1Q9NZN1 696 aa6.33□□□□□ -1.4
SNHG1-212ENST00000539975 CPNE7Q9UBL6 633 aa6.33□□□□□ -1.4
SNHG1-212ENST00000539975 TBC1D29Q9UFV1 150 aa6.33□□□□□ -1.4
SNHG1-212ENST00000539975 SLC23A2Q9UGH3 650 aa6.33□□□□□ -1.4
SNHG1-212ENST00000539975 POLG2Q9UHN1 485 aa6.33□□□□□ -1.4
SNHG1-212ENST00000539975 TRMT6Q9UJA5 497 aaKnown RBP6.33□□□□□ -1.4
SNHG1-212ENST00000539975 PSMD13Q9UNM6 376 aa6.33□□□□□ -1.4
SNHG1-212ENST00000539975 ASF1AQ9Y294 204 aa6.33□□□□□ -1.4
SNHG1-212ENST00000539975 BTBD3Q9Y2F9 522 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms