RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 RIF1Q5UIP0 2472 aaKnown RBP15.06■□□□□ 0
DDB1-216ENST00000539739 ZFC3H1O60293 1989 aaKnown RBP15.06■□□□□ 0
DDB1-216ENST00000539739 TRBV23OR9-2A0A075B6M9 112 aa15.06■□□□□ 0
DDB1-216ENST00000539739 OR52A4PA6NMU1 304 aa15.06■□□□□ 0
DDB1-216ENST00000539739 GFRA3O60609 400 aa15.06■□□□□ 0
DDB1-216ENST00000539739 GIMD1P0DJR0 217 aa15.06■□□□□ 0
DDB1-216ENST00000539739 XRCC1P18887 633 aaPredicted RBP15.06■□□□□ 0
DDB1-216ENST00000539739 ACADLP28330 430 aa15.06■□□□□ 0
DDB1-216ENST00000539739 NDUFS1P28331 727 aa15.06■□□□□ 0
DDB1-216ENST00000539739 RPIAP49247 311 aa15.06■□□□□ 0
DDB1-216ENST00000539739 WLSQ5T9L3 541 aa15.06■□□□□ 0
DDB1-216ENST00000539739 TTC23LQ6PF05 361 aa15.06■□□□□ 0
DDB1-216ENST00000539739 UNC5DQ6UXZ4 953 aa15.06■□□□□ 0
DDB1-216ENST00000539739 CYHR1Q6ZMK1 362 aa15.06■□□□□ 0
DDB1-216ENST00000539739 SFRP1Q8N474 314 aa15.06■□□□□ 0
DDB1-216ENST00000539739 EID2Q8N6I1 236 aa15.06■□□□□ 0
DDB1-216ENST00000539739 SETD7Q8WTS6 366 aaKnown RBP15.06■□□□□ 0
DDB1-216ENST00000539739 MZB1Q8WU39 189 aa15.06■□□□□ 0
DDB1-216ENST00000539739 BATF3Q9NR55 127 aa15.06■□□□□ 0
DDB1-216ENST00000539739 NCKIPSDQ9NZQ3 722 aa15.06■□□□□ 0
DDB1-216ENST00000539739 SCHIP1Q9P0W5 487 aaPredicted RBP15.06■□□□□ 0
DDB1-216ENST00000539739 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.06■□□□□ 0
DDB1-216ENST00000539739 ASF1AQ9Y294 204 aa15.06■□□□□ 0
DDB1-216ENST00000539739 LAMA1P25391 3075 aa15.05■□□□□ 0
DDB1-216ENST00000539739 ARHGEF17Q96PE2 2063 aaPredicted RBP15.05■□□□□ 0
DDB1-216ENST00000539739 TRIM38O00635 465 aa15.05■□□□□ -0
DDB1-216ENST00000539739 NOBOXO60393 691 aa15.05■□□□□ -0
DDB1-216ENST00000539739 RFPL1O75677 317 aa15.05■□□□□ -0
DDB1-216ENST00000539739 WISP3O95389 354 aaPredicted RBP15.05■□□□□ -0
DDB1-216ENST00000539739 TSPAN12O95859 305 aa15.05■□□□□ -0
DDB1-216ENST00000539739 VIPP01282 170 aa15.05■□□□□ -0
DDB1-216ENST00000539739 LTA4HP09960 611 aaKnown RBP15.05■□□□□ -0
DDB1-216ENST00000539739 MTHFD1P11586 935 aaKnown RBP15.05■□□□□ -0
DDB1-216ENST00000539739 CSRP3P50461 194 aa15.05■□□□□ -0
DDB1-216ENST00000539739 ATP6V0D1P61421 351 aa15.05■□□□□ -0
DDB1-216ENST00000539739 CSHL1Q14406 222 aa15.05■□□□□ -0
DDB1-216ENST00000539739 FAM83EQ2M2I3 478 aa15.05■□□□□ -0
DDB1-216ENST00000539739 C14orf28Q4W4Y0 310 aa15.05■□□□□ -0
DDB1-216ENST00000539739 PPM1JQ5JR12 505 aa15.05■□□□□ -0
DDB1-216ENST00000539739 KLC3Q6P597 504 aa15.05■□□□□ -0
DDB1-216ENST00000539739 PIWIL4Q7Z3Z4 852 aaKnown RBP15.05■□□□□ -0
DDB1-216ENST00000539739 FAM181AQ8N9Y4 354 aa15.05■□□□□ -0
DDB1-216ENST00000539739 GPR156Q8NFN8 814 aa15.05■□□□□ -0
DDB1-216ENST00000539739 MAGEC3Q8TD91 643 aa15.05■□□□□ -0
DDB1-216ENST00000539739 RHBDD1Q8TEB9 315 aa15.05■□□□□ -0
DDB1-216ENST00000539739 SLC37A2Q8TED4 501 aa15.05■□□□□ -0
DDB1-216ENST00000539739 ANKRD49Q8WVL7 239 aa15.05■□□□□ -0
DDB1-216ENST00000539739 UBXN10Q96LJ8 280 aa15.05■□□□□ -0
DDB1-216ENST00000539739 FERD3LQ96RJ6 166 aa15.05■□□□□ -0
DDB1-216ENST00000539739 DERL2Q9GZP9 239 aa15.05■□□□□ -0
DDB1-216ENST00000539739 STMN4Q9H169 189 aaPredicted RBP15.05■□□□□ -0
DDB1-216ENST00000539739 MVB12BQ9H7P6 319 aa15.05■□□□□ -0
DDB1-216ENST00000539739 NMRAL1Q9HBL8 299 aa15.05■□□□□ -0
DDB1-216ENST00000539739 POT1Q9NUX5 634 aa15.05■□□□□ -0
DDB1-216ENST00000539739 EVA1BQ9NVM1 165 aa15.05■□□□□ -0
DDB1-216ENST00000539739 CPNE7Q9UBL6 633 aa15.05■□□□□ -0
DDB1-216ENST00000539739 CFAP20Q9Y6A4 193 aaKnown RBP15.05■□□□□ -0
DDB1-216ENST00000539739 FRYLO94915 3013 aa15.05■□□□□ -0
DDB1-216ENST00000539739 DNAH14Q0VDD8 3507 aa15.04■□□□□ -0
DDB1-216ENST00000539739 A0A1W2PPM1 405 aa15.04■□□□□ -0
DDB1-216ENST00000539739 SIGLEC6O43699 453 aa15.04■□□□□ -0
DDB1-216ENST00000539739 ZBTB14O43829 449 aa15.04■□□□□ -0
DDB1-216ENST00000539739 GDF9O60383 454 aa15.04■□□□□ -0
DDB1-216ENST00000539739 SNUPNO95149 360 aaKnown RBP15.04■□□□□ -0
DDB1-216ENST00000539739 MATN4O95460 622 aa15.04■□□□□ -0
DDB1-216ENST00000539739 CATP04040 527 aaKnown RBP15.04■□□□□ -0
DDB1-216ENST00000539739 C8GP07360 202 aa15.04■□□□□ -0
DDB1-216ENST00000539739 PYGBP11216 843 aa15.04■□□□□ -0
DDB1-216ENST00000539739 COL6A2P12110 1019 aa15.04■□□□□ -0
DDB1-216ENST00000539739 CCNFP41002 786 aa15.04■□□□□ -0
DDB1-216ENST00000539739 SLC19A1P41440 591 aa15.04■□□□□ -0
DDB1-216ENST00000539739 HHEXQ03014 270 aa15.04■□□□□ -0
DDB1-216ENST00000539739 STPG1Q5TH74 334 aa15.04■□□□□ -0
DDB1-216ENST00000539739 SPNS2Q8IVW8 549 aa15.04■□□□□ -0
DDB1-216ENST00000539739 RBM12BQ8IXT5 1001 aaKnown RBP15.04■□□□□ -0
DDB1-216ENST00000539739 TBC1D21Q8IYX1 336 aa15.04■□□□□ -0
DDB1-216ENST00000539739 ARL14Q8N4G2 192 aa15.04■□□□□ -0
DDB1-216ENST00000539739 OR6C4Q8NGE1 309 aa15.04■□□□□ -0
DDB1-216ENST00000539739 PATE1Q8WXA2 126 aa15.04■□□□□ -0
DDB1-216ENST00000539739 ASB11Q8WXH4 323 aa15.04■□□□□ -0
DDB1-216ENST00000539739 PGM2Q96G03 612 aa15.04■□□□□ -0
DDB1-216ENST00000539739 APOLD1Q96LR9 279 aa15.04■□□□□ -0
DDB1-216ENST00000539739 TRIT1Q9H3H1 467 aaKnown RBP15.04■□□□□ -0
DDB1-216ENST00000539739 PCMTD2Q9NV79 361 aa15.04■□□□□ -0
DDB1-216ENST00000539739 ZNF624Q9P2J8 865 aaPredicted RBP15.04■□□□□ -0
DDB1-216ENST00000539739 POLG2Q9UHN1 485 aa15.04■□□□□ -0
DDB1-216ENST00000539739 PABPN1LA6NDY0 278 aaKnown RBP15.03■□□□□ -0
DDB1-216ENST00000539739 SLC16A5O15375 505 aa15.03■□□□□ -0
DDB1-216ENST00000539739 KDM1AO60341 852 aa15.03■□□□□ -0
DDB1-216ENST00000539739 KLHL2O95198 593 aa15.03■□□□□ -0
DDB1-216ENST00000539739 CD59P13987 128 aa15.03■□□□□ -0
DDB1-216ENST00000539739 MAP4P27816 1152 aaKnown RBP15.03■□□□□ -0
DDB1-216ENST00000539739 DUSP3P51452 185 aaPredicted RBP15.03■□□□□ -0
DDB1-216ENST00000539739 SP140Q13342 867 aa15.03■□□□□ -0
DDB1-216ENST00000539739 NR0B2Q15466 257 aa15.03■□□□□ -0
DDB1-216ENST00000539739 TSNAXIP1Q2TAA8 658 aa15.03■□□□□ -0
DDB1-216ENST00000539739 TUBB8Q3ZCM7 444 aa15.03■□□□□ -0
DDB1-216ENST00000539739 UBE2R2Q712K3 238 aaPredicted RBP15.03■□□□□ -0
DDB1-216ENST00000539739 TRABD2AQ86V40 505 aa15.03■□□□□ -0
DDB1-216ENST00000539739 C17orf82Q86X59 251 aaPredicted RBP15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms