RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 TCEA3O75764 348 aa12.37□□□□□ -0.43
TSPAN9-207ENST00000539631 UBXN7O94888 489 aa12.37□□□□□ -0.43
TSPAN9-207ENST00000539631 PROS1P07225 676 aa12.37□□□□□ -0.43
TSPAN9-207ENST00000539631 MPC1LP0DKB6 136 aa12.37□□□□□ -0.43
TSPAN9-207ENST00000539631 HOXB3P14651 431 aaPredicted RBP12.37□□□□□ -0.43
TSPAN9-207ENST00000539631 JUPP14923 745 aa12.37□□□□□ -0.43
TSPAN9-207ENST00000539631 AMD1P17707 334 aa12.37□□□□□ -0.43
TSPAN9-207ENST00000539631 CD9P21926 228 aa12.37□□□□□ -0.43
TSPAN9-207ENST00000539631 ATP5DP30049 168 aa12.37□□□□□ -0.43
TSPAN9-207ENST00000539631 CSF2RBP32927 897 aa12.37□□□□□ -0.43
TSPAN9-207ENST00000539631 PDX1P52945 283 aa12.37□□□□□ -0.43
TSPAN9-207ENST00000539631 TAS2R39P59534 338 aa12.37□□□□□ -0.43
TSPAN9-207ENST00000539631 GPLD1P80108 840 aa12.37□□□□□ -0.43
TSPAN9-207ENST00000539631 PDAP1Q13442 181 aaKnown RBP12.37□□□□□ -0.43
TSPAN9-207ENST00000539631 SQSTM1Q13501 440 aa12.37□□□□□ -0.43
TSPAN9-207ENST00000539631 NAB1Q13506 487 aa12.37□□□□□ -0.43
TSPAN9-207ENST00000539631 MAP9Q49MG5 647 aa12.37□□□□□ -0.43
TSPAN9-207ENST00000539631 GRTP1Q5TC63 336 aa12.37□□□□□ -0.43
TSPAN9-207ENST00000539631 UNC5DQ6UXZ4 953 aa12.37□□□□□ -0.43
TSPAN9-207ENST00000539631 CYHR1Q6ZMK1 362 aa12.37□□□□□ -0.43
TSPAN9-207ENST00000539631 ZNF574Q6ZN55 896 aaPredicted RBP12.37□□□□□ -0.43
TSPAN9-207ENST00000539631 RBM44Q6ZP01 1051 aaKnown RBP12.37□□□□□ -0.43
TSPAN9-207ENST00000539631 TRMT10CQ7L0Y3 403 aaKnown RBP12.37□□□□□ -0.43
TSPAN9-207ENST00000539631 B3GNT8Q7Z7M8 397 aa12.37□□□□□ -0.43
TSPAN9-207ENST00000539631 TMPRSS12Q86WS5 348 aa12.37□□□□□ -0.43
TSPAN9-207ENST00000539631 GALNT15Q8N3T1 639 aa12.37□□□□□ -0.43
TSPAN9-207ENST00000539631 OR5K2Q8NHB8 316 aa12.37□□□□□ -0.43
TSPAN9-207ENST00000539631 ZFPM2Q8WW38 1151 aa12.37□□□□□ -0.43
TSPAN9-207ENST00000539631 NCSTNQ92542 709 aa12.37□□□□□ -0.43
TSPAN9-207ENST00000539631 RSC1A1Q92681 617 aa12.37□□□□□ -0.43
TSPAN9-207ENST00000539631 CNTNAP3BQ96NU0 1288 aa12.37□□□□□ -0.43
TSPAN9-207ENST00000539631 CYTH2Q99418 400 aa12.37□□□□□ -0.43
TSPAN9-207ENST00000539631 CNTNAP3Q9BZ76 1288 aa12.37□□□□□ -0.43
TSPAN9-207ENST00000539631 ZMYND15Q9H091 742 aa12.37□□□□□ -0.43
TSPAN9-207ENST00000539631 RRAGDQ9NQL2 400 aaPredicted RBP12.37□□□□□ -0.43
TSPAN9-207ENST00000539631 TMEM9Q9P0T7 183 aa12.37□□□□□ -0.43
TSPAN9-207ENST00000539631 KLK13Q9UKR3 277 aa12.37□□□□□ -0.43
TSPAN9-207ENST00000539631 PLAGL1Q9UM63 463 aa12.37□□□□□ -0.43
TSPAN9-207ENST00000539631 UNC13CQ8NB66 2214 aa12.37□□□□□ -0.43
TSPAN9-207ENST00000539631 A0A087WUV0 522 aaPredicted RBP12.36□□□□□ -0.43
TSPAN9-207ENST00000539631 CSO75390 466 aaKnown RBP12.36□□□□□ -0.43
TSPAN9-207ENST00000539631 MATN4O95460 622 aa12.36□□□□□ -0.43
TSPAN9-207ENST00000539631 C1orf105O95561 183 aa12.36□□□□□ -0.43
TSPAN9-207ENST00000539631 CPNE6O95741 557 aa12.36□□□□□ -0.43
TSPAN9-207ENST00000539631 TPBGLP0DKB5 382 aa12.36□□□□□ -0.43
TSPAN9-207ENST00000539631 CBSLP0DN79 551 aa12.36□□□□□ -0.43
TSPAN9-207ENST00000539631 MPSTP25325 297 aa12.36□□□□□ -0.43
TSPAN9-207ENST00000539631 SPRP35270 261 aaPredicted RBP12.36□□□□□ -0.43
TSPAN9-207ENST00000539631 CBSP35520 551 aa12.36□□□□□ -0.43
TSPAN9-207ENST00000539631 SKIV2L2P42285 1042 aaKnown RBP12.36□□□□□ -0.43
TSPAN9-207ENST00000539631 BDKRB1P46663 353 aa12.36□□□□□ -0.43
TSPAN9-207ENST00000539631 LIMK2P53671 638 aa12.36□□□□□ -0.43
TSPAN9-207ENST00000539631 TARDBPQ13148 414 aaKnown RBP eCLIP12.36□□□□□ -0.43
TSPAN9-207ENST00000539631 ZNF460Q14592 562 aa12.36□□□□□ -0.43
TSPAN9-207ENST00000539631 NAA30Q147X3 362 aaPredicted RBP12.36□□□□□ -0.43
TSPAN9-207ENST00000539631 UAP1Q16222 522 aaPredicted RBP12.36□□□□□ -0.43
TSPAN9-207ENST00000539631 CCSMST1Q4G0I0 132 aa12.36□□□□□ -0.43
TSPAN9-207ENST00000539631 TMEM207Q6UWW9 146 aa12.36□□□□□ -0.43
TSPAN9-207ENST00000539631 NEK10Q6ZWH5 1172 aa12.36□□□□□ -0.43
TSPAN9-207ENST00000539631 PIWIL4Q7Z3Z4 852 aaKnown RBP12.36□□□□□ -0.43
TSPAN9-207ENST00000539631 CEP97Q8IW35 865 aa12.36□□□□□ -0.43
TSPAN9-207ENST00000539631 DCBLD1Q8N8Z6 715 aa12.36□□□□□ -0.43
TSPAN9-207ENST00000539631 OR4E2Q8NGC2 313 aa12.36□□□□□ -0.43
TSPAN9-207ENST00000539631 EEF1AKMT1Q8WVE0 214 aa12.36□□□□□ -0.43
TSPAN9-207ENST00000539631 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.36□□□□□ -0.43
TSPAN9-207ENST00000539631 FOPNLQ96NB1 174 aa12.36□□□□□ -0.43
TSPAN9-207ENST00000539631 DEPDC7Q96QD5 511 aa12.36□□□□□ -0.43
TSPAN9-207ENST00000539631 GPR22Q99680 433 aa12.36□□□□□ -0.43
TSPAN9-207ENST00000539631 SCNM1Q9BWG6 230 aa12.36□□□□□ -0.43
TSPAN9-207ENST00000539631 EPB41L4BQ9H329 900 aa12.36□□□□□ -0.43
TSPAN9-207ENST00000539631 SEMA6CQ9H3T2 930 aa12.36□□□□□ -0.43
TSPAN9-207ENST00000539631 EPB41L1Q9H4G0 881 aa12.36□□□□□ -0.43
TSPAN9-207ENST00000539631 TFB2MQ9H5Q4 396 aaKnown RBP12.36□□□□□ -0.43
TSPAN9-207ENST00000539631 XKR8Q9H6D3 395 aa12.36□□□□□ -0.43
TSPAN9-207ENST00000539631 CAB39LQ9H9S4 337 aa12.36□□□□□ -0.43
TSPAN9-207ENST00000539631 CIDEBQ9UHD4 219 aa12.36□□□□□ -0.43
TSPAN9-207ENST00000539631 POLG2Q9UHN1 485 aa12.36□□□□□ -0.43
TSPAN9-207ENST00000539631 ICKQ9UPZ9 632 aa12.36□□□□□ -0.43
TSPAN9-207ENST00000539631 KRT87PA6NCN2 255 aa12.35□□□□□ -0.43
TSPAN9-207ENST00000539631 OR6C74A6NCV1 312 aa12.35□□□□□ -0.43
TSPAN9-207ENST00000539631 POC1B-GALNT4F8VUJ3 575 aa12.35□□□□□ -0.43
TSPAN9-207ENST00000539631 ABHD2P08910 425 aa12.35□□□□□ -0.43
TSPAN9-207ENST00000539631 ENO3P13929 434 aaPredicted RBP12.35□□□□□ -0.43
TSPAN9-207ENST00000539631 CAPZBP47756 277 aa12.35□□□□□ -0.43
TSPAN9-207ENST00000539631 RGS4P49798 205 aa12.35□□□□□ -0.43
TSPAN9-207ENST00000539631 GFERP55789 205 aa12.35□□□□□ -0.43
TSPAN9-207ENST00000539631 ILF2Q12905 390 aaKnown RBP12.35□□□□□ -0.43
TSPAN9-207ENST00000539631 GRB7Q14451 532 aa12.35□□□□□ -0.43
TSPAN9-207ENST00000539631 USP10Q14694 798 aaKnown RBP12.35□□□□□ -0.43
TSPAN9-207ENST00000539631 CLPPQ16740 277 aaPredicted RBP12.35□□□□□ -0.43
TSPAN9-207ENST00000539631 ISXQ2M1V0 245 aa12.35□□□□□ -0.43
TSPAN9-207ENST00000539631 WDR93Q6P2C0 686 aa12.35□□□□□ -0.43
TSPAN9-207ENST00000539631 TMEM71Q6P5X7 295 aa12.35□□□□□ -0.43
TSPAN9-207ENST00000539631 SLITRK4Q8IW52 837 aa12.35□□□□□ -0.43
TSPAN9-207ENST00000539631 DCUN1D3Q8IWE4 304 aa12.35□□□□□ -0.43
TSPAN9-207ENST00000539631 CACTIN-AS1Q8N1I8 211 aa12.35□□□□□ -0.43
TSPAN9-207ENST00000539631 LCN9Q8WX39 176 aa12.35□□□□□ -0.43
TSPAN9-207ENST00000539631 LINGO1Q96FE5 620 aa12.35□□□□□ -0.43
TSPAN9-207ENST00000539631 PARD6BQ9BYG5 372 aa12.35□□□□□ -0.43
TSPAN9-207ENST00000539631 SRMSQ9H3Y6 488 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms