RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 PPP1R42Q7Z4L9 355 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 ADCK2Q7Z695 626 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 TECPR1Q7Z6L1 1165 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 FAM72BQ86X60 149 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 CHERPQ8IWX8 916 aaKnown RBP1.01□□□□□ -2.25
HIF1A-204ENST00000539097 BEST3Q8N1M1 668 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 RYBPQ8N488 228 aaPredicted RBP1.01□□□□□ -2.25
HIF1A-204ENST00000539097 ZCCHC9Q8N567 271 aaKnown RBP1.01□□□□□ -2.25
HIF1A-204ENST00000539097 MGARPQ8TDB4 240 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 ST6GALNAC6Q969X2 333 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 CDHR1Q96JP9 859 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 MARK4Q96L34 752 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 ZNF570Q96NI8 536 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 TSSK2Q96PF2 358 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 DUX3Q96PT4 197 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 CDRT15Q96T59 188 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 SPXQ9BT56 116 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 ABHD6Q9BV23 337 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 MID1IP1Q9NPA3 183 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 POU2F3Q9UKI9 436 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 PCDHA12Q9UN75 941 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 CMAHPQ9Y471 501 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 ZSCAN21Q9Y5A6 473 aaPredicted RBP1.01□□□□□ -2.25
HIF1A-204ENST00000539097 PCDHGA5Q9Y5G8 931 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 PCDHGA1Q9Y5H4 931 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 INSL5Q9Y5Q6 135 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 STON1Q9Y6Q2 735 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 SOS1Q07889 1333 aaPredicted RBP1.01□□□□□ -2.25
HIF1A-204ENST00000539097 CGNL1Q0VF96 1302 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 TAF1P21675 1872 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 COL22A1Q8NFW1 1626 aaPredicted RBP1.01□□□□□ -2.25
HIF1A-204ENST00000539097 STRCQ7RTU9 1775 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 LY6G6EA0A0G2JKS1 128 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 TMEM272A0A1B0GTI8 110 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 A0A1B0GUV1 79 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 LRRD1A4D1F6 860 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 KCNU1A8MYU2 1149 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 KLF11O14901 512 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 CLGNO14967 610 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 ST8SIA3O43173 380 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 SYNGR3O43761 229 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 ZNF217O75362 1048 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 EPN2O95208 641 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 PENKP01210 267 aaPredicted RBP1.01□□□□□ -2.25
HIF1A-204ENST00000539097 IGLV2-14P01704 120 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 LCATP04180 440 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 RB1P06400 928 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 ABCB1P08183 1280 aaPredicted RBP1.01□□□□□ -2.25
HIF1A-204ENST00000539097 ZCCHC18P0CG32 403 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 CT45A8P0DMV1 189 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 CT45A9P0DMV2 189 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 GZMAP12544 262 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 ATP5F1P24539 256 aaPredicted RBP1.01□□□□□ -2.25
HIF1A-204ENST00000539097 POU1F1P28069 291 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 HTR2AP28223 471 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 GABRA5P31644 462 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 APOBEC1P41238 236 aaKnown RBP1.01□□□□□ -2.25
HIF1A-204ENST00000539097 CLCN4P51793 760 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 STAT2P52630 851 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 P2RX3P56373 397 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 ASIC1P78348 528 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 AIMP1Q12904 312 aaKnown RBP1.01□□□□□ -2.25
HIF1A-204ENST00000539097 CUL3Q13618 768 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 SNTB1Q13884 538 aaKnown RBP1.01□□□□□ -2.25
HIF1A-204ENST00000539097 ZNF234Q14588 700 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 CT45A2Q5DJT8 189 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 GLRA4Q5JXX5 417 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 PLPP4Q5VZY2 271 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 ISLR2Q6UXK2 745 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 TMEM184AQ6ZMB5 413 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 C1orf186Q6ZWK4 172 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 PIWIL3Q7Z3Z3 882 aaKnown RBP1.01□□□□□ -2.25
HIF1A-204ENST00000539097 VSIG1Q86XK7 387 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 APCDD1Q8J025 514 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 CPSF7Q8N684 471 aaKnown RBP1.01□□□□□ -2.25
HIF1A-204ENST00000539097 TC2NQ8N9U0 490 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 OR8H1Q8NGG4 311 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 WDR20Q8TBZ3 569 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 DNASE1L2Q92874 299 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 EXOC4Q96A65 974 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 MRPL38Q96DV4 380 aaKnown RBP1.01□□□□□ -2.25
HIF1A-204ENST00000539097 CALML4Q96GE6 196 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 URB1-AS1Q96HZ7 61 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 ACOX2Q99424 681 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 NAP1L3Q99457 506 aaPredicted RBP1.01□□□□□ -2.25
HIF1A-204ENST00000539097 FICDQ9BVA6 458 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 SPRTNQ9H040 489 aaPredicted RBP1.01□□□□□ -2.25
HIF1A-204ENST00000539097 SLA2Q9H6Q3 261 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 CNOT10Q9H9A5 744 aaKnown RBP1.01□□□□□ -2.25
HIF1A-204ENST00000539097 EPB41L5Q9HCM4 733 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 MYNNQ9NPC7 610 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 NRIP3Q9NQ35 241 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 PHPT1Q9NRX4 125 aaPredicted RBP1.01□□□□□ -2.25
HIF1A-204ENST00000539097 ADPRHL2Q9NX46 363 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 CPSF2Q9P2I0 782 aaKnown RBP1.01□□□□□ -2.25
HIF1A-204ENST00000539097 LRWD1Q9UFC0 647 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 IL19Q9UHD0 177 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 TEKT2Q9UIF3 430 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 FBXL4Q9UKA2 621 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 APPL1Q9UKG1 709 aa1.01□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms