RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 TCFL5Q9UL49 500 aa12.13□□□□□ -0.47
VAMP1-206ENST00000538970 GRID2IPA4D2P6 1211 aa12.12□□□□□ -0.47
VAMP1-206ENST00000538970 C2orf74A8MZ97 194 aa12.12□□□□□ -0.47
VAMP1-206ENST00000538970 SORBS2O94875 1100 aaKnown RBP12.12□□□□□ -0.47
VAMP1-206ENST00000538970 TMEM63AO94886 807 aa12.12□□□□□ -0.47
VAMP1-206ENST00000538970 IPO7O95373 1038 aaKnown RBP12.12□□□□□ -0.47
VAMP1-206ENST00000538970 METTL18O95568 372 aa12.12□□□□□ -0.47
VAMP1-206ENST00000538970 GSTM1P09488 218 aa12.12□□□□□ -0.47
VAMP1-206ENST00000538970 PVRP15151 417 aa12.12□□□□□ -0.47
VAMP1-206ENST00000538970 TPH1P17752 444 aa12.12□□□□□ -0.47
VAMP1-206ENST00000538970 POU3F2P20265 443 aaPredicted RBP12.12□□□□□ -0.47
VAMP1-206ENST00000538970 CETN2P41208 172 aa12.12□□□□□ -0.47
VAMP1-206ENST00000538970 UQCRFS1P47985 274 aa12.12□□□□□ -0.47
VAMP1-206ENST00000538970 CCL11P51671 97 aa12.12□□□□□ -0.47
VAMP1-206ENST00000538970 NAP1L1P55209 391 aaKnown RBP12.12□□□□□ -0.47
VAMP1-206ENST00000538970 GSTM4Q03013 218 aa12.12□□□□□ -0.47
VAMP1-206ENST00000538970 CACNG1Q06432 222 aa12.12□□□□□ -0.47
VAMP1-206ENST00000538970 POU6F1Q14863 301 aa12.12□□□□□ -0.47
VAMP1-206ENST00000538970 DBN1Q16643 649 aa12.12□□□□□ -0.47
VAMP1-206ENST00000538970 PARP6Q2NL67 630 aa12.12□□□□□ -0.47
VAMP1-206ENST00000538970 PTCHD3Q3KNS1 767 aa12.12□□□□□ -0.47
VAMP1-206ENST00000538970 NADK2Q4G0N4 442 aa12.12□□□□□ -0.47
VAMP1-206ENST00000538970 CDHR3Q6ZTQ4 885 aa12.12□□□□□ -0.47
VAMP1-206ENST00000538970 TAS2R42Q7RTR8 314 aa12.12□□□□□ -0.47
VAMP1-206ENST00000538970 TMTC1Q8IUR5 882 aa12.12□□□□□ -0.47
VAMP1-206ENST00000538970 ADGRF3Q8IZF5 1079 aa12.12□□□□□ -0.47
VAMP1-206ENST00000538970 FAM71DQ8N9W8 422 aa12.12□□□□□ -0.47
VAMP1-206ENST00000538970 TFGQ92734 400 aaPredicted RBP12.12□□□□□ -0.47
VAMP1-206ENST00000538970 KLHL25Q9H0H3 589 aa12.12□□□□□ -0.47
VAMP1-206ENST00000538970 XKR8Q9H6D3 395 aa12.12□□□□□ -0.47
VAMP1-206ENST00000538970 ACTR10Q9NZ32 417 aa12.12□□□□□ -0.47
VAMP1-206ENST00000538970 ICKQ9UPZ9 632 aa12.12□□□□□ -0.47
VAMP1-206ENST00000538970 FBN2P35556 2912 aa12.12□□□□□ -0.47
VAMP1-206ENST00000538970 CREBBPQ92793 2442 aa12.11□□□□□ -0.47
VAMP1-206ENST00000538970 ITPR2Q14571 2701 aa12.11□□□□□ -0.47
VAMP1-206ENST00000538970 TTLL8A6PVC2 850 aa12.11□□□□□ -0.47
VAMP1-206ENST00000538970 E7EQ34 232 aa12.11□□□□□ -0.47
VAMP1-206ENST00000538970 LIN7AO14910 233 aaPredicted RBP12.11□□□□□ -0.47
VAMP1-206ENST00000538970 MAP3K7O43318 606 aa12.11□□□□□ -0.47
VAMP1-206ENST00000538970 AP2A2O94973 939 aa12.11□□□□□ -0.47
VAMP1-206ENST00000538970 PSMA3P25788 255 aa12.11□□□□□ -0.47
VAMP1-206ENST00000538970 VAV2P52735 878 aa12.11□□□□□ -0.47
VAMP1-206ENST00000538970 GDF10P55107 478 aa12.11□□□□□ -0.47
VAMP1-206ENST00000538970 ITGA1P56199 1179 aa12.11□□□□□ -0.47
VAMP1-206ENST00000538970 PRKG2Q13237 762 aa12.11□□□□□ -0.47
VAMP1-206ENST00000538970 KLF1Q13351 362 aaPredicted RBP12.11□□□□□ -0.47
VAMP1-206ENST00000538970 NCF4Q15080 339 aa12.11□□□□□ -0.47
VAMP1-206ENST00000538970 P3H1Q32P28 736 aa12.11□□□□□ -0.47
VAMP1-206ENST00000538970 ZNF385CQ66K41 422 aaPredicted RBP12.11□□□□□ -0.47
VAMP1-206ENST00000538970 ZNF449Q6P9G9 518 aa12.11□□□□□ -0.47
VAMP1-206ENST00000538970 SPESP1Q6UW49 350 aa12.11□□□□□ -0.47
VAMP1-206ENST00000538970 RAD9BQ6WBX8 426 aa12.11□□□□□ -0.47
VAMP1-206ENST00000538970 ZBTB2Q8N680 514 aa12.11□□□□□ -0.47
VAMP1-206ENST00000538970 EFCAB3Q8N7B9 438 aa12.11□□□□□ -0.47
VAMP1-206ENST00000538970 C19orf47Q8N9M1 422 aaKnown RBP12.11□□□□□ -0.47
VAMP1-206ENST00000538970 TTC13Q8NBP0 860 aa12.11□□□□□ -0.47
VAMP1-206ENST00000538970 GALNT11Q8NCW6 608 aa12.11□□□□□ -0.47
VAMP1-206ENST00000538970 ACRBPQ8NEB7 543 aa12.11□□□□□ -0.47
VAMP1-206ENST00000538970 OR5AR1Q8NGP9 310 aa12.11□□□□□ -0.47
VAMP1-206ENST00000538970 CPT1CQ8TCG5 803 aa12.11□□□□□ -0.47
VAMP1-206ENST00000538970 STYXQ8WUJ0 223 aa12.11□□□□□ -0.47
VAMP1-206ENST00000538970 CDKN2AIPNLQ96HQ2 116 aa12.11□□□□□ -0.47
VAMP1-206ENST00000538970 DPH2Q9BQC3 489 aaPredicted RBP12.11□□□□□ -0.47
VAMP1-206ENST00000538970 PIH1D1Q9NWS0 290 aaKnown RBP12.11□□□□□ -0.47
VAMP1-206ENST00000538970 SERTAD3Q9UJW9 196 aa12.11□□□□□ -0.47
VAMP1-206ENST00000538970 PCDHGB7Q9Y5F8 929 aa12.11□□□□□ -0.47
VAMP1-206ENST00000538970 PRSS21Q9Y6M0 314 aa12.11□□□□□ -0.47
VAMP1-206ENST00000538970 LRBAP50851 2863 aa12.1□□□□□ -0.47
VAMP1-206ENST00000538970 GOLGA6L9A6NEM1 432 aa12.1□□□□□ -0.47
VAMP1-206ENST00000538970 MROH6A6NGR9 719 aa12.1□□□□□ -0.47
VAMP1-206ENST00000538970 H3BMH7 237 aa12.1□□□□□ -0.47
VAMP1-206ENST00000538970 ZNF749O43361 778 aa12.1□□□□□ -0.47
VAMP1-206ENST00000538970 VPS4BO75351 444 aa12.1□□□□□ -0.47
VAMP1-206ENST00000538970 AP2A1O95782 977 aa12.1□□□□□ -0.47
VAMP1-206ENST00000538970 RNF224P0DH78 156 aa12.1□□□□□ -0.47
VAMP1-206ENST00000538970 UGT2B7P16662 529 aa12.1□□□□□ -0.47
VAMP1-206ENST00000538970 GNLYP22749 145 aa12.1□□□□□ -0.47
VAMP1-206ENST00000538970 SHMT2P34897 504 aa12.1□□□□□ -0.47
VAMP1-206ENST00000538970 NSG1P42857 185 aa12.1□□□□□ -0.47
VAMP1-206ENST00000538970 ZNF75DP51815 510 aa12.1□□□□□ -0.47
VAMP1-206ENST00000538970 ITIH4Q14624 930 aa12.1□□□□□ -0.47
VAMP1-206ENST00000538970 PACS1Q6VY07 963 aa12.1□□□□□ -0.47
VAMP1-206ENST00000538970 MED25Q71SY5 747 aa12.1□□□□□ -0.47
VAMP1-206ENST00000538970 TRIM73Q86UV7 250 aa12.1□□□□□ -0.47
VAMP1-206ENST00000538970 FDCSPQ8NFU4 85 aa12.1□□□□□ -0.47
VAMP1-206ENST00000538970 SLC35B2Q8TB61 432 aa12.1□□□□□ -0.47
VAMP1-206ENST00000538970 MRFAP1L1Q96HT8 127 aa12.1□□□□□ -0.47
VAMP1-206ENST00000538970 NUDT9Q9BW91 350 aa12.1□□□□□ -0.47
VAMP1-206ENST00000538970 SLC7A5P2Q9GIP4 190 aa12.1□□□□□ -0.47
VAMP1-206ENST00000538970 FAM60AQ9NP50 221 aa12.1□□□□□ -0.47
VAMP1-206ENST00000538970 SMARCAL1Q9NZC9 954 aa12.1□□□□□ -0.47
VAMP1-206ENST00000538970 VPS4AQ9UN37 437 aa12.1□□□□□ -0.47
VAMP1-206ENST00000538970 PACSIN2Q9UNF0 486 aaPredicted RBP12.1□□□□□ -0.47
VAMP1-206ENST00000538970 R3HDM2Q9Y2K5 976 aaKnown RBP12.1□□□□□ -0.47
VAMP1-206ENST00000538970 ZNF451Q9Y4E5 1061 aa12.1□□□□□ -0.47
VAMP1-206ENST00000538970 MAP4K5Q9Y4K4 846 aa12.1□□□□□ -0.47
VAMP1-206ENST00000538970 PCSK5Q92824 1860 aa12.1□□□□□ -0.47
VAMP1-206ENST00000538970 ICE1Q9Y2F5 2266 aa12.09□□□□□ -0.47
VAMP1-206ENST00000538970 TNRC6AQ8NDV7 1962 aaKnown RBP12.09□□□□□ -0.47
VAMP1-206ENST00000538970 CCDC78A2IDD5 438 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms