RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 CYS1Q717R9 158 aa12.73□□□□□ -0.37
CHFR-216ENST00000538235 SLC26A11Q86WA9 606 aa12.73□□□□□ -0.37
CHFR-216ENST00000538235 TRIM48Q8IWZ4 208 aa12.73□□□□□ -0.37
CHFR-216ENST00000538235 IFT20Q8IY31 132 aa12.73□□□□□ -0.37
CHFR-216ENST00000538235 PPM1NQ8N819 430 aa12.73□□□□□ -0.37
CHFR-216ENST00000538235 GPATCH11Q8N954 259 aa12.73□□□□□ -0.37
CHFR-216ENST00000538235 LINC01555Q8NAE3 123 aa12.73□□□□□ -0.37
CHFR-216ENST00000538235 RCBTB1Q8NDN9 531 aa12.73□□□□□ -0.37
CHFR-216ENST00000538235 TMEM159Q96B96 161 aa12.73□□□□□ -0.37
CHFR-216ENST00000538235 PRR11Q96HE9 360 aaPredicted RBP12.73□□□□□ -0.37
CHFR-216ENST00000538235 PANX3Q96QZ0 392 aa12.73□□□□□ -0.37
CHFR-216ENST00000538235 TTC1Q99614 292 aa12.73□□□□□ -0.37
CHFR-216ENST00000538235 SLC38A3Q99624 504 aa12.73□□□□□ -0.37
CHFR-216ENST00000538235 RHOJQ9H4E5 214 aa12.73□□□□□ -0.37
CHFR-216ENST00000538235 UCK1Q9HA47 277 aa12.73□□□□□ -0.37
CHFR-216ENST00000538235 SPHK1Q9NYA1 384 aa12.73□□□□□ -0.37
CHFR-216ENST00000538235 MTRF1LQ9UGC7 380 aaKnown RBP12.73□□□□□ -0.37
CHFR-216ENST00000538235 ZFHX4Q86UP3 3567 aa12.72□□□□□ -0.37
CHFR-216ENST00000538235 IGHV5-10-1A0A0J9YXX1 117 aa12.72□□□□□ -0.37
CHFR-216ENST00000538235 FAM221BA6H8Z2 402 aa12.72□□□□□ -0.37
CHFR-216ENST00000538235 KLHL33A6NCF5 533 aa12.72□□□□□ -0.37
CHFR-216ENST00000538235 BTN3A1O00481 513 aa12.72□□□□□ -0.37
CHFR-216ENST00000538235 PHGDHO43175 533 aaKnown RBP12.72□□□□□ -0.37
CHFR-216ENST00000538235 C1orf105O95561 183 aa12.72□□□□□ -0.37
CHFR-216ENST00000538235 APOA4P06727 396 aa12.72□□□□□ -0.37
CHFR-216ENST00000538235 GSTA2P09210 222 aa12.72□□□□□ -0.37
CHFR-216ENST00000538235 THRAP10827 490 aa12.72□□□□□ -0.37
CHFR-216ENST00000538235 HGFP14210 728 aa12.72□□□□□ -0.37
CHFR-216ENST00000538235 SLC2A4P14672 509 aa12.72□□□□□ -0.37
CHFR-216ENST00000538235 PPARGP37231 505 aaPredicted RBP12.72□□□□□ -0.37
CHFR-216ENST00000538235 ETV5P41161 510 aa12.72□□□□□ -0.37
CHFR-216ENST00000538235 GPR3P46089 330 aa12.72□□□□□ -0.37
CHFR-216ENST00000538235 CAPZBP47756 277 aa12.72□□□□□ -0.37
CHFR-216ENST00000538235 LIMK2P53671 638 aa12.72□□□□□ -0.37
CHFR-216ENST00000538235 EPHA4P54764 986 aa12.72□□□□□ -0.37
CHFR-216ENST00000538235 YBX1P67809 324 aaKnown RBP12.72□□□□□ -0.37
CHFR-216ENST00000538235 SPIDRQ14159 915 aa12.72□□□□□ -0.37
CHFR-216ENST00000538235 ZNF449Q6P9G9 518 aa12.72□□□□□ -0.37
CHFR-216ENST00000538235 MBOAT1Q6ZNC8 495 aa12.72□□□□□ -0.37
CHFR-216ENST00000538235 OTOAQ7RTW8 1153 aa12.72□□□□□ -0.37
CHFR-216ENST00000538235 CMC1Q7Z7K0 106 aa12.72□□□□□ -0.37
CHFR-216ENST00000538235 FAM20CQ8IXL6 584 aa12.72□□□□□ -0.37
CHFR-216ENST00000538235 ADGRF3Q8IZF5 1079 aa12.72□□□□□ -0.37
CHFR-216ENST00000538235 OR6C4Q8NGE1 309 aa12.72□□□□□ -0.37
CHFR-216ENST00000538235 OR5K2Q8NHB8 316 aa12.72□□□□□ -0.37
CHFR-216ENST00000538235 CFAP61Q8NHU2 1237 aa12.72□□□□□ -0.37
CHFR-216ENST00000538235 EEF1AKMT1Q8WVE0 214 aa12.72□□□□□ -0.37
CHFR-216ENST00000538235 ASZ1Q8WWH4 475 aa12.72□□□□□ -0.37
CHFR-216ENST00000538235 MRRFQ96E11 262 aaKnown RBP12.72□□□□□ -0.37
CHFR-216ENST00000538235 ELMO2Q96JJ3 720 aa12.72□□□□□ -0.37
CHFR-216ENST00000538235 CCDC74BQ96LY2 380 aa12.72□□□□□ -0.37
CHFR-216ENST00000538235 FERD3LQ96RJ6 166 aa12.72□□□□□ -0.37
CHFR-216ENST00000538235 GFM1Q96RP9 751 aaKnown RBP12.72□□□□□ -0.37
CHFR-216ENST00000538235 GPR22Q99680 433 aa12.72□□□□□ -0.37
CHFR-216ENST00000538235 UNKQ9C0B0 810 aaKnown RBP12.72□□□□□ -0.37
CHFR-216ENST00000538235 ABCG4Q9H172 646 aa12.72□□□□□ -0.37
CHFR-216ENST00000538235 CLCA2Q9UQC9 943 aa12.72□□□□□ -0.37
CHFR-216ENST00000538235 ASF1AQ9Y294 204 aa12.72□□□□□ -0.37
CHFR-216ENST00000538235 CELSR3Q9NYQ7 3312 aa12.72□□□□□ -0.37
CHFR-216ENST00000538235 RIPK2O43353 540 aa12.71□□□□□ -0.37
CHFR-216ENST00000538235 NRP2O60462 931 aa12.71□□□□□ -0.37
CHFR-216ENST00000538235 UBXN7O94888 489 aa12.71□□□□□ -0.37
CHFR-216ENST00000538235 C9P02748 559 aa12.71□□□□□ -0.37
CHFR-216ENST00000538235 SHBGP04278 402 aa12.71□□□□□ -0.37
CHFR-216ENST00000538235 CAPNS1P04632 268 aa12.71□□□□□ -0.37
CHFR-216ENST00000538235 PROS1P07225 676 aa12.71□□□□□ -0.37
CHFR-216ENST00000538235 ZNF37AP17032 561 aaPredicted RBP12.71□□□□□ -0.37
CHFR-216ENST00000538235 ATP5DP30049 168 aa12.71□□□□□ -0.37
CHFR-216ENST00000538235 PKLRP30613 574 aa12.71□□□□□ -0.37
CHFR-216ENST00000538235 STX2P32856 288 aa12.71□□□□□ -0.37
CHFR-216ENST00000538235 GP5P40197 560 aa12.71□□□□□ -0.37
CHFR-216ENST00000538235 KPNA2P52292 529 aaKnown RBP12.71□□□□□ -0.37
CHFR-216ENST00000538235 E2F1Q01094 437 aa12.71□□□□□ -0.37
CHFR-216ENST00000538235 DLG1Q12959 904 aa12.71□□□□□ -0.37
CHFR-216ENST00000538235 SQSTM1Q13501 440 aa12.71□□□□□ -0.37
CHFR-216ENST00000538235 ZKSCAN8Q15776 578 aaPredicted RBP12.71□□□□□ -0.37
CHFR-216ENST00000538235 PHKG1Q16816 387 aa12.71□□□□□ -0.37
CHFR-216ENST00000538235 MAP9Q49MG5 647 aa12.71□□□□□ -0.37
CHFR-216ENST00000538235 FAM45BPQ6NSW5 357 aa12.71□□□□□ -0.37
CHFR-216ENST00000538235 CCNI2Q6ZMN8 369 aaPredicted RBP12.71□□□□□ -0.37
CHFR-216ENST00000538235 RBM44Q6ZP01 1051 aaKnown RBP12.71□□□□□ -0.37
CHFR-216ENST00000538235 CTAGE3PQ8IX95 158 aa12.71□□□□□ -0.37
CHFR-216ENST00000538235 FAM45AQ8TCE6 357 aa12.71□□□□□ -0.37
CHFR-216ENST00000538235 AENQ8WTP8 325 aaKnown RBP12.71□□□□□ -0.37
CHFR-216ENST00000538235 DCAKDQ8WVC6 231 aa12.71□□□□□ -0.37
CHFR-216ENST00000538235 GATA6Q92908 595 aa12.71□□□□□ -0.37
CHFR-216ENST00000538235 RNF31Q96EP0 1072 aa12.71□□□□□ -0.37
CHFR-216ENST00000538235 DHRS4Q9BTZ2 278 aa12.71□□□□□ -0.37
CHFR-216ENST00000538235 PDP2Q9P2J9 529 aa12.71□□□□□ -0.37
CHFR-216ENST00000538235 KLHL3Q9UH77 587 aa12.71□□□□□ -0.37
CHFR-216ENST00000538235 VPS9D1Q9Y2B5 631 aa12.71□□□□□ -0.37
CHFR-216ENST00000538235 A0A1W2PPV9 198 aa12.7□□□□□ -0.38
CHFR-216ENST00000538235 OR6C74A6NCV1 312 aa12.7□□□□□ -0.38
CHFR-216ENST00000538235 OR5K3A6NET4 321 aa12.7□□□□□ -0.38
CHFR-216ENST00000538235 FOXO6A8MYZ6 492 aa12.7□□□□□ -0.38
CHFR-216ENST00000538235 E5RI56 91 aa12.7□□□□□ -0.38
CHFR-216ENST00000538235 PRAMEF10O60809 474 aa12.7□□□□□ -0.38
CHFR-216ENST00000538235 VPS26AO75436 327 aa12.7□□□□□ -0.38
CHFR-216ENST00000538235 PSIP1O75475 530 aaKnown RBP12.7□□□□□ -0.38
CHFR-216ENST00000538235 CPNE6O95741 557 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms