RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 SMSP52788 366 aa10.5□□□□□ -0.73
RTN3-208ENST00000537981 TEKQ02763 1124 aa10.5□□□□□ -0.73
RTN3-208ENST00000537981 RAB33AQ14088 237 aa10.5□□□□□ -0.73
RTN3-208ENST00000537981 FAM83EQ2M2I3 478 aa10.5□□□□□ -0.73
RTN3-208ENST00000537981 SETMARQ53H47 684 aaPredicted RBP10.5□□□□□ -0.73
RTN3-208ENST00000537981 SPANXN2Q5MJ10 180 aa10.5□□□□□ -0.73
RTN3-208ENST00000537981 FAM183BPQ6ZVS7 135 aa10.5□□□□□ -0.73
RTN3-208ENST00000537981 DGLUCYQ7Z3D6 616 aa10.5□□□□□ -0.73
RTN3-208ENST00000537981 PRSS42Q7Z5A4 293 aa10.5□□□□□ -0.73
RTN3-208ENST00000537981 PJA1Q8NG27 643 aa10.5□□□□□ -0.73
RTN3-208ENST00000537981 AFG1LQ8WV93 481 aa10.5□□□□□ -0.73
RTN3-208ENST00000537981 RADILQ96JH8 1075 aa10.5□□□□□ -0.73
RTN3-208ENST00000537981 QKIQ96PU8 341 aaKnown RBP eCLIP10.5□□□□□ -0.731e-6■■■□□ 15.5
RTN3-208ENST00000537981 BCL7BQ9BQE9 202 aa10.5□□□□□ -0.73
RTN3-208ENST00000537981 RNF6Q9Y252 685 aa10.5□□□□□ -0.73
RTN3-208ENST00000537981 ANKRD6Q9Y2G4 727 aa10.5□□□□□ -0.73
RTN3-208ENST00000537981 A0A0A0MRY4 1105 aa10.49□□□□□ -0.73
RTN3-208ENST00000537981 A8MT66 165 aa10.49□□□□□ -0.73
RTN3-208ENST00000537981 B4DXG7 233 aa10.49□□□□□ -0.73
RTN3-208ENST00000537981 ZNF623O75123 536 aa10.49□□□□□ -0.73
RTN3-208ENST00000537981 CDK14O94921 469 aa10.49□□□□□ -0.73
RTN3-208ENST00000537981 CST1P01037 141 aa10.49□□□□□ -0.73
RTN3-208ENST00000537981 ATF6P18850 670 aa10.49□□□□□ -0.73
RTN3-208ENST00000537981 BTF3P20290 206 aaKnown RBP10.49□□□□□ -0.73
RTN3-208ENST00000537981 GPD1P21695 349 aa10.49□□□□□ -0.73
RTN3-208ENST00000537981 KELP23276 732 aa10.49□□□□□ -0.73
RTN3-208ENST00000537981 SSTR4P31391 388 aa10.49□□□□□ -0.73
RTN3-208ENST00000537981 SDC4P31431 198 aa10.49□□□□□ -0.73
RTN3-208ENST00000537981 UGT2B10P36537 528 aa10.49□□□□□ -0.73
RTN3-208ENST00000537981 MAGEA11P43364 429 aa10.49□□□□□ -0.73
RTN3-208ENST00000537981 KCNC1P48547 511 aa10.49□□□□□ -0.73
RTN3-208ENST00000537981 NRIP1P48552 1158 aa10.49□□□□□ -0.73
RTN3-208ENST00000537981 ETV1P50549 477 aa10.49□□□□□ -0.73
RTN3-208ENST00000537981 CYP4F2P78329 520 aa10.49□□□□□ -0.73
RTN3-208ENST00000537981 CYP4F3Q08477 520 aa10.49□□□□□ -0.73
RTN3-208ENST00000537981 CSHL1Q14406 222 aa10.49□□□□□ -0.73
RTN3-208ENST00000537981 TUSC1Q2TAM9 212 aa10.49□□□□□ -0.73
RTN3-208ENST00000537981 ZNF648Q5T619 568 aaPredicted RBP10.49□□□□□ -0.73
RTN3-208ENST00000537981 LURAP1LQ8IV03 231 aa10.49□□□□□ -0.73
RTN3-208ENST00000537981 CCDC71Q8IV32 467 aaPredicted RBP10.49□□□□□ -0.73
RTN3-208ENST00000537981 CDKL3Q8IVW4 592 aaPredicted RBP10.49□□□□□ -0.73
RTN3-208ENST00000537981 GPR151Q8TDV0 419 aa10.49□□□□□ -0.73
RTN3-208ENST00000537981 TMCO6Q96DC7 493 aa10.49□□□□□ -0.73
RTN3-208ENST00000537981 C19orf60Q96EN9 201 aa10.49□□□□□ -0.73
RTN3-208ENST00000537981 SIPA1Q96FS4 1042 aa10.49□□□□□ -0.73
RTN3-208ENST00000537981 KLHL15Q96M94 604 aa10.49□□□□□ -0.73
RTN3-208ENST00000537981 SPATA13Q96N96 652 aa10.49□□□□□ -0.73
RTN3-208ENST00000537981 MCCC1Q96RQ3 725 aaPredicted RBP10.49□□□□□ -0.73
RTN3-208ENST00000537981 GPR22Q99680 433 aa10.49□□□□□ -0.73
RTN3-208ENST00000537981 SORBS1Q9BX66 1292 aaKnown RBP10.49□□□□□ -0.73
RTN3-208ENST00000537981 RIBC2Q9H4K1 309 aa10.49□□□□□ -0.73
RTN3-208ENST00000537981 FANCFQ9NPI8 374 aa10.49□□□□□ -0.73
RTN3-208ENST00000537981 OGDHLQ9ULD0 1010 aa10.49□□□□□ -0.73
RTN3-208ENST00000537981 GRIP1Q9Y3R0 1128 aa10.49□□□□□ -0.73
RTN3-208ENST00000537981 KCNE2Q9Y6J6 123 aa10.49□□□□□ -0.73
RTN3-208ENST00000537981 HSPE1-MOB4S4R3N1 261 aa10.49□□□□□ -0.73
RTN3-208ENST00000537981 MFSD11O43934 449 aa10.49□□□□□ -0.73
RTN3-208ENST00000537981 PMPCBO75439 489 aa10.49□□□□□ -0.73
RTN3-208ENST00000537981 DNAJB5O75953 348 aa10.49□□□□□ -0.73
RTN3-208ENST00000537981 GOT1P17174 413 aa10.49□□□□□ -0.73
RTN3-208ENST00000537981 ITGALP20701 1170 aa10.49□□□□□ -0.73
RTN3-208ENST00000537981 MYL9P24844 172 aa10.49□□□□□ -0.73
RTN3-208ENST00000537981 TNFSF8P32971 234 aa10.49□□□□□ -0.73
RTN3-208ENST00000537981 ASPAP45381 313 aa10.49□□□□□ -0.73
RTN3-208ENST00000537981 ZFP36L2P47974 494 aaKnown RBP10.49□□□□□ -0.73
RTN3-208ENST00000537981 SNRPFP62306 86 aaKnown RBP10.49□□□□□ -0.73
RTN3-208ENST00000537981 SP2Q02086 613 aa10.49□□□□□ -0.73
RTN3-208ENST00000537981 TNK1Q13470 666 aa10.49□□□□□ -0.73
RTN3-208ENST00000537981 MLC1Q15049 377 aa10.49□□□□□ -0.73
RTN3-208ENST00000537981 ZBTB37Q5TC79 503 aa10.49□□□□□ -0.73
RTN3-208ENST00000537981 GARNL3Q5VVW2 1013 aa10.49□□□□□ -0.73
RTN3-208ENST00000537981 NCBP2-AS2Q69YL0 99 aa10.49□□□□□ -0.73
RTN3-208ENST00000537981 CYP4Z1Q86W10 505 aa10.49□□□□□ -0.73
RTN3-208ENST00000537981 FAM217AQ8IXS0 508 aa10.49□□□□□ -0.73
RTN3-208ENST00000537981 AKAP1Q92667 903 aaKnown RBP eCLIP10.49□□□□□ -0.733e-8■■■■□ 20.2
RTN3-208ENST00000537981 P2RY11Q96G91 374 aa10.49□□□□□ -0.73
RTN3-208ENST00000537981 TBCDQ9BTW9 1192 aa10.49□□□□□ -0.73
RTN3-208ENST00000537981 C11orf54Q9H0W9 315 aaPredicted RBP10.49□□□□□ -0.73
RTN3-208ENST00000537981 TAS2R16Q9NYV7 291 aa10.49□□□□□ -0.73
RTN3-208ENST00000537981 TRMT6Q9UJA5 497 aaKnown RBP10.49□□□□□ -0.73
RTN3-208ENST00000537981 DNAJC15Q9Y5T4 150 aa10.49□□□□□ -0.73
RTN3-208ENST00000537981 NUP214P35658 2090 aaPredicted RBP10.48□□□□□ -0.73
RTN3-208ENST00000537981 CLDN24A6NM45 220 aa10.48□□□□□ -0.73
RTN3-208ENST00000537981 BTN3A3O00478 584 aa10.48□□□□□ -0.73
RTN3-208ENST00000537981 BET1O15155 118 aa10.48□□□□□ -0.73
RTN3-208ENST00000537981 NPHS1O60500 1241 aa10.48□□□□□ -0.73
RTN3-208ENST00000537981 SLC22A5O76082 557 aa10.48□□□□□ -0.73
RTN3-208ENST00000537981 ALDH1A1P00352 501 aa10.48□□□□□ -0.73
RTN3-208ENST00000537981 EGFRP00533 1210 aa10.48□□□□□ -0.73
RTN3-208ENST00000537981 ERP29P30040 261 aaKnown RBP10.48□□□□□ -0.73
RTN3-208ENST00000537981 HNF4AP41235 474 aa10.48□□□□□ -0.73
RTN3-208ENST00000537981 KIR2DL3P43628 341 aa10.48□□□□□ -0.73
RTN3-208ENST00000537981 BRCC3P46736 316 aa10.48□□□□□ -0.73
RTN3-208ENST00000537981 HAAOP46952 286 aa10.48□□□□□ -0.73
RTN3-208ENST00000537981 SRP54P61011 504 aaKnown RBP10.48□□□□□ -0.73
RTN3-208ENST00000537981 YWHAEP62258 255 aaKnown RBP10.48□□□□□ -0.73
RTN3-208ENST00000537981 SP4Q02446 784 aa10.48□□□□□ -0.73
RTN3-208ENST00000537981 AANATQ16613 207 aa10.48□□□□□ -0.73
RTN3-208ENST00000537981 DDR2Q16832 855 aa10.48□□□□□ -0.73
RTN3-208ENST00000537981 HABP4Q5JVS0 413 aaKnown RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms