RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 CXXC1Q9P0U4 656 aaPredicted RBP9.11□□□□□ -0.95
UBE3B-207ENST00000537063 PADI4Q9UM07 663 aa9.11□□□□□ -0.95
UBE3B-207ENST00000537063 PCDHB3Q9Y5E6 796 aa9.11□□□□□ -0.95
UBE3B-207ENST00000537063 ZFC3H1O60293 1989 aaKnown RBP9.11□□□□□ -0.95
UBE3B-207ENST00000537063 UPK3BL1B0FP48 263 aa9.11□□□□□ -0.95
UBE3B-207ENST00000537063 LOC730098B7Z3J9 87 aa9.11□□□□□ -0.95
UBE3B-207ENST00000537063 UPK3BL2E5RIL1 263 aa9.11□□□□□ -0.95
UBE3B-207ENST00000537063 TIPRLO75663 272 aa9.11□□□□□ -0.95
UBE3B-207ENST00000537063 PSMA4P25789 261 aaKnown RBP9.11□□□□□ -0.95
UBE3B-207ENST00000537063 WEE1P30291 646 aa9.11□□□□□ -0.95
UBE3B-207ENST00000537063 OXTRP30559 389 aa9.11□□□□□ -0.95
UBE3B-207ENST00000537063 CCT8P50990 548 aa9.11□□□□□ -0.95
UBE3B-207ENST00000537063 C6orf52Q5T4I8 152 aa9.11□□□□□ -0.95
UBE3B-207ENST00000537063 DPPA4Q7L190 304 aa9.11□□□□□ -0.95
UBE3B-207ENST00000537063 HSD11B1LQ7Z5J1 315 aa9.11□□□□□ -0.95
UBE3B-207ENST00000537063 EPHX4Q8IUS5 362 aa9.11□□□□□ -0.95
UBE3B-207ENST00000537063 TRAM1L1Q8N609 369 aa9.11□□□□□ -0.95
UBE3B-207ENST00000537063 L3MBTL4Q8NA19 623 aa9.11□□□□□ -0.95
UBE3B-207ENST00000537063 GLB1L3Q8NCI6 653 aaPredicted RBP9.11□□□□□ -0.95
UBE3B-207ENST00000537063 VPS35Q96QK1 796 aa9.11□□□□□ -0.95
UBE3B-207ENST00000537063 HHIPQ96QV1 700 aa9.11□□□□□ -0.95
UBE3B-207ENST00000537063 SEMA6AQ9H2E6 1030 aa9.11□□□□□ -0.95
UBE3B-207ENST00000537063 CLMPQ9H6B4 373 aa9.11□□□□□ -0.95
UBE3B-207ENST00000537063 FARSBQ9NSD9 589 aaKnown RBP9.11□□□□□ -0.95
UBE3B-207ENST00000537063 PCDHGB4Q9UN71 923 aa9.11□□□□□ -0.95
UBE3B-207ENST00000537063 PCDHGB5Q9Y5G0 923 aa9.11□□□□□ -0.95
UBE3B-207ENST00000537063 ZBBXA8MT70 800 aa9.1□□□□□ -0.95
UBE3B-207ENST00000537063 KPNA5O15131 536 aa9.1□□□□□ -0.95
UBE3B-207ENST00000537063 CSPG5O95196 566 aa9.1□□□□□ -0.95
UBE3B-207ENST00000537063 CLDN9O95484 217 aa9.1□□□□□ -0.95
UBE3B-207ENST00000537063 CTSLP07711 333 aa9.1□□□□□ -0.95
UBE3B-207ENST00000537063 PABPC4LP0CB38 370 aaKnown RBP9.1□□□□□ -0.95
UBE3B-207ENST00000537063 HNRNPFP52597 415 aaKnown RBP9.1□□□□□ -0.95
UBE3B-207ENST00000537063 PRKCQQ04759 706 aa9.1□□□□□ -0.95
UBE3B-207ENST00000537063 CAMK1Q14012 370 aa9.1□□□□□ -0.95
UBE3B-207ENST00000537063 LIN52Q52LA3 116 aa9.1□□□□□ -0.95
UBE3B-207ENST00000537063 PROSER1Q86XN7 944 aa9.1□□□□□ -0.95
UBE3B-207ENST00000537063 VRK3Q8IV63 474 aa9.1□□□□□ -0.95
UBE3B-207ENST00000537063 PAF1Q8N7H5 531 aa9.1□□□□□ -0.95
UBE3B-207ENST00000537063 ZNF784Q8NCA9 323 aaPredicted RBP9.1□□□□□ -0.95
UBE3B-207ENST00000537063 TRPV3Q8NET8 790 aa9.1□□□□□ -0.95
UBE3B-207ENST00000537063 DNAJB14Q8TBM8 379 aa9.1□□□□□ -0.95
UBE3B-207ENST00000537063 LRIG1Q96JA1 1093 aa9.1□□□□□ -0.95
UBE3B-207ENST00000537063 ZSWIM3Q96MP5 696 aa9.1□□□□□ -0.95
UBE3B-207ENST00000537063 SLC29A1Q99808 456 aa9.1□□□□□ -0.95
UBE3B-207ENST00000537063 C8orf4Q9NR00 106 aa9.1□□□□□ -0.95
UBE3B-207ENST00000537063 DUS2Q9NX74 493 aaKnown RBP9.1□□□□□ -0.95
UBE3B-207ENST00000537063 EGFL7Q9UHF1 273 aa9.1□□□□□ -0.95
UBE3B-207ENST00000537063 ANGPTL3Q9Y5C1 460 aa9.1□□□□□ -0.95
UBE3B-207ENST00000537063 LRRK1Q38SD2 2015 aa9.1□□□□□ -0.95
UBE3B-207ENST00000537063 TXNDC9O14530 226 aa9.1□□□□□ -0.95
UBE3B-207ENST00000537063 ULK1O75385 1050 aa9.1□□□□□ -0.95
UBE3B-207ENST00000537063 SRPRAP08240 638 aaKnown RBP9.1□□□□□ -0.95
UBE3B-207ENST00000537063 CISD3P0C7P0 127 aa9.1□□□□□ -0.95
UBE3B-207ENST00000537063 C7P10643 843 aa9.1□□□□□ -0.95
UBE3B-207ENST00000537063 TIMP2P16035 220 aa9.1□□□□□ -0.95
UBE3B-207ENST00000537063 PCSK2P16519 638 aa9.1□□□□□ -0.95
UBE3B-207ENST00000537063 HOXB9P17482 250 aaPredicted RBP9.1□□□□□ -0.95
UBE3B-207ENST00000537063 CTNNB1P35222 781 aa9.1□□□□□ -0.95
UBE3B-207ENST00000537063 RPIAP49247 311 aa9.1□□□□□ -0.95
UBE3B-207ENST00000537063 RPL38P63173 70 aaKnown RBP9.1□□□□□ -0.95
UBE3B-207ENST00000537063 USP39Q53GS9 565 aaKnown RBP9.1□□□□□ -0.95
UBE3B-207ENST00000537063 NHSL2Q5HYW2 709 aa9.1□□□□□ -0.95
UBE3B-207ENST00000537063 TBCELQ5QJ74 424 aa9.1□□□□□ -0.95
UBE3B-207ENST00000537063 TMEM240Q5SV17 173 aa9.1□□□□□ -0.95
UBE3B-207ENST00000537063 UBE2R2Q712K3 238 aaPredicted RBP9.1□□□□□ -0.95
UBE3B-207ENST00000537063 SPRED1Q7Z699 444 aa9.1□□□□□ -0.95
UBE3B-207ENST00000537063 TECPR1Q7Z6L1 1165 aa9.1□□□□□ -0.95
UBE3B-207ENST00000537063 RAVER1Q8IY67 606 aaKnown RBP9.1□□□□□ -0.95
UBE3B-207ENST00000537063 POF1BQ8WVV4 589 aa9.1□□□□□ -0.95
UBE3B-207ENST00000537063 NCSTNQ92542 709 aa9.1□□□□□ -0.95
UBE3B-207ENST00000537063 FCRL1Q96LA6 429 aa9.1□□□□□ -0.95
UBE3B-207ENST00000537063 TMEM74Q96NL1 305 aa9.1□□□□□ -0.95
UBE3B-207ENST00000537063 HBEGFQ99075 208 aa9.1□□□□□ -0.95
UBE3B-207ENST00000537063 CGREF1Q99674 301 aa9.1□□□□□ -0.95
UBE3B-207ENST00000537063 TRIM8Q9BZR9 551 aa9.1□□□□□ -0.95
UBE3B-207ENST00000537063 ZNF639Q9UID6 485 aa9.1□□□□□ -0.95
UBE3B-207ENST00000537063 ZNF490Q9ULM2 529 aaPredicted RBP9.1□□□□□ -0.95
UBE3B-207ENST00000537063 SUFUQ9UMX1 484 aa9.1□□□□□ -0.95
UBE3B-207ENST00000537063 EIF3LQ9Y262 564 aaKnown RBP9.1□□□□□ -0.95
UBE3B-207ENST00000537063 HCFC2Q9Y5Z7 792 aa9.1□□□□□ -0.95
UBE3B-207ENST00000537063 TRBV5-3A0A0A0MS03 114 aa9.1□□□□□ -0.95
UBE3B-207ENST00000537063 KANSL1LA0AUZ9 987 aa9.1□□□□□ -0.95
UBE3B-207ENST00000537063 TTC34A8MYJ7 566 aa9.1□□□□□ -0.95
UBE3B-207ENST00000537063 DLGAP1O14490 977 aa9.1□□□□□ -0.95
UBE3B-207ENST00000537063 LEFTY1O75610 366 aa9.1□□□□□ -0.95
UBE3B-207ENST00000537063 SLCO2B1O94956 709 aa9.1□□□□□ -0.95
UBE3B-207ENST00000537063 TNFAIP8O95379 198 aa9.1□□□□□ -0.95
UBE3B-207ENST00000537063 FCGR1AP12314 374 aa9.1□□□□□ -0.95
UBE3B-207ENST00000537063 GNPDA1P46926 289 aa9.1□□□□□ -0.95
UBE3B-207ENST00000537063 AP1S2P56377 157 aa9.1□□□□□ -0.95
UBE3B-207ENST00000537063 PCDH1Q08174 1060 aa9.1□□□□□ -0.95
UBE3B-207ENST00000537063 GK3PQ14409 553 aa9.1□□□□□ -0.95
UBE3B-207ENST00000537063 ATP6AP1Q15904 470 aa9.1□□□□□ -0.95
UBE3B-207ENST00000537063 AASDHQ4L235 1098 aaPredicted RBP9.1□□□□□ -0.95
UBE3B-207ENST00000537063 AMIGO2Q86SJ2 522 aa9.1□□□□□ -0.95
UBE3B-207ENST00000537063 RGL4Q8IZJ4 473 aa9.1□□□□□ -0.95
UBE3B-207ENST00000537063 GALNT4Q8N4A0 578 aa9.1□□□□□ -0.95
UBE3B-207ENST00000537063 ZNF707Q96C28 371 aaPredicted RBP9.1□□□□□ -0.95
UBE3B-207ENST00000537063 ANKRD60Q9BZ19 345 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms