RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 NRTNQ99748 197 aa19.08■□□□□ 0.64
TNFRSF1B-204ENST00000536782 PCMTD2Q9NV79 361 aa19.08■□□□□ 0.64
TNFRSF1B-204ENST00000536782 VPS4AQ9UN37 437 aa19.08■□□□□ 0.64
TNFRSF1B-204ENST00000536782 UNC79Q9P2D8 2635 aa19.08■□□□□ 0.64
TNFRSF1B-204ENST00000536782 CCDC88CQ9P219 2028 aa19.07■□□□□ 0.64
TNFRSF1B-204ENST00000536782 GOLGA6L9A6NEM1 432 aa19.07■□□□□ 0.64
TNFRSF1B-204ENST00000536782 TMEM63AO94886 807 aa19.07■□□□□ 0.64
TNFRSF1B-204ENST00000536782 AP2A2O94973 939 aa19.07■□□□□ 0.64
TNFRSF1B-204ENST00000536782 PRSS56P0CW18 603 aa19.07■□□□□ 0.64
TNFRSF1B-204ENST00000536782 CACNG1Q06432 222 aa19.07■□□□□ 0.64
TNFRSF1B-204ENST00000536782 PRKG2Q13237 762 aa19.07■□□□□ 0.64
TNFRSF1B-204ENST00000536782 BOP1Q14137 746 aaKnown RBP19.07■□□□□ 0.64
TNFRSF1B-204ENST00000536782 ADGRF3Q8IZF5 1079 aa19.07■□□□□ 0.64
TNFRSF1B-204ENST00000536782 CLDN19Q8N6F1 224 aa19.07■□□□□ 0.64
TNFRSF1B-204ENST00000536782 TTC13Q8NBP0 860 aa19.07■□□□□ 0.64
TNFRSF1B-204ENST00000536782 CPT1CQ8TCG5 803 aa19.07■□□□□ 0.64
TNFRSF1B-204ENST00000536782 CDKN2AIPNLQ96HQ2 116 aa19.07■□□□□ 0.64
TNFRSF1B-204ENST00000536782 DPH2Q9BQC3 489 aaPredicted RBP19.07■□□□□ 0.64
TNFRSF1B-204ENST00000536782 HGH1Q9BTY7 390 aa19.07■□□□□ 0.64
TNFRSF1B-204ENST00000536782 KLHL25Q9H0H3 589 aa19.07■□□□□ 0.64
TNFRSF1B-204ENST00000536782 XKR8Q9H6D3 395 aa19.07■□□□□ 0.64
TNFRSF1B-204ENST00000536782 LRRC40Q9H9A6 602 aa19.07■□□□□ 0.64
TNFRSF1B-204ENST00000536782 PCDHGB7Q9Y5F8 929 aa19.07■□□□□ 0.64
TNFRSF1B-204ENST00000536782 FER1L5A0AVI2 2057 aa19.06■□□□□ 0.64
TNFRSF1B-204ENST00000536782 E7EQ34 232 aa19.06■□□□□ 0.64
TNFRSF1B-204ENST00000536782 CAPN1P07384 714 aa19.06■□□□□ 0.64
TNFRSF1B-204ENST00000536782 HBQ1P09105 142 aa19.06■□□□□ 0.64
TNFRSF1B-204ENST00000536782 PVRP15151 417 aa19.06■□□□□ 0.64
TNFRSF1B-204ENST00000536782 ITGA1P56199 1179 aa19.06■□□□□ 0.64
TNFRSF1B-204ENST00000536782 POU6F1Q14863 301 aa19.06■□□□□ 0.64
TNFRSF1B-204ENST00000536782 NADK2Q4G0N4 442 aa19.06■□□□□ 0.64
TNFRSF1B-204ENST00000536782 FAM198BQ6UWH4 519 aa19.06■□□□□ 0.64
TNFRSF1B-204ENST00000536782 CDHR3Q6ZTQ4 885 aa19.06■□□□□ 0.64
TNFRSF1B-204ENST00000536782 MICALCLQ6ZW33 695 aa19.06■□□□□ 0.64
TNFRSF1B-204ENST00000536782 HOOK3Q86VS8 718 aa19.06■□□□□ 0.64
TNFRSF1B-204ENST00000536782 LRRC57Q8N9N7 239 aa19.06■□□□□ 0.64
TNFRSF1B-204ENST00000536782 FAM71DQ8N9W8 422 aa19.06■□□□□ 0.64
TNFRSF1B-204ENST00000536782 STYXQ8WUJ0 223 aa19.06■□□□□ 0.64
TNFRSF1B-204ENST00000536782 ALS2CR12Q96Q35 445 aa19.06■□□□□ 0.64
TNFRSF1B-204ENST00000536782 ACTR10Q9NZ32 417 aa19.06■□□□□ 0.64
TNFRSF1B-204ENST00000536782 SMARCAL1Q9NZC9 954 aa19.06■□□□□ 0.64
TNFRSF1B-204ENST00000536782 G3BP2Q9UN86 482 aaKnown RBP19.06■□□□□ 0.64
TNFRSF1B-204ENST00000536782 ZNF451Q9Y4E5 1061 aa19.06■□□□□ 0.64
TNFRSF1B-204ENST00000536782 PIKFYVEQ9Y2I7 2098 aa19.05■□□□□ 0.64
TNFRSF1B-204ENST00000536782 LIN7AO14910 233 aaPredicted RBP19.05■□□□□ 0.64
TNFRSF1B-204ENST00000536782 ZNF749O43361 778 aa19.05■□□□□ 0.64
TNFRSF1B-204ENST00000536782 CEACAM4O75871 244 aa19.05■□□□□ 0.64
TNFRSF1B-204ENST00000536782 METTL18O95568 372 aa19.05■□□□□ 0.64
TNFRSF1B-204ENST00000536782 AGXTP21549 392 aa19.05■□□□□ 0.64
TNFRSF1B-204ENST00000536782 NSG1P42857 185 aa19.05■□□□□ 0.64
TNFRSF1B-204ENST00000536782 VAV2P52735 878 aa19.05■□□□□ 0.64
TNFRSF1B-204ENST00000536782 DBN1Q16643 649 aa19.05■□□□□ 0.64
TNFRSF1B-204ENST00000536782 P3H1Q32P28 736 aa19.05■□□□□ 0.64
TNFRSF1B-204ENST00000536782 PTCHD3Q3KNS1 767 aa19.05■□□□□ 0.64
TNFRSF1B-204ENST00000536782 FAM69BQ5VUD6 431 aa19.05■□□□□ 0.64
TNFRSF1B-204ENST00000536782 SPESP1Q6UW49 350 aa19.05■□□□□ 0.64
TNFRSF1B-204ENST00000536782 MED25Q71SY5 747 aa19.05■□□□□ 0.64
TNFRSF1B-204ENST00000536782 PIANPQ8IYJ0 282 aa19.05■□□□□ 0.64
TNFRSF1B-204ENST00000536782 GPR135Q8IZ08 494 aa19.05■□□□□ 0.64
TNFRSF1B-204ENST00000536782 TMEM102Q8N9M5 508 aaPredicted RBP19.05■□□□□ 0.64
TNFRSF1B-204ENST00000536782 GALNT11Q8NCW6 608 aa19.05■□□□□ 0.64
TNFRSF1B-204ENST00000536782 N4BP2L2Q92802 583 aaPredicted RBP19.05■□□□□ 0.64
TNFRSF1B-204ENST00000536782 LACRTQ9GZZ8 138 aa19.05■□□□□ 0.64
TNFRSF1B-204ENST00000536782 REXO2Q9Y3B8 237 aaKnown RBP19.05■□□□□ 0.64
TNFRSF1B-204ENST00000536782 CENPEQ02224 2701 aa19.04■□□□□ 0.64
TNFRSF1B-204ENST00000536782 GRID2IPA4D2P6 1211 aa19.04■□□□□ 0.64
TNFRSF1B-204ENST00000536782 C9J4A7 227 aa19.04■□□□□ 0.64
TNFRSF1B-204ENST00000536782 QSOX1O00391 747 aa19.04■□□□□ 0.64
TNFRSF1B-204ENST00000536782 PSMD3O43242 534 aa19.04■□□□□ 0.64
TNFRSF1B-204ENST00000536782 SHMT2P34897 504 aa19.04■□□□□ 0.64
TNFRSF1B-204ENST00000536782 UQCRFS1P47985 274 aa19.04■□□□□ 0.64
TNFRSF1B-204ENST00000536782 RRADP55042 308 aa19.04■□□□□ 0.64
TNFRSF1B-204ENST00000536782 NCF4Q15080 339 aa19.04■□□□□ 0.64
TNFRSF1B-204ENST00000536782 UBL4BQ8N7F7 174 aa19.04■□□□□ 0.64
TNFRSF1B-204ENST00000536782 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.04■□□□□ 0.64
TNFRSF1B-204ENST00000536782 PSMG3-AS1Q96PY0 264 aa19.04■□□□□ 0.64
TNFRSF1B-204ENST00000536782 PIH1D1Q9NWS0 290 aaKnown RBP19.04■□□□□ 0.64
TNFRSF1B-204ENST00000536782 AMFRQ9UKV5 643 aa19.04■□□□□ 0.64
TNFRSF1B-204ENST00000536782 ICKQ9UPZ9 632 aa19.04■□□□□ 0.64
TNFRSF1B-204ENST00000536782 ASF1AQ9Y294 204 aa19.04■□□□□ 0.64
TNFRSF1B-204ENST00000536782 PADI2Q9Y2J8 665 aa19.04■□□□□ 0.64
TNFRSF1B-204ENST00000536782 ITPR2Q14571 2701 aa19.03■□□□□ 0.64
TNFRSF1B-204ENST00000536782 BLACEA4D250 179 aa19.03■□□□□ 0.64
TNFRSF1B-204ENST00000536782 ZNF185O15231 689 aa19.03■□□□□ 0.64
TNFRSF1B-204ENST00000536782 DPM1O60762 260 aa19.03■□□□□ 0.64
TNFRSF1B-204ENST00000536782 SORBS2O94875 1100 aaKnown RBP19.03■□□□□ 0.64
TNFRSF1B-204ENST00000536782 AP2A1O95782 977 aa19.03■□□□□ 0.64
TNFRSF1B-204ENST00000536782 FTH1P02794 183 aa19.03■□□□□ 0.64
TNFRSF1B-204ENST00000536782 GNLYP22749 145 aa19.03■□□□□ 0.64
TNFRSF1B-204ENST00000536782 MSNP26038 577 aaKnown RBP19.03■□□□□ 0.64
TNFRSF1B-204ENST00000536782 ITIH4Q14624 930 aa19.03■□□□□ 0.64
TNFRSF1B-204ENST00000536782 RAD9BQ6WBX8 426 aa19.03■□□□□ 0.64
TNFRSF1B-204ENST00000536782 UNC5AQ6ZN44 842 aa19.03■□□□□ 0.64
TNFRSF1B-204ENST00000536782 PEX26Q7Z412 305 aa19.03■□□□□ 0.64
TNFRSF1B-204ENST00000536782 RAB43Q86YS6 212 aa19.03■□□□□ 0.64
TNFRSF1B-204ENST00000536782 HPS6Q86YV9 775 aa19.03■□□□□ 0.64
TNFRSF1B-204ENST00000536782 ZBTB2Q8N680 514 aa19.03■□□□□ 0.64
TNFRSF1B-204ENST00000536782 C19orf47Q8N9M1 422 aaKnown RBP19.03■□□□□ 0.64
TNFRSF1B-204ENST00000536782 FDCSPQ8NFU4 85 aa19.03■□□□□ 0.64
TNFRSF1B-204ENST00000536782 OR5AR1Q8NGP9 310 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms