RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 QSOX1O00391 747 aa17.38■□□□□ 0.37
TNFRSF1A-209ENST00000536717 TP73O15350 636 aa17.38■□□□□ 0.37
TNFRSF1A-209ENST00000536717 STK17BO94768 372 aa17.38■□□□□ 0.37
TNFRSF1A-209ENST00000536717 PRB1P04280 392 aa17.38■□□□□ 0.37
TNFRSF1A-209ENST00000536717 NDUFS1P28331 727 aa17.38■□□□□ 0.37
TNFRSF1A-209ENST00000536717 CD151P48509 253 aa17.38■□□□□ 0.37
TNFRSF1A-209ENST00000536717 PRAMEP78395 509 aa17.38■□□□□ 0.37
TNFRSF1A-209ENST00000536717 OOSP2Q86WS3 158 aa17.38■□□□□ 0.37
TNFRSF1A-209ENST00000536717 OR6P1Q8NGX9 317 aa17.38■□□□□ 0.37
TNFRSF1A-209ENST00000536717 UBXN4Q92575 508 aa17.38■□□□□ 0.37
TNFRSF1A-209ENST00000536717 SLC41A2Q96JW4 573 aa17.38■□□□□ 0.37
TNFRSF1A-209ENST00000536717 NRTNQ99748 197 aa17.38■□□□□ 0.37
TNFRSF1A-209ENST00000536717 TREX1Q9NSU2 369 aa17.38■□□□□ 0.37
TNFRSF1A-209ENST00000536717 SYBUQ9NX95 663 aa17.38■□□□□ 0.37
TNFRSF1A-209ENST00000536717 CFAP46Q8IYW2 2715 aa17.38■□□□□ 0.37
TNFRSF1A-209ENST00000536717 MAGEB16A2A368 324 aa17.37■□□□□ 0.37
TNFRSF1A-209ENST00000536717 OR6C74A6NCV1 312 aa17.37■□□□□ 0.37
TNFRSF1A-209ENST00000536717 TLCD2A6NGC4 264 aa17.37■□□□□ 0.37
TNFRSF1A-209ENST00000536717 IFRD1O00458 451 aaPredicted RBP17.37■□□□□ 0.37
TNFRSF1A-209ENST00000536717 LIN7AO14910 233 aaPredicted RBP17.37■□□□□ 0.37
TNFRSF1A-209ENST00000536717 DLGAP3O95886 979 aa17.37■□□□□ 0.37
TNFRSF1A-209ENST00000536717 ZNF28P17035 718 aa17.37■□□□□ 0.37
TNFRSF1A-209ENST00000536717 TRADDQ15628 312 aa17.37■□□□□ 0.37
TNFRSF1A-209ENST00000536717 TAF1BQ53T94 588 aaPredicted RBP17.37■□□□□ 0.37
TNFRSF1A-209ENST00000536717 LYPLAL1Q5VWZ2 237 aa17.37■□□□□ 0.37
TNFRSF1A-209ENST00000536717 CERS6Q6ZMG9 384 aa17.37■□□□□ 0.37
TNFRSF1A-209ENST00000536717 IFT20Q8IY31 132 aa17.37■□□□□ 0.37
TNFRSF1A-209ENST00000536717 NLGN4XQ8N0W4 816 aa17.37■□□□□ 0.37
TNFRSF1A-209ENST00000536717 PHC3Q8NDX5 983 aa17.37■□□□□ 0.37
TNFRSF1A-209ENST00000536717 ACVR1CQ8NER5 493 aa17.37■□□□□ 0.37
TNFRSF1A-209ENST00000536717 NLGN4YQ8NFZ3 816 aaPredicted RBP17.37■□□□□ 0.37
TNFRSF1A-209ENST00000536717 OR4E2Q8NGC2 313 aa17.37■□□□□ 0.37
TNFRSF1A-209ENST00000536717 WBP1Q96G27 269 aa17.37■□□□□ 0.37
TNFRSF1A-209ENST00000536717 FERD3LQ96RJ6 166 aa17.37■□□□□ 0.37
TNFRSF1A-209ENST00000536717 CD180Q99467 661 aa17.37■□□□□ 0.37
TNFRSF1A-209ENST00000536717 FAM129AQ9BZQ8 928 aa17.37■□□□□ 0.37
TNFRSF1A-209ENST00000536717 MRM3Q9HC36 420 aaKnown RBP17.37■□□□□ 0.37
TNFRSF1A-209ENST00000536717 C1QL1O75973 258 aa17.37■□□□□ 0.37
TNFRSF1A-209ENST00000536717 FTH1P02794 183 aa17.37■□□□□ 0.37
TNFRSF1A-209ENST00000536717 OR56A5P0C7T3 313 aa17.37■□□□□ 0.37
TNFRSF1A-209ENST00000536717 LIFP15018 202 aa17.37■□□□□ 0.37
TNFRSF1A-209ENST00000536717 NMBRP28336 390 aa17.37■□□□□ 0.37
TNFRSF1A-209ENST00000536717 ARCN1P48444 511 aaKnown RBP17.37■□□□□ 0.37
TNFRSF1A-209ENST00000536717 KRT33BQ14525 404 aa17.37■□□□□ 0.37
TNFRSF1A-209ENST00000536717 BBS9Q3SYG4 887 aa17.37■□□□□ 0.37
TNFRSF1A-209ENST00000536717 FASTKD1Q53R41 847 aaKnown RBP17.37■□□□□ 0.37
TNFRSF1A-209ENST00000536717 NAPRTQ6XQN6 538 aa17.37■□□□□ 0.37
TNFRSF1A-209ENST00000536717 LDB1Q86U70 411 aaPredicted RBP17.37■□□□□ 0.37
TNFRSF1A-209ENST00000536717 FBXO25Q8TCJ0 367 aa17.37■□□□□ 0.37
TNFRSF1A-209ENST00000536717 IFT81Q8WYA0 676 aa17.37■□□□□ 0.37
TNFRSF1A-209ENST00000536717 ELMO1Q92556 727 aa17.37■□□□□ 0.37
TNFRSF1A-209ENST00000536717 TFGQ92734 400 aaPredicted RBP17.37■□□□□ 0.37
TNFRSF1A-209ENST00000536717 RNF31Q96EP0 1072 aa17.37■□□□□ 0.37
TNFRSF1A-209ENST00000536717 PPM1MQ96MI6 270 aa17.37■□□□□ 0.37
TNFRSF1A-209ENST00000536717 KIFC1Q9BW19 673 aa17.37■□□□□ 0.37
TNFRSF1A-209ENST00000536717 MARCH4Q9P2E8 410 aaPredicted RBP17.37■□□□□ 0.37
TNFRSF1A-209ENST00000536717 SOX13Q9UN79 622 aa17.37■□□□□ 0.37
TNFRSF1A-209ENST00000536717 MAD1L1Q9Y6D9 718 aa17.37■□□□□ 0.37
TNFRSF1A-209ENST00000536717 SLC5A10A0PJK1 596 aa17.36■□□□□ 0.37
TNFRSF1A-209ENST00000536717 EIF4E1BA6NMX2 242 aaKnown RBP17.36■□□□□ 0.37
TNFRSF1A-209ENST00000536717 BHMG1C9JSJ3 638 aaPredicted RBP17.36■□□□□ 0.37
TNFRSF1A-209ENST00000536717 FGF5P12034 268 aa17.36■□□□□ 0.37
TNFRSF1A-209ENST00000536717 FOLR1P15328 257 aa17.36■□□□□ 0.37
TNFRSF1A-209ENST00000536717 POLR2CP19387 275 aaPredicted RBP17.36■□□□□ 0.37
TNFRSF1A-209ENST00000536717 ACADLP28330 430 aa17.36■□□□□ 0.37
TNFRSF1A-209ENST00000536717 KPNA2P52292 529 aaKnown RBP17.36■□□□□ 0.37
TNFRSF1A-209ENST00000536717 DHX9Q08211 1270 aaKnown RBP17.36■□□□□ 0.37
TNFRSF1A-209ENST00000536717 CUL1Q13616 776 aa17.36■□□□□ 0.37
TNFRSF1A-209ENST00000536717 BOP1Q14137 746 aaKnown RBP17.36■□□□□ 0.37
TNFRSF1A-209ENST00000536717 IL11RAQ14626 422 aa17.36■□□□□ 0.37
TNFRSF1A-209ENST00000536717 KCNAB1Q14722 419 aa17.36■□□□□ 0.37
TNFRSF1A-209ENST00000536717 BRD3Q15059 726 aa17.36■□□□□ 0.37
TNFRSF1A-209ENST00000536717 ZNF449Q6P9G9 518 aa17.36■□□□□ 0.37
TNFRSF1A-209ENST00000536717 ZDHHC24Q6UX98 284 aa17.36■□□□□ 0.37
TNFRSF1A-209ENST00000536717 CENPUQ71F23 418 aa17.36■□□□□ 0.37
TNFRSF1A-209ENST00000536717 MPP5Q8N3R9 675 aa17.36■□□□□ 0.37
TNFRSF1A-209ENST00000536717 OR52E1Q8NGJ3 308 aa17.36■□□□□ 0.37
TNFRSF1A-209ENST00000536717 LRRC39Q96DD0 335 aa17.36■□□□□ 0.37
TNFRSF1A-209ENST00000536717 SIGLEC10Q96LC7 697 aa17.36■□□□□ 0.37
TNFRSF1A-209ENST00000536717 PWWP2AQ96N64 755 aa17.36■□□□□ 0.37
TNFRSF1A-209ENST00000536717 TTC1Q99614 292 aa17.36■□□□□ 0.37
TNFRSF1A-209ENST00000536717 NAT9Q9BTE0 207 aa17.36■□□□□ 0.37
TNFRSF1A-209ENST00000536717 MVB12BQ9H7P6 319 aa17.36■□□□□ 0.37
TNFRSF1A-209ENST00000536717 CATSPERZQ9NTU4 200 aa17.36■□□□□ 0.37
TNFRSF1A-209ENST00000536717 MTRF1LQ9UGC7 380 aaKnown RBP17.36■□□□□ 0.37
TNFRSF1A-209ENST00000536717 FER1L5A0AVI2 2057 aa17.35■□□□□ 0.37
TNFRSF1A-209ENST00000536717 LOC101059948A0A1B0GTJ6 334 aa17.35■□□□□ 0.37
TNFRSF1A-209ENST00000536717 UBA6A0AVT1 1052 aaPredicted RBP17.35■□□□□ 0.37
TNFRSF1A-209ENST00000536717 BTN3A3O00478 584 aa17.35■□□□□ 0.37
TNFRSF1A-209ENST00000536717 MAP4P27816 1152 aaKnown RBP17.35■□□□□ 0.37
TNFRSF1A-209ENST00000536717 CYP4F2P78329 520 aa17.35■□□□□ 0.37
TNFRSF1A-209ENST00000536717 MSS51Q4VC12 460 aa17.35■□□□□ 0.37
TNFRSF1A-209ENST00000536717 FBXO38Q6PIJ6 1188 aa17.35■□□□□ 0.37
TNFRSF1A-209ENST00000536717 KMT5CQ86Y97 462 aa17.35■□□□□ 0.37
TNFRSF1A-209ENST00000536717 SIDT2Q8NBJ9 832 aaKnown RBP17.35■□□□□ 0.37
TNFRSF1A-209ENST00000536717 LKAAEAR1Q8TD35 194 aa17.35■□□□□ 0.37
TNFRSF1A-209ENST00000536717 LCN9Q8WX39 176 aa17.35■□□□□ 0.37
TNFRSF1A-209ENST00000536717 MFSD3Q96ES6 412 aa17.35■□□□□ 0.37
TNFRSF1A-209ENST00000536717 STAMBPL1Q96FJ0 436 aa17.35■□□□□ 0.37
TNFRSF1A-209ENST00000536717 ELMO2Q96JJ3 720 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms