RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 CD82P27701 267 aa12.78□□□□□ -0.36
PRKDC-206ENST00000536429 PPARGP37231 505 aaPredicted RBP12.78□□□□□ -0.36
PRKDC-206ENST00000536429 TMPRSS3P57727 454 aa12.78□□□□□ -0.36
PRKDC-206ENST00000536429 DR1Q01658 176 aa12.78□□□□□ -0.36
PRKDC-206ENST00000536429 DHX9Q08211 1270 aaKnown RBP12.78□□□□□ -0.36
PRKDC-206ENST00000536429 ABRQ12979 859 aa12.78□□□□□ -0.36
PRKDC-206ENST00000536429 BROXQ5VW32 411 aa12.78□□□□□ -0.36
PRKDC-206ENST00000536429 MRNIPQ6NTE8 343 aa12.78□□□□□ -0.36
PRKDC-206ENST00000536429 ZNF449Q6P9G9 518 aa12.78□□□□□ -0.36
PRKDC-206ENST00000536429 SYT10Q6XYQ8 523 aa12.78□□□□□ -0.36
PRKDC-206ENST00000536429 TIPARPQ7Z3E1 657 aaKnown RBP12.78□□□□□ -0.36
PRKDC-206ENST00000536429 SDCCAG8Q86SQ7 713 aaPredicted RBP12.78□□□□□ -0.36
PRKDC-206ENST00000536429 AMIGO1Q86WK6 493 aa12.78□□□□□ -0.36
PRKDC-206ENST00000536429 CILP2Q8IUL8 1156 aa12.78□□□□□ -0.36
PRKDC-206ENST00000536429 ADGRF3Q8IZF5 1079 aa12.78□□□□□ -0.36
PRKDC-206ENST00000536429 NKD1Q969G9 470 aa12.78□□□□□ -0.36
PRKDC-206ENST00000536429 STAMBPL1Q96FJ0 436 aa12.78□□□□□ -0.36
PRKDC-206ENST00000536429 BBC3Q96PG8 261 aaPredicted RBP12.78□□□□□ -0.36
PRKDC-206ENST00000536429 KRT12Q99456 494 aa12.78□□□□□ -0.36
PRKDC-206ENST00000536429 ASPSCR1Q9BZE9 553 aa12.78□□□□□ -0.36
PRKDC-206ENST00000536429 TFB2MQ9H5Q4 396 aaKnown RBP12.78□□□□□ -0.36
PRKDC-206ENST00000536429 PILRAQ9UKJ1 303 aa12.78□□□□□ -0.36
PRKDC-206ENST00000536429 POMT2Q9UKY4 750 aa12.78□□□□□ -0.36
PRKDC-206ENST00000536429 RUVBL2Q9Y230 463 aaKnown RBP12.78□□□□□ -0.36
PRKDC-206ENST00000536429 TDRKHQ9Y2W6 561 aaKnown RBP12.78□□□□□ -0.36
PRKDC-206ENST00000536429 SDK2Q58EX2 2172 aa12.78□□□□□ -0.36
PRKDC-206ENST00000536429 BSNQ9UPA5 3926 aa12.78□□□□□ -0.36
PRKDC-206ENST00000536429 MAGEB16A2A368 324 aa12.77□□□□□ -0.37
PRKDC-206ENST00000536429 GSAPA4D1B5 854 aa12.77□□□□□ -0.37
PRKDC-206ENST00000536429 KRT87PA6NCN2 255 aa12.77□□□□□ -0.37
PRKDC-206ENST00000536429 TLCD2A6NGC4 264 aa12.77□□□□□ -0.37
PRKDC-206ENST00000536429 RAD1O60671 282 aa12.77□□□□□ -0.37
PRKDC-206ENST00000536429 STK17BO94768 372 aa12.77□□□□□ -0.37
PRKDC-206ENST00000536429 USP1O94782 785 aa12.77□□□□□ -0.37
PRKDC-206ENST00000536429 SLCO2B1O94956 709 aa12.77□□□□□ -0.37
PRKDC-206ENST00000536429 S1PR4O95977 384 aa12.77□□□□□ -0.37
PRKDC-206ENST00000536429 PAMP19021 973 aa12.77□□□□□ -0.37
PRKDC-206ENST00000536429 OGNP20774 298 aaKnown RBP12.77□□□□□ -0.37
PRKDC-206ENST00000536429 PAFAH1B1P43034 410 aa12.77□□□□□ -0.37
PRKDC-206ENST00000536429 ETF1P62495 437 aaKnown RBP12.77□□□□□ -0.37
PRKDC-206ENST00000536429 MPP1Q00013 466 aa12.77□□□□□ -0.37
PRKDC-206ENST00000536429 PLOD1Q02809 727 aaPredicted RBP12.77□□□□□ -0.37
PRKDC-206ENST00000536429 CTBP1Q13363 440 aa12.77□□□□□ -0.37
PRKDC-206ENST00000536429 BBS9Q3SYG4 887 aa12.77□□□□□ -0.37
PRKDC-206ENST00000536429 HP1BP3Q5SSJ5 553 aaPredicted RBP12.77□□□□□ -0.37
PRKDC-206ENST00000536429 ARMC3Q5W041 872 aa12.77□□□□□ -0.37
PRKDC-206ENST00000536429 ZNF470Q6ECI4 717 aa12.77□□□□□ -0.37
PRKDC-206ENST00000536429 ARMC6Q6NXE6 501 aa12.77□□□□□ -0.37
PRKDC-206ENST00000536429 CEACAM20Q6UY09 585 aa12.77□□□□□ -0.37
PRKDC-206ENST00000536429 UNC5AQ6ZN44 842 aa12.77□□□□□ -0.37
PRKDC-206ENST00000536429 TRIM73Q86UV7 250 aa12.77□□□□□ -0.37
PRKDC-206ENST00000536429 HOOK3Q86VS8 718 aa12.77□□□□□ -0.37
PRKDC-206ENST00000536429 LRRC6Q86X45 466 aa12.77□□□□□ -0.37
PRKDC-206ENST00000536429 TBC1D21Q8IYX1 336 aa12.77□□□□□ -0.37
PRKDC-206ENST00000536429 OR5K2Q8NHB8 316 aa12.77□□□□□ -0.37
PRKDC-206ENST00000536429 CFAP61Q8NHU2 1237 aa12.77□□□□□ -0.37
PRKDC-206ENST00000536429 UBXN4Q92575 508 aa12.77□□□□□ -0.37
PRKDC-206ENST00000536429 CCNL2Q96S94 520 aaPredicted RBP12.77□□□□□ -0.37
PRKDC-206ENST00000536429 CD180Q99467 661 aa12.77□□□□□ -0.37
PRKDC-206ENST00000536429 SLC30A3Q99726 388 aa12.77□□□□□ -0.37
PRKDC-206ENST00000536429 TRIM31Q9BZY9 425 aa12.77□□□□□ -0.37
PRKDC-206ENST00000536429 KLHL25Q9H0H3 589 aa12.77□□□□□ -0.37
PRKDC-206ENST00000536429 TRIT1Q9H3H1 467 aaKnown RBP12.77□□□□□ -0.37
PRKDC-206ENST00000536429 FBXO6Q9NRD1 293 aaPredicted RBP12.77□□□□□ -0.37
PRKDC-206ENST00000536429 C20orf96Q9NUD7 363 aaPredicted RBP12.77□□□□□ -0.37
PRKDC-206ENST00000536429 SPHK1Q9NYA1 384 aa12.77□□□□□ -0.37
PRKDC-206ENST00000536429 SLC17A6Q9P2U8 582 aa12.77□□□□□ -0.37
PRKDC-206ENST00000536429 TSR3Q9UJK0 312 aaKnown RBP12.77□□□□□ -0.37
PRKDC-206ENST00000536429 NFS1Q9Y697 457 aa12.77□□□□□ -0.37
PRKDC-206ENST00000536429 SLC9B1P1A6NJY1 282 aa12.76□□□□□ -0.37
PRKDC-206ENST00000536429 CCDC188H7C350 402 aa12.76□□□□□ -0.37
PRKDC-206ENST00000536429 K7ENP7 123 aa12.76□□□□□ -0.37
PRKDC-206ENST00000536429 DLGAP3O95886 979 aa12.76□□□□□ -0.37
PRKDC-206ENST00000536429 APOA4P06727 396 aa12.76□□□□□ -0.37
PRKDC-206ENST00000536429 PVRP15151 417 aa12.76□□□□□ -0.37
PRKDC-206ENST00000536429 ST6GAL1P15907 406 aa12.76□□□□□ -0.37
PRKDC-206ENST00000536429 PRDX3P30048 256 aaKnown RBP12.76□□□□□ -0.37
PRKDC-206ENST00000536429 PEBP1P30086 187 aaKnown RBP12.76□□□□□ -0.37
PRKDC-206ENST00000536429 CASQ1P31415 396 aa12.76□□□□□ -0.37
PRKDC-206ENST00000536429 SLC1A2P43004 574 aa12.76□□□□□ -0.37
PRKDC-206ENST00000536429 ITGA8P53708 1063 aa12.76□□□□□ -0.37
PRKDC-206ENST00000536429 C2orf54Q08AI8 447 aa12.76□□□□□ -0.37
PRKDC-206ENST00000536429 VAC14Q08AM6 782 aa12.76□□□□□ -0.37
PRKDC-206ENST00000536429 PRKAA1Q13131 559 aa12.76□□□□□ -0.37
PRKDC-206ENST00000536429 GRB7Q14451 532 aa12.76□□□□□ -0.37
PRKDC-206ENST00000536429 CRYMQ14894 314 aa12.76□□□□□ -0.37
PRKDC-206ENST00000536429 LONRF1Q17RB8 773 aa12.76□□□□□ -0.37
PRKDC-206ENST00000536429 HSP90AA5PQ58FG0 334 aa12.76□□□□□ -0.37
PRKDC-206ENST00000536429 MANEAQ5SRI9 462 aa12.76□□□□□ -0.37
PRKDC-206ENST00000536429 RNF187Q5TA31 235 aaPredicted RBP12.76□□□□□ -0.37
PRKDC-206ENST00000536429 KIAA1614Q5VZ46 1190 aa12.76□□□□□ -0.37
PRKDC-206ENST00000536429 HIBCHQ6NVY1 386 aaPredicted RBP12.76□□□□□ -0.37
PRKDC-206ENST00000536429 ZNF549Q6P9A3 640 aa12.76□□□□□ -0.37
PRKDC-206ENST00000536429 INO80CQ6PI98 192 aaPredicted RBP12.76□□□□□ -0.37
PRKDC-206ENST00000536429 SYDE1Q6ZW31 735 aaPredicted RBP12.76□□□□□ -0.37
PRKDC-206ENST00000536429 GPR155Q7Z3F1 870 aa12.76□□□□□ -0.37
PRKDC-206ENST00000536429 D2HGDHQ8N465 521 aa12.76□□□□□ -0.37
PRKDC-206ENST00000536429 SIDT2Q8NBJ9 832 aaKnown RBP12.76□□□□□ -0.37
PRKDC-206ENST00000536429 FLVCR1-AS1Q8TAF5 88 aa12.76□□□□□ -0.37
PRKDC-206ENST00000536429 ASZ1Q8WWH4 475 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms