RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 IGHA2P01877 340 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 FABP1P07148 127 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 UNGP13051 313 aaPredicted RBP3.66□□□□□ -1.82
MCF2-210ENST00000536274 IMPDH1P20839 514 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 PTAFRP25105 342 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 PRDX5P30044 214 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 RPL9P32969 192 aaKnown RBP3.66□□□□□ -1.82
MCF2-210ENST00000536274 NSFP46459 744 aaKnown RBP3.66□□□□□ -1.82
MCF2-210ENST00000536274 ATP5OP48047 213 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 GRIA4P48058 902 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 RARRES1P49788 294 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 PLK1P53350 603 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 HERVK_113P63132 956 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 RPL6Q02878 288 aaKnown RBP3.66□□□□□ -1.82
MCF2-210ENST00000536274 RPA4Q13156 261 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 SMAD4Q13485 552 aaKnown RBP3.66□□□□□ -1.82
MCF2-210ENST00000536274 FASTKQ14296 549 aaKnown RBP3.66□□□□□ -1.82
MCF2-210ENST00000536274 TOMM20Q15388 145 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 PSMD5Q16401 504 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 KYAT1Q16773 422 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 FAM110CQ1W6H9 321 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 ALFQ53S48 1182 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 WDR44Q5JSH3 913 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 ODR4Q5SWX8 454 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 RBM20Q5T481 1227 aaKnown RBP3.66□□□□□ -1.82
MCF2-210ENST00000536274 C12orf60Q5U649 245 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 OTUD1Q5VV17 481 aaPredicted RBP3.66□□□□□ -1.82
MCF2-210ENST00000536274 RETSATQ6NUM9 610 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 CRTC1Q6UUV9 634 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 SUSD1Q6UWL2 747 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 LBX2Q6XYB7 198 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 CYS1Q717R9 158 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 ZSWIM9Q86XI8 627 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 KIAA0319LQ8IZA0 1049 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 PQLC3Q8N755 202 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 ZNF680Q8NEM1 530 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 PHOSPHO2Q8TCD6 241 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 SLC9A6Q92581 669 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 TMBIM1Q969X1 311 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 FBXO17Q96EF6 278 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 CENPNQ96H22 339 aaPredicted RBP3.66□□□□□ -1.82
MCF2-210ENST00000536274 UHRF1Q96T88 793 aaPredicted RBP3.66□□□□□ -1.82
MCF2-210ENST00000536274 AGAP2Q99490 1192 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 WDR77Q9BQA1 342 aaPredicted RBP3.66□□□□□ -1.82
MCF2-210ENST00000536274 CHCHD6Q9BRQ6 235 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 TBCDQ9BTW9 1192 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 MLPHQ9BV36 600 aaPredicted RBP3.66□□□□□ -1.82
MCF2-210ENST00000536274 ZNF416Q9BWM5 594 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 FAM49AQ9H0Q0 323 aaPredicted RBP3.66□□□□□ -1.82
MCF2-210ENST00000536274 UNC93B1Q9H1C4 597 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 UPF3AQ9H1J1 476 aaKnown RBP3.66□□□□□ -1.82
MCF2-210ENST00000536274 CAPN10Q9HC96 672 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 SPAG4Q9NPE6 437 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 GPATCH2LQ9NWQ4 482 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 MCUBQ9NWR8 336 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 MALT1Q9UDY8 824 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 OSGIN1Q9UJX0 560 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 INTS6Q9UL03 887 aaKnown RBP3.66□□□□□ -1.82
MCF2-210ENST00000536274 MGAT4BQ9UQ53 548 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 GINS2Q9Y248 185 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 PCDHB12Q9Y5F1 795 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 PTCH2Q9Y6C5 1203 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 STON1Q9Y6Q2 735 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 NFASCO94856 1347 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 EEF2KO00418 725 aaKnown RBP3.65□□□□□ -1.82
MCF2-210ENST00000536274 PRMT5O14744 637 aaPredicted RBP3.65□□□□□ -1.82
MCF2-210ENST00000536274 TNRC18O15417 2968 aaPredicted RBP3.65□□□□□ -1.82
MCF2-210ENST00000536274 SLC16A3O15427 465 aaKnown RBP3.65□□□□□ -1.82
MCF2-210ENST00000536274 SGCEO43556 437 aa3.65□□□□□ -1.82
MCF2-210ENST00000536274 ADAM11O75078 769 aa3.65□□□□□ -1.82
MCF2-210ENST00000536274 LRCH4O75427 683 aa3.65□□□□□ -1.82
MCF2-210ENST00000536274 POP7O75817 140 aaKnown RBP3.65□□□□□ -1.82
MCF2-210ENST00000536274 ITGAVP06756 1048 aa3.65□□□□□ -1.82
MCF2-210ENST00000536274 KLK3P07288 261 aaPredicted RBP3.65□□□□□ -1.82
MCF2-210ENST00000536274 PSAPP07602 524 aa3.65□□□□□ -1.82
MCF2-210ENST00000536274 SRCP12931 536 aa3.65□□□□□ -1.82
MCF2-210ENST00000536274 ZNF30P17039 623 aa3.65□□□□□ -1.82
MCF2-210ENST00000536274 NPR3P17342 541 aa3.65□□□□□ -1.82
MCF2-210ENST00000536274 IL10P22301 178 aa3.65□□□□□ -1.82
MCF2-210ENST00000536274 EPHA2P29317 976 aa3.65□□□□□ -1.82
MCF2-210ENST00000536274 GRK4P32298 578 aa3.65□□□□□ -1.82
MCF2-210ENST00000536274 CA5AP35218 305 aa3.65□□□□□ -1.82
MCF2-210ENST00000536274 GRK3P35626 688 aa3.65□□□□□ -1.82
MCF2-210ENST00000536274 GZMKP49863 264 aa3.65□□□□□ -1.82
MCF2-210ENST00000536274 CLCN4P51793 760 aa3.65□□□□□ -1.82
MCF2-210ENST00000536274 MCCD1P59942 119 aaPredicted RBP3.65□□□□□ -1.82
MCF2-210ENST00000536274 RGS1Q08116 209 aa3.65□□□□□ -1.82
MCF2-210ENST00000536274 KCNAB2Q13303 367 aa3.65□□□□□ -1.82
MCF2-210ENST00000536274 IL18R1Q13478 541 aa3.65□□□□□ -1.82
MCF2-210ENST00000536274 CUL2Q13617 745 aa3.65□□□□□ -1.82
MCF2-210ENST00000536274 RIN1Q13671 783 aa3.65□□□□□ -1.82
MCF2-210ENST00000536274 RAPSNQ13702 412 aa3.65□□□□□ -1.82
MCF2-210ENST00000536274 STARD3Q14849 445 aa3.65□□□□□ -1.82
MCF2-210ENST00000536274 TFDP3Q5H9I0 405 aa3.65□□□□□ -1.82
MCF2-210ENST00000536274 C9orf152Q5JTZ5 239 aa3.65□□□□□ -1.82
MCF2-210ENST00000536274 ZBTB41Q5SVQ8 909 aa3.65□□□□□ -1.82
MCF2-210ENST00000536274 INTS11Q5TA45 600 aaKnown RBP3.65□□□□□ -1.82
MCF2-210ENST00000536274 ARHGAP17Q68EM7 881 aa3.65□□□□□ -1.82
MCF2-210ENST00000536274 CLEC6AQ6EIG7 209 aa3.65□□□□□ -1.82
MCF2-210ENST00000536274 TREML4Q6UXN2 200 aa3.65□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms