RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 SPDYE1Q8NFV5 336 aaPredicted RBP13.2□□□□□ -0.3
RPAIN-205ENST00000536255 LKAAEAR1Q8TD35 194 aa13.2□□□□□ -0.3
RPAIN-205ENST00000536255 CCDC74BQ96LY2 380 aa13.2□□□□□ -0.3
RPAIN-205ENST00000536255 CMKLR1Q99788 373 aa13.2□□□□□ -0.3
RPAIN-205ENST00000536255 AARSD1Q9BTE6 412 aaKnown RBP13.2□□□□□ -0.3
RPAIN-205ENST00000536255 TBC1D10AQ9BXI6 508 aa13.2□□□□□ -0.3
RPAIN-205ENST00000536255 MVB12BQ9H7P6 319 aa13.2□□□□□ -0.3
RPAIN-205ENST00000536255 LRRC4CQ9HCJ2 640 aa13.2□□□□□ -0.3
RPAIN-205ENST00000536255 SLC40A1Q9NP59 571 aa13.2□□□□□ -0.3
RPAIN-205ENST00000536255 LATS2Q9NRM7 1088 aa13.2□□□□□ -0.3
RPAIN-205ENST00000536255 NFU1Q9UMS0 254 aa13.2□□□□□ -0.3
RPAIN-205ENST00000536255 LOXL2Q9Y4K0 774 aa13.2□□□□□ -0.3
RPAIN-205ENST00000536255 CFAP20Q9Y6A4 193 aaKnown RBP13.2□□□□□ -0.3
RPAIN-205ENST00000536255 CACNA1BQ00975 2339 aa13.2□□□□□ -0.3
RPAIN-205ENST00000536255 ACACAQ13085 2346 aa13.2□□□□□ -0.3
RPAIN-205ENST00000536255 PKD1L2Q7Z442 2459 aa13.19□□□□□ -0.3
RPAIN-205ENST00000536255 A0A087WV48 116 aa13.19□□□□□ -0.3
RPAIN-205ENST00000536255 CDRT15L2A8MXV6 281 aa13.19□□□□□ -0.3
RPAIN-205ENST00000536255 HGSO14964 777 aaPredicted RBP13.19□□□□□ -0.3
RPAIN-205ENST00000536255 KDM1AO60341 852 aa13.19□□□□□ -0.3
RPAIN-205ENST00000536255 NIPSNAP2O75323 286 aa13.19□□□□□ -0.3
RPAIN-205ENST00000536255 KRT37O76014 449 aa13.19□□□□□ -0.3
RPAIN-205ENST00000536255 JMJD7P0C870 316 aa13.19□□□□□ -0.3
RPAIN-205ENST00000536255 THRAP10827 490 aa13.19□□□□□ -0.3
RPAIN-205ENST00000536255 HGFP14210 728 aa13.19□□□□□ -0.3
RPAIN-205ENST00000536255 ATP5DP30049 168 aa13.19□□□□□ -0.3
RPAIN-205ENST00000536255 ECHS1P30084 290 aa13.19□□□□□ -0.3
RPAIN-205ENST00000536255 EIF2S3P41091 472 aaKnown RBP13.19□□□□□ -0.3
RPAIN-205ENST00000536255 SKIV2L2P42285 1042 aaKnown RBP13.19□□□□□ -0.3
RPAIN-205ENST00000536255 MAPK9P45984 424 aa13.19□□□□□ -0.3
RPAIN-205ENST00000536255 LIMK2P53671 638 aa13.19□□□□□ -0.3
RPAIN-205ENST00000536255 CSE1LP55060 971 aaKnown RBP13.19□□□□□ -0.3
RPAIN-205ENST00000536255 PCBP4P57723 403 aaKnown RBP13.19□□□□□ -0.3
RPAIN-205ENST00000536255 GPX6P59796 221 aa13.19□□□□□ -0.3
RPAIN-205ENST00000536255 NAB1Q13506 487 aa13.19□□□□□ -0.3
RPAIN-205ENST00000536255 TRA2AQ13595 282 aaKnown RBP eCLIP13.19□□□□□ -0.3
RPAIN-205ENST00000536255 C16orf72Q14CZ0 275 aa13.19□□□□□ -0.3
RPAIN-205ENST00000536255 PLCL1Q15111 1095 aa13.19□□□□□ -0.3
RPAIN-205ENST00000536255 TMEM71Q6P5X7 295 aa13.19□□□□□ -0.3
RPAIN-205ENST00000536255 KLHL35Q6PF15 583 aa13.19□□□□□ -0.3
RPAIN-205ENST00000536255 WDR74Q6RFH5 385 aaPredicted RBP13.19□□□□□ -0.3
RPAIN-205ENST00000536255 NAPRTQ6XQN6 538 aa13.19□□□□□ -0.3
RPAIN-205ENST00000536255 STRA8Q7Z7C7 330 aa13.19□□□□□ -0.3
RPAIN-205ENST00000536255 ZBTB2Q8N680 514 aa13.19□□□□□ -0.3
RPAIN-205ENST00000536255 TFGQ92734 400 aaPredicted RBP13.19□□□□□ -0.3
RPAIN-205ENST00000536255 FOPNLQ96NB1 174 aa13.19□□□□□ -0.3
RPAIN-205ENST00000536255 DCBLD2Q96PD2 775 aa13.19□□□□□ -0.3
RPAIN-205ENST00000536255 FERD3LQ96RJ6 166 aa13.19□□□□□ -0.3
RPAIN-205ENST00000536255 CPNE1Q99829 537 aa13.19□□□□□ -0.3
RPAIN-205ENST00000536255 TAS2R13Q9NYV9 303 aa13.19□□□□□ -0.3
RPAIN-205ENST00000536255 TMEM9Q9P0T7 183 aa13.19□□□□□ -0.3
RPAIN-205ENST00000536255 ASF1AQ9Y294 204 aa13.19□□□□□ -0.3
RPAIN-205ENST00000536255 LAMA5O15230 3695 aa13.19□□□□□ -0.3
RPAIN-205ENST00000536255 PRAMEF33A0A0G2JMD5 474 aa13.18□□□□□ -0.3
RPAIN-205ENST00000536255 FAM159BA6NKW6 160 aa13.18□□□□□ -0.3
RPAIN-205ENST00000536255 RRP8O43159 456 aaKnown RBP13.18□□□□□ -0.3
RPAIN-205ENST00000536255 AMD1P17707 334 aa13.18□□□□□ -0.3
RPAIN-205ENST00000536255 CD9P21926 228 aa13.18□□□□□ -0.3
RPAIN-205ENST00000536255 MPSTP25325 297 aa13.18□□□□□ -0.3
RPAIN-205ENST00000536255 ACADLP28330 430 aa13.18□□□□□ -0.3
RPAIN-205ENST00000536255 GABRB3P28472 473 aa13.18□□□□□ -0.3
RPAIN-205ENST00000536255 GPR18Q14330 331 aa13.18□□□□□ -0.3
RPAIN-205ENST00000536255 FAM45BPQ6NSW5 357 aa13.18□□□□□ -0.3
RPAIN-205ENST00000536255 ZNF549Q6P9A3 640 aa13.18□□□□□ -0.3
RPAIN-205ENST00000536255 CLEC14AQ86T13 490 aa13.18□□□□□ -0.3
RPAIN-205ENST00000536255 CTAGE3PQ8IX95 158 aa13.18□□□□□ -0.3
RPAIN-205ENST00000536255 TBC1D21Q8IYX1 336 aa13.18□□□□□ -0.3
RPAIN-205ENST00000536255 GPATCH11Q8N954 259 aa13.18□□□□□ -0.3
RPAIN-205ENST00000536255 RCBTB1Q8NDN9 531 aa13.18□□□□□ -0.3
RPAIN-205ENST00000536255 ZNF248Q8NDW4 579 aa13.18□□□□□ -0.3
RPAIN-205ENST00000536255 ACVR1CQ8NER5 493 aa13.18□□□□□ -0.3
RPAIN-205ENST00000536255 FAM45AQ8TCE6 357 aa13.18□□□□□ -0.3
RPAIN-205ENST00000536255 SKA2Q8WVK7 121 aaPredicted RBP13.18□□□□□ -0.3
RPAIN-205ENST00000536255 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.18□□□□□ -0.32e-7■■■■■ 32.7
RPAIN-205ENST00000536255 NCSTNQ92542 709 aa13.18□□□□□ -0.3
RPAIN-205ENST00000536255 INPP5DQ92835 1189 aa13.18□□□□□ -0.3
RPAIN-205ENST00000536255 FAM136AQ96C01 138 aa13.18□□□□□ -0.3
RPAIN-205ENST00000536255 TRIT1Q9H3H1 467 aaKnown RBP13.18□□□□□ -0.3
RPAIN-205ENST00000536255 KIR3DX1Q9H7L2 352 aa13.18□□□□□ -0.3
RPAIN-205ENST00000536255 AKAP7Q9P0M2 348 aaPredicted RBP13.18□□□□□ -0.3
RPAIN-205ENST00000536255 PDP2Q9P2J9 529 aa13.18□□□□□ -0.3
RPAIN-205ENST00000536255 PISDQ9UG56 409 aa13.18□□□□□ -0.3
RPAIN-205ENST00000536255 POLG2Q9UHN1 485 aa13.18□□□□□ -0.3
RPAIN-205ENST00000536255 TRMT6Q9UJA5 497 aaKnown RBP13.18□□□□□ -0.3
RPAIN-205ENST00000536255 CDYLQ9Y232 598 aa13.18□□□□□ -0.3
RPAIN-205ENST00000536255 DHRS7Q9Y394 339 aa13.18□□□□□ -0.3
RPAIN-205ENST00000536255 PCDHGA7Q9Y5G6 932 aa13.18□□□□□ -0.3
RPAIN-205ENST00000536255 UNC13CQ8NB66 2214 aa13.18□□□□□ -0.3
RPAIN-205ENST00000536255 AGRPO00253 132 aa13.17□□□□□ -0.3
RPAIN-205ENST00000536255 EIF3FO00303 357 aaPredicted RBP13.17□□□□□ -0.3
RPAIN-205ENST00000536255 UBXN7O94888 489 aa13.17□□□□□ -0.3
RPAIN-205ENST00000536255 F7P08709 466 aaPredicted RBP13.17□□□□□ -0.3
RPAIN-205ENST00000536255 CBSLP0DN79 551 aa13.17□□□□□ -0.3
RPAIN-205ENST00000536255 ENO3P13929 434 aaPredicted RBP13.17□□□□□ -0.3
RPAIN-205ENST00000536255 ITIH1P19827 911 aa13.17□□□□□ -0.3
RPAIN-205ENST00000536255 TNFRSF8P28908 595 aa13.17□□□□□ -0.3
RPAIN-205ENST00000536255 CBSP35520 551 aa13.17□□□□□ -0.3
RPAIN-205ENST00000536255 GP5P40197 560 aa13.17□□□□□ -0.3
RPAIN-205ENST00000536255 CLCN7P51798 805 aa13.17□□□□□ -0.3
RPAIN-205ENST00000536255 KYNUQ16719 465 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms