RNA–Protein interactions for RNA: ENST00000535297.1

TMEM258-203, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-203ENST00000535297 DNALI1O14645 258 aaPredicted RBP13.4□□□□□ -0.26
TMEM258-203ENST00000535297 KPNA5O15131 536 aa13.4□□□□□ -0.26
TMEM258-203ENST00000535297 ATXN7O15265 892 aaPredicted RBP13.4□□□□□ -0.26
TMEM258-203ENST00000535297 EFSO43281 561 aa13.4□□□□□ -0.26
TMEM258-203ENST00000535297 USP1O94782 785 aa13.4□□□□□ -0.26
TMEM258-203ENST00000535297 RPN2P04844 631 aa13.4□□□□□ -0.26
TMEM258-203ENST00000535297 MAP4P27816 1152 aaKnown RBP13.4□□□□□ -0.26
TMEM258-203ENST00000535297 AOAHP28039 575 aa13.4□□□□□ -0.26
TMEM258-203ENST00000535297 SHMT2P34897 504 aa13.4□□□□□ -0.26
TMEM258-203ENST00000535297 CSE1LP55060 971 aaKnown RBP13.4□□□□□ -0.26
TMEM258-203ENST00000535297 ADARP55265 1226 aaKnown RBP13.4□□□□□ -0.26
TMEM258-203ENST00000535297 EIF3BP55884 814 aaKnown RBP13.4□□□□□ -0.26
TMEM258-203ENST00000535297 HSD11B2P80365 405 aa13.4□□□□□ -0.26
TMEM258-203ENST00000535297 ACY1Q03154 408 aa13.4□□□□□ -0.26
TMEM258-203ENST00000535297 HSPA14Q0VDF9 509 aa13.4□□□□□ -0.26
TMEM258-203ENST00000535297 PRKG2Q13237 762 aa13.4□□□□□ -0.26
TMEM258-203ENST00000535297 SRSF6Q13247 344 aaKnown RBP13.4□□□□□ -0.26
TMEM258-203ENST00000535297 TUBB3Q13509 450 aa13.4□□□□□ -0.26
TMEM258-203ENST00000535297 DHX34Q14147 1143 aaKnown RBP13.4□□□□□ -0.26
TMEM258-203ENST00000535297 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.4□□□□□ -0.26
TMEM258-203ENST00000535297 ANKRD20A4Q4UJ75 823 aa13.4□□□□□ -0.26
TMEM258-203ENST00000535297 SYDE1Q6ZW31 735 aaPredicted RBP13.4□□□□□ -0.26
TMEM258-203ENST00000535297 PCGF5Q86SE9 256 aa13.4□□□□□ -0.26
TMEM258-203ENST00000535297 TMEM135Q86UB9 458 aa13.4□□□□□ -0.26
TMEM258-203ENST00000535297 HOOK3Q86VS8 718 aa13.4□□□□□ -0.26
TMEM258-203ENST00000535297 BPHLQ86WA6 291 aaPredicted RBP13.4□□□□□ -0.26
TMEM258-203ENST00000535297 AMIGO1Q86WK6 493 aa13.4□□□□□ -0.26
TMEM258-203ENST00000535297 PPP1R3BQ86XI6 285 aa13.4□□□□□ -0.26
TMEM258-203ENST00000535297 KRT222Q8N1A0 295 aa13.4□□□□□ -0.26
TMEM258-203ENST00000535297 D2HGDHQ8N465 521 aa13.4□□□□□ -0.26
TMEM258-203ENST00000535297 LSM14AQ8ND56 463 aaKnown RBP13.4□□□□□ -0.26
TMEM258-203ENST00000535297 LPGAT1Q92604 370 aa13.4□□□□□ -0.26
TMEM258-203ENST00000535297 ULBP3Q9BZM4 244 aa13.4□□□□□ -0.26
TMEM258-203ENST00000535297 PDE7BQ9NP56 450 aa13.4□□□□□ -0.26
TMEM258-203ENST00000535297 C1GALT1Q9NS00 363 aa13.4□□□□□ -0.26
TMEM258-203ENST00000535297 KCND1Q9NSA2 647 aa13.4□□□□□ -0.26
TMEM258-203ENST00000535297 RNF14Q9UBS8 474 aa13.4□□□□□ -0.26
TMEM258-203ENST00000535297 ICKQ9UPZ9 632 aa13.4□□□□□ -0.26
TMEM258-203ENST00000535297 BTRCQ9Y297 605 aa13.4□□□□□ -0.26
TMEM258-203ENST00000535297 VPS9D1Q9Y2B5 631 aa13.4□□□□□ -0.26
TMEM258-203ENST00000535297 PCDHGA4Q9Y5G9 962 aa13.4□□□□□ -0.26
TMEM258-203ENST00000535297 RPS6KL1Q9Y6S9 549 aa13.4□□□□□ -0.26
TMEM258-203ENST00000535297 ZCWPW2A0A1B0GU75 182 aa13.39□□□□□ -0.27
TMEM258-203ENST00000535297 C2orf74A8MZ97 194 aa13.39□□□□□ -0.27
TMEM258-203ENST00000535297 GOLGA8KD6RF30 607 aa13.39□□□□□ -0.27
TMEM258-203ENST00000535297 GOLGA8TH3BQL2 631 aa13.39□□□□□ -0.27
TMEM258-203ENST00000535297 CCDC188H7C350 402 aa13.39□□□□□ -0.27
TMEM258-203ENST00000535297 ERVH48-1M5A8F1 160 aa13.39□□□□□ -0.27
TMEM258-203ENST00000535297 BTN3A3O00478 584 aa13.39□□□□□ -0.27
TMEM258-203ENST00000535297 SLCO2B1O94956 709 aa13.39□□□□□ -0.27
TMEM258-203ENST00000535297 ESR1P03372 595 aa13.39□□□□□ -0.27
TMEM258-203ENST00000535297 EBLN1P0CF75 366 aa13.39□□□□□ -0.27
TMEM258-203ENST00000535297 FOLR1P15328 257 aa13.39□□□□□ -0.27
TMEM258-203ENST00000535297 CDH3P22223 829 aa13.39□□□□□ -0.27
TMEM258-203ENST00000535297 PAFAH1B1P43034 410 aa13.39□□□□□ -0.27
TMEM258-203ENST00000535297 PTGIRP43119 386 aa13.39□□□□□ -0.27
TMEM258-203ENST00000535297 ABHD18Q0P651 414 aa13.39□□□□□ -0.27
TMEM258-203ENST00000535297 SOWAHCQ53LP3 525 aaPredicted RBP13.39□□□□□ -0.27
TMEM258-203ENST00000535297 CTSL3PQ5NE16 218 aa13.39□□□□□ -0.27
TMEM258-203ENST00000535297 TMTC4Q5T4D3 741 aa13.39□□□□□ -0.27
TMEM258-203ENST00000535297 NEPROQ6NW34 567 aa13.39□□□□□ -0.27
TMEM258-203ENST00000535297 UNC5DQ6UXZ4 953 aa13.39□□□□□ -0.27
TMEM258-203ENST00000535297 CILP2Q8IUL8 1156 aa13.39□□□□□ -0.27
TMEM258-203ENST00000535297 RASGRP3Q8IV61 690 aa13.39□□□□□ -0.27
TMEM258-203ENST00000535297 LMNTD2Q8IXW0 634 aa13.39□□□□□ -0.27
TMEM258-203ENST00000535297 ADGRF3Q8IZF5 1079 aa13.39□□□□□ -0.27
TMEM258-203ENST00000535297 ESX1Q8N693 406 aa13.39□□□□□ -0.27
TMEM258-203ENST00000535297 ZSCAN1Q8NBB4 408 aa13.39□□□□□ -0.27
TMEM258-203ENST00000535297 OR8K5Q8NH50 307 aa13.39□□□□□ -0.27
TMEM258-203ENST00000535297 WBP1Q96G27 269 aa13.39□□□□□ -0.27
TMEM258-203ENST00000535297 SIGLEC10Q96LC7 697 aa13.39□□□□□ -0.27
TMEM258-203ENST00000535297 BIRC8Q96P09 236 aa13.39□□□□□ -0.27
TMEM258-203ENST00000535297 FCRL4Q96PJ5 515 aa13.39□□□□□ -0.27
TMEM258-203ENST00000535297 TRIM56Q9BRZ2 755 aaKnown RBP13.39□□□□□ -0.27
TMEM258-203ENST00000535297 PITPNM3Q9BZ71 974 aa13.39□□□□□ -0.27
TMEM258-203ENST00000535297 INTS10Q9NVR2 710 aaKnown RBP13.39□□□□□ -0.27
TMEM258-203ENST00000535297 SOHLH2Q9NX45 425 aa13.39□□□□□ -0.27
TMEM258-203ENST00000535297 RARRES3Q9UL19 164 aa13.39□□□□□ -0.27
TMEM258-203ENST00000535297 MAD1L1Q9Y6D9 718 aa13.39□□□□□ -0.27
TMEM258-203ENST00000535297 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.39□□□□□ -0.27
TMEM258-203ENST00000535297 SPAG6O75602 509 aa13.38□□□□□ -0.27
TMEM258-203ENST00000535297 WT1P19544 449 aaPredicted RBP13.38□□□□□ -0.27
TMEM258-203ENST00000535297 PRDX3P30048 256 aaKnown RBP13.38□□□□□ -0.27
TMEM258-203ENST00000535297 TUBB4BP68371 445 aa13.38□□□□□ -0.27
TMEM258-203ENST00000535297 DR1Q01658 176 aa13.38□□□□□ -0.27
TMEM258-203ENST00000535297 THOC5Q13769 683 aaKnown RBP13.38□□□□□ -0.27
TMEM258-203ENST00000535297 TUBB2AQ13885 445 aa13.38□□□□□ -0.27
TMEM258-203ENST00000535297 KCNAB1Q14722 419 aa13.38□□□□□ -0.27
TMEM258-203ENST00000535297 LONRF1Q17RB8 773 aa13.38□□□□□ -0.27
TMEM258-203ENST00000535297 PLEKHS1Q5SXH7 462 aa13.38□□□□□ -0.27
TMEM258-203ENST00000535297 IZUMO3Q5VZ72 239 aa13.38□□□□□ -0.27
TMEM258-203ENST00000535297 ZNF470Q6ECI4 717 aa13.38□□□□□ -0.27
TMEM258-203ENST00000535297 CENPUQ71F23 418 aa13.38□□□□□ -0.27
TMEM258-203ENST00000535297 OTOAQ7RTW8 1153 aa13.38□□□□□ -0.27
TMEM258-203ENST00000535297 TIPARPQ7Z3E1 657 aaKnown RBP13.38□□□□□ -0.27
TMEM258-203ENST00000535297 VRK3Q8IV63 474 aa13.38□□□□□ -0.27
TMEM258-203ENST00000535297 DCUN1D3Q8IWE4 304 aa13.38□□□□□ -0.27
TMEM258-203ENST00000535297 KLHL7Q8IXQ5 586 aa13.38□□□□□ -0.27
TMEM258-203ENST00000535297 AGGF1Q8N302 714 aaeCLIP13.38□□□□□ -0.27
TMEM258-203ENST00000535297 GSDMBQ8TAX9 411 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms