RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 ZNF282Q9UDV7 671 aaPredicted RBP17.88■□□□□ 0.45
SFSWAP-203ENST00000535236 CA12O43570 354 aa17.87■□□□□ 0.45
SFSWAP-203ENST00000535236 PDHA2P29803 388 aa17.87■□□□□ 0.45
SFSWAP-203ENST00000535236 OC90Q02509 493 aaPredicted RBP17.87■□□□□ 0.45
SFSWAP-203ENST00000535236 LAPTM4BQ86VI4 370 aa17.87■□□□□ 0.45
SFSWAP-203ENST00000535236 CCDC36Q8IYA8 594 aa17.87■□□□□ 0.45
SFSWAP-203ENST00000535236 OR10A6Q8NH74 314 aa17.87■□□□□ 0.45
SFSWAP-203ENST00000535236 TFAP2BQ92481 460 aa17.87■□□□□ 0.45
SFSWAP-203ENST00000535236 SPOCK2Q92563 424 aa17.87■□□□□ 0.45
SFSWAP-203ENST00000535236 MIPEPQ99797 713 aa17.87■□□□□ 0.45
SFSWAP-203ENST00000535236 RBM47A0AV96 593 aaKnown RBP17.87■□□□□ 0.45
SFSWAP-203ENST00000535236 B4DGG1 531 aa17.87■□□□□ 0.45
SFSWAP-203ENST00000535236 RENP00797 406 aa17.87■□□□□ 0.45
SFSWAP-203ENST00000535236 GDI1P31150 447 aa17.87■□□□□ 0.45
SFSWAP-203ENST00000535236 ABHD13Q7L211 337 aa17.87■□□□□ 0.45
SFSWAP-203ENST00000535236 TNFRSF25Q93038 417 aa17.87■□□□□ 0.45
SFSWAP-203ENST00000535236 ANXA2P2A6NMY6 339 aa17.87■□□□□ 0.45
SFSWAP-203ENST00000535236 KMOO15229 486 aa17.87■□□□□ 0.45
SFSWAP-203ENST00000535236 ANXA2P07355 339 aaKnown RBP17.87■□□□□ 0.45
SFSWAP-203ENST00000535236 EFNA1P20827 205 aaPredicted RBP17.87■□□□□ 0.45
SFSWAP-203ENST00000535236 NDUFS1P28331 727 aa17.87■□□□□ 0.45
SFSWAP-203ENST00000535236 MLLT3P42568 568 aaPredicted RBP17.87■□□□□ 0.45
SFSWAP-203ENST00000535236 ECT2LQ008S8 904 aa17.87■□□□□ 0.45
SFSWAP-203ENST00000535236 MAPK14Q16539 360 aa17.87■□□□□ 0.45
SFSWAP-203ENST00000535236 CLNKQ7Z7G1 428 aa17.87■□□□□ 0.45
SFSWAP-203ENST00000535236 RASGRP3Q8IV61 690 aa17.87■□□□□ 0.45
SFSWAP-203ENST00000535236 FAM110BQ8TC76 370 aa17.87■□□□□ 0.45
SFSWAP-203ENST00000535236 GADD45GO95257 159 aa17.87■□□□□ 0.45
SFSWAP-203ENST00000535236 SERPINA3P01011 423 aa17.87■□□□□ 0.45
SFSWAP-203ENST00000535236 TSPAN5P62079 268 aa17.87■□□□□ 0.45
SFSWAP-203ENST00000535236 ZNF460Q14592 562 aa17.87■□□□□ 0.45
SFSWAP-203ENST00000535236 AMIGO1Q86WK6 493 aa17.87■□□□□ 0.45
SFSWAP-203ENST00000535236 OR10H4Q8NGA5 316 aa17.87■□□□□ 0.45
SFSWAP-203ENST00000535236 UNC93B1Q9H1C4 597 aa17.87■□□□□ 0.45
SFSWAP-203ENST00000535236 OR51V1Q9H2C8 321 aa17.87■□□□□ 0.45
SFSWAP-203ENST00000535236 MKKSQ9NPJ1 570 aaPredicted RBP17.87■□□□□ 0.45
SFSWAP-203ENST00000535236 COL20A1Q9P218 1284 aa17.87■□□□□ 0.45
SFSWAP-203ENST00000535236 TLR6Q9Y2C9 796 aa17.87■□□□□ 0.45
SFSWAP-203ENST00000535236 ARL5AQ9Y689 179 aa17.87■□□□□ 0.45
SFSWAP-203ENST00000535236 TCRBV7S2A1N4TA0A589 114 aa17.86■□□□□ 0.45
SFSWAP-203ENST00000535236 YJEFN3A6XGL0 299 aa17.86■□□□□ 0.45
SFSWAP-203ENST00000535236 GPIP06744 558 aa17.86■□□□□ 0.45
SFSWAP-203ENST00000535236 ACP5P13686 325 aa17.86■□□□□ 0.45
SFSWAP-203ENST00000535236 POU2F1P14859 743 aa17.86■□□□□ 0.45
SFSWAP-203ENST00000535236 RPS9P46781 194 aaKnown RBP17.86■□□□□ 0.45
SFSWAP-203ENST00000535236 VLDLRP98155 873 aa17.86■□□□□ 0.45
SFSWAP-203ENST00000535236 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.86■□□□□ 0.45
SFSWAP-203ENST00000535236 RELTQ969Z4 430 aa17.86■□□□□ 0.45
SFSWAP-203ENST00000535236 ROPN1LQ96C74 230 aa17.86■□□□□ 0.45
SFSWAP-203ENST00000535236 COQ8BQ96D53 544 aa17.86■□□□□ 0.45
SFSWAP-203ENST00000535236 RIMBP3CA6NJZ7 1639 aa17.86■□□□□ 0.45
SFSWAP-203ENST00000535236 RIMBP3BA6NNM3 1639 aa17.86■□□□□ 0.45
SFSWAP-203ENST00000535236 RIMBP3Q9UFD9 1639 aa17.86■□□□□ 0.45
SFSWAP-203ENST00000535236 GABRDO14764 452 aa17.86■□□□□ 0.45
SFSWAP-203ENST00000535236 CD2P06729 351 aa17.86■□□□□ 0.45
SFSWAP-203ENST00000535236 PTX3P26022 381 aaPredicted RBP17.86■□□□□ 0.45
SFSWAP-203ENST00000535236 CCR8P51685 355 aa17.86■□□□□ 0.45
SFSWAP-203ENST00000535236 SVOPLQ8N434 492 aa17.86■□□□□ 0.45
SFSWAP-203ENST00000535236 RBM15BQ8NDT2 890 aaKnown RBP17.86■□□□□ 0.45
SFSWAP-203ENST00000535236 CHCHD6Q9BRQ6 235 aa17.86■□□□□ 0.45
SFSWAP-203ENST00000535236 REXO2Q9Y3B8 237 aaKnown RBP17.86■□□□□ 0.45
SFSWAP-203ENST00000535236 PCDHGB5Q9Y5G0 923 aa17.86■□□□□ 0.45
SFSWAP-203ENST00000535236 CXCR6O00574 342 aa17.86■□□□□ 0.45
SFSWAP-203ENST00000535236 NPHS1O60500 1241 aa17.86■□□□□ 0.45
SFSWAP-203ENST00000535236 PRAMEF12O95522 483 aa17.86■□□□□ 0.45
SFSWAP-203ENST00000535236 PRKCHP24723 683 aa17.86■□□□□ 0.45
SFSWAP-203ENST00000535236 SLC7A1P30825 629 aa17.86■□□□□ 0.45
SFSWAP-203ENST00000535236 CRISP3P54108 245 aa17.86■□□□□ 0.45
SFSWAP-203ENST00000535236 SLC10A6Q3KNW5 377 aa17.86■□□□□ 0.45
SFSWAP-203ENST00000535236 ARSIQ5FYB1 569 aa17.86■□□□□ 0.45
SFSWAP-203ENST00000535236 PTF1AQ7RTS3 328 aa17.86■□□□□ 0.45
SFSWAP-203ENST00000535236 PIWIL1Q96J94 861 aaKnown RBP17.86■□□□□ 0.45
SFSWAP-203ENST00000535236 SERINC1Q9NRX5 453 aa17.86■□□□□ 0.45
SFSWAP-203ENST00000535236 TBC1D24Q9ULP9 559 aa17.86■□□□□ 0.45
SFSWAP-203ENST00000535236 CLCA3PQ9Y6N3 262 aa17.86■□□□□ 0.45
SFSWAP-203ENST00000535236 MPIP34949 423 aa17.86■□□□□ 0.45
SFSWAP-203ENST00000535236 SEMG2Q02383 582 aa17.86■□□□□ 0.45
SFSWAP-203ENST00000535236 FASTKD3Q14CZ7 662 aaKnown RBP17.86■□□□□ 0.45
SFSWAP-203ENST00000535236 MFSD5Q6N075 450 aa17.86■□□□□ 0.45
SFSWAP-203ENST00000535236 GDPD4Q6W3E5 623 aa17.86■□□□□ 0.45
SFSWAP-203ENST00000535236 ECHDC2Q86YB7 292 aa17.86■□□□□ 0.45
SFSWAP-203ENST00000535236 OR2L3Q8NG85 312 aa17.86■□□□□ 0.45
SFSWAP-203ENST00000535236 DUSP26Q9BV47 211 aa17.86■□□□□ 0.45
SFSWAP-203ENST00000535236 ADAP2Q9NPF8 381 aa17.86■□□□□ 0.45
SFSWAP-203ENST00000535236 EIF2B3Q9NR50 452 aaKnown RBP17.86■□□□□ 0.45
SFSWAP-203ENST00000535236 CNTN6Q9UQ52 1028 aa17.86■□□□□ 0.45
SFSWAP-203ENST00000535236 FAM149AA5PLN7 773 aa17.85■□□□□ 0.45
SFSWAP-203ENST00000535236 ELOA3DA6NLF2 546 aaPredicted RBP17.85■□□□□ 0.45
SFSWAP-203ENST00000535236 C9IYK1 514 aa17.85■□□□□ 0.45
SFSWAP-203ENST00000535236 GNB5O14775 395 aa17.85■□□□□ 0.45
SFSWAP-203ENST00000535236 MT-ND1P03886 318 aa17.85■□□□□ 0.45
SFSWAP-203ENST00000535236 PRDX6P30041 224 aa17.85■□□□□ 0.45
SFSWAP-203ENST00000535236 GJA9P57773 515 aa17.85■□□□□ 0.45
SFSWAP-203ENST00000535236 ELOA3BQ3SY89 546 aa17.85■□□□□ 0.45
SFSWAP-203ENST00000535236 TIGD5Q53EQ6 642 aa17.85■□□□□ 0.45
SFSWAP-203ENST00000535236 QSOX2Q6ZRP7 698 aa17.85■□□□□ 0.45
SFSWAP-203ENST00000535236 MPP5Q8N3R9 675 aa17.85■□□□□ 0.45
SFSWAP-203ENST00000535236 GLB1L3Q8NCI6 653 aaPredicted RBP17.85■□□□□ 0.45
SFSWAP-203ENST00000535236 ELOA3Q8NG57 546 aa17.85■□□□□ 0.45
SFSWAP-203ENST00000535236 CLEC4DQ8WXI8 215 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms