RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	ANKEF1	Q9NU02	776 aa		4.54	□□□□□ -1.68
ECHDC1-223	ENST00000534442	KIAA1456	Q9P272	454 aa		4.54	□□□□□ -1.68
ECHDC1-223	ENST00000534442	ARPP21	Q9UBL0	812 aa	Predicted RBP	4.54	□□□□□ -1.68
ECHDC1-223	ENST00000534442	SLCO3A1	Q9UIG8	710 aa		4.54	□□□□□ -1.68
ECHDC1-223	ENST00000534442	CORO1C	Q9ULV4	474 aa	Predicted RBP	4.54	□□□□□ -1.68
ECHDC1-223	ENST00000534442	MAFF	Q9ULX9	164 aa		4.54	□□□□□ -1.68
ECHDC1-223	ENST00000534442	DHDH	Q9UQ10	334 aa		4.54	□□□□□ -1.68
ECHDC1-223	ENST00000534442	KCNE2	Q9Y6J6	123 aa		4.54	□□□□□ -1.68
ECHDC1-223	ENST00000534442	CAPN7	Q9Y6W3	813 aa		4.54	□□□□□ -1.68
ECHDC1-223	ENST00000534442	ZGRF1	Q86YA3	2104 aa		4.54	□□□□□ -1.68
ECHDC1-223	ENST00000534442	FANCI	Q9NVI1	1328 aa		4.53	□□□□□ -1.68
ECHDC1-223	ENST00000534442	MYH4	Q9Y623	1939 aa		4.53	□□□□□ -1.68
ECHDC1-223	ENST00000534442	LIPT2	A6NK58	231 aa		4.53	□□□□□ -1.68
ECHDC1-223	ENST00000534442	LAD1	O00515	517 aa		4.53	□□□□□ -1.68
ECHDC1-223	ENST00000534442	ADAM12	O43184	909 aa		4.53	□□□□□ -1.68
ECHDC1-223	ENST00000534442	PAPSS1	O43252	624 aa	Predicted RBP	4.53	□□□□□ -1.68
ECHDC1-223	ENST00000534442	SEC31A	O94979	1220 aa	Known RBP	4.53	□□□□□ -1.68
ECHDC1-223	ENST00000534442	CCNDBP1	O95273	360 aa		4.53	□□□□□ -1.68
ECHDC1-223	ENST00000534442	THEGL	P0DJG4	465 aa		4.53	□□□□□ -1.68
ECHDC1-223	ENST00000534442	CKMT2	P17540	419 aa		4.53	□□□□□ -1.68
ECHDC1-223	ENST00000534442	TNFRSF1A	P19438	455 aa		4.53	□□□□□ -1.68
ECHDC1-223	ENST00000534442	EDN2	P20800	178 aa		4.53	□□□□□ -1.68
ECHDC1-223	ENST00000534442	FMO4	P31512	558 aa		4.53	□□□□□ -1.68
ECHDC1-223	ENST00000534442	SKIV2L2	P42285	1042 aa	Known RBP	4.53	□□□□□ -1.68
ECHDC1-223	ENST00000534442	QARS	P47897	775 aa	Known RBP	4.53	□□□□□ -1.68
ECHDC1-223	ENST00000534442	CYP2J2	P51589	502 aa		4.53	□□□□□ -1.68
ECHDC1-223	ENST00000534442	OLR1	P78380	273 aa		4.53	□□□□□ -1.68
ECHDC1-223	ENST00000534442	TLE4	Q04727	773 aa		4.53	□□□□□ -1.68
ECHDC1-223	ENST00000534442	RUNX3	Q13761	415 aa		4.53	□□□□□ -1.68
ECHDC1-223	ENST00000534442	PKP1	Q13835	747 aa		4.53	□□□□□ -1.68
ECHDC1-223	ENST00000534442	MED22	Q15528	200 aa		4.53	□□□□□ -1.68
ECHDC1-223	ENST00000534442	ME3	Q16798	604 aa		4.53	□□□□□ -1.68
ECHDC1-223	ENST00000534442	USP41	Q3LFD5	358 aa		4.53	□□□□□ -1.68
ECHDC1-223	ENST00000534442	LCE4A	Q5TA78	99 aa		4.53	□□□□□ -1.68
ECHDC1-223	ENST00000534442	TTI2	Q6NXR4	508 aa		4.53	□□□□□ -1.68
ECHDC1-223	ENST00000534442	CYP20A1	Q6UW02	462 aa		4.53	□□□□□ -1.68
ECHDC1-223	ENST00000534442	IL20RB	Q6UXL0	311 aa		4.53	□□□□□ -1.68
ECHDC1-223	ENST00000534442	ENOSF1	Q7L5Y1	443 aa		4.53	□□□□□ -1.68
ECHDC1-223	ENST00000534442	WDTC1	Q8N5D0	677 aa		4.53	□□□□□ -1.68
ECHDC1-223	ENST00000534442	ALLC	Q8N6M5	410 aa		4.53	□□□□□ -1.68
ECHDC1-223	ENST00000534442	C11orf65	Q8NCR3	313 aa		4.53	□□□□□ -1.68
ECHDC1-223	ENST00000534442	DNAAF1	Q8NEP3	725 aa		4.53	□□□□□ -1.68
ECHDC1-223	ENST00000534442	CADM4	Q8NFZ8	388 aa		4.53	□□□□□ -1.68
ECHDC1-223	ENST00000534442	NOC3L	Q8WTT2	800 aa	Known RBP	4.53	□□□□□ -1.68
ECHDC1-223	ENST00000534442	IGFBPL1	Q8WX77	278 aa		4.53	□□□□□ -1.68
ECHDC1-223	ENST00000534442	RSPH1	Q8WYR4	309 aa		4.53	□□□□□ -1.68
ECHDC1-223	ENST00000534442	INTS12	Q96CB8	462 aa	Known RBP	4.53	□□□□□ -1.68
ECHDC1-223	ENST00000534442	TEFM	Q96QE5	360 aa	Known RBP	4.53	□□□□□ -1.68
ECHDC1-223	ENST00000534442	IWS1	Q96ST2	819 aa		4.53	□□□□□ -1.68
ECHDC1-223	ENST00000534442	POLR3C	Q9BUI4	534 aa	Predicted RBP	4.53	□□□□□ -1.68
ECHDC1-223	ENST00000534442	EBF3	Q9H4W6	596 aa		4.53	□□□□□ -1.68
ECHDC1-223	ENST00000534442	SCPEP1	Q9HB40	452 aa		4.53	□□□□□ -1.68
ECHDC1-223	ENST00000534442	MCCC2	Q9HCC0	563 aa		4.53	□□□□□ -1.68
ECHDC1-223	ENST00000534442	GRHL1	Q9NZI5	618 aa		4.53	□□□□□ -1.68
ECHDC1-223	ENST00000534442	COPG2	Q9UBF2	871 aa		4.53	□□□□□ -1.68
ECHDC1-223	ENST00000534442	LIMA1	Q9UHB6	759 aa	Known RBP	4.53	□□□□□ -1.68
ECHDC1-223	ENST00000534442	INTS6	Q9UL03	887 aa	Known RBP	4.53	□□□□□ -1.68
ECHDC1-223	ENST00000534442	MYRF	Q9Y2G1	1151 aa		4.53	□□□□□ -1.68
ECHDC1-223	ENST00000534442	LYVE1	Q9Y5Y7	322 aa		4.53	□□□□□ -1.68
ECHDC1-223	ENST00000534442	HS3ST3A1	Q9Y663	406 aa		4.53	□□□□□ -1.68
ECHDC1-223	ENST00000534442	ZAN	Q9Y493	2812 aa		4.53	□□□□□ -1.68
ECHDC1-223	ENST00000534442	MYO5A	Q9Y4I1	1855 aa	Known RBP	4.52	□□□□□ -1.69
ECHDC1-223	ENST00000534442	FAM237B	A0A1B0GVD1	139 aa		4.52	□□□□□ -1.69
ECHDC1-223	ENST00000534442		A0A1W2PQF6	199 aa		4.52	□□□□□ -1.69
ECHDC1-223	ENST00000534442	CBY3	A6NI87	242 aa		4.52	□□□□□ -1.69
ECHDC1-223	ENST00000534442	PTGES3L	E9PB15	166 aa		4.52	□□□□□ -1.69
ECHDC1-223	ENST00000534442	SGK1	O00141	431 aa		4.52	□□□□□ -1.69
ECHDC1-223	ENST00000534442	VILL	O15195	856 aa		4.52	□□□□□ -1.69
ECHDC1-223	ENST00000534442	PHF1	O43189	567 aa	Predicted RBP	4.52	□□□□□ -1.69
ECHDC1-223	ENST00000534442	LIAS	O43766	372 aa		4.52	□□□□□ -1.69
ECHDC1-223	ENST00000534442	NEURL1	O76050	574 aa		4.52	□□□□□ -1.69
ECHDC1-223	ENST00000534442	NFATC1	O95644	943 aa		4.52	□□□□□ -1.69
ECHDC1-223	ENST00000534442	LIPC	P11150	499 aa		4.52	□□□□□ -1.69
ECHDC1-223	ENST00000534442	POR	P16435	677 aa	Predicted RBP	4.52	□□□□□ -1.69
ECHDC1-223	ENST00000534442	NFKBIA	P25963	317 aa		4.52	□□□□□ -1.69
ECHDC1-223	ENST00000534442	OR1G1	P47890	313 aa		4.52	□□□□□ -1.69
ECHDC1-223	ENST00000534442	PTH2R	P49190	550 aa		4.52	□□□□□ -1.69
ECHDC1-223	ENST00000534442	BLK	P51451	505 aa		4.52	□□□□□ -1.69
ECHDC1-223	ENST00000534442	ARSF	P54793	590 aa		4.52	□□□□□ -1.69
ECHDC1-223	ENST00000534442	NLRP5	P59047	1200 aa		4.52	□□□□□ -1.69
ECHDC1-223	ENST00000534442	SP4	Q02446	784 aa		4.52	□□□□□ -1.69
ECHDC1-223	ENST00000534442	GALNT3	Q14435	633 aa		4.52	□□□□□ -1.69
ECHDC1-223	ENST00000534442	PLCB4	Q15147	1175 aa		4.52	□□□□□ -1.69
ECHDC1-223	ENST00000534442	CYP4A22	Q5TCH4	519 aa		4.52	□□□□□ -1.69
ECHDC1-223	ENST00000534442	SERTAD4-AS1	Q5TG53	156 aa		4.52	□□□□□ -1.69
ECHDC1-223	ENST00000534442	TMEM268	Q5VZI3	342 aa		4.52	□□□□□ -1.69
ECHDC1-223	ENST00000534442	ZKSCAN2	Q63HK3	967 aa		4.52	□□□□□ -1.69
ECHDC1-223	ENST00000534442	SLC46A3	Q7Z3Q1	461 aa		4.52	□□□□□ -1.69
ECHDC1-223	ENST00000534442	GPR65	Q8IYL9	337 aa		4.52	□□□□□ -1.69
ECHDC1-223	ENST00000534442	TMEM116	Q8NCL8	245 aa		4.52	□□□□□ -1.69
ECHDC1-223	ENST00000534442	CCDC26	Q8TAB7	109 aa		4.52	□□□□□ -1.69
ECHDC1-223	ENST00000534442	FAR1	Q8WVX9	515 aa		4.52	□□□□□ -1.69
ECHDC1-223	ENST00000534442	CD101	Q93033	1021 aa		4.52	□□□□□ -1.69
ECHDC1-223	ENST00000534442	EXOC4	Q96A65	974 aa		4.52	□□□□□ -1.69
ECHDC1-223	ENST00000534442	ATXN7L3B	Q96GX2	97 aa		4.52	□□□□□ -1.69
ECHDC1-223	ENST00000534442	WDFY2	Q96P53	400 aa		4.52	□□□□□ -1.69
ECHDC1-223	ENST00000534442	SYNC	Q9H7C4	482 aa		4.52	□□□□□ -1.69
ECHDC1-223	ENST00000534442	MOV10	Q9HCE1	1003 aa	Known RBP	4.52	□□□□□ -1.69
ECHDC1-223	ENST00000534442	CD93	Q9NPY3	652 aa		4.52	□□□□□ -1.69
ECHDC1-223	ENST00000534442	PLSCR4	Q9NRQ2	329 aa		4.52	□□□□□ -1.69

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