RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 ZDHHC12Q96GR4 267 aa9.34□□□□□ -0.91
SSBP3-215ENST00000533946 ZNF514Q96K75 400 aaPredicted RBP9.34□□□□□ -0.91
SSBP3-215ENST00000533946 TRAPPC9Q96Q05 1148 aa9.34□□□□□ -0.91
SSBP3-215ENST00000533946 OR2A14Q96R47 310 aa9.34□□□□□ -0.91
SSBP3-215ENST00000533946 RANBP9Q96S59 729 aa9.34□□□□□ -0.91
SSBP3-215ENST00000533946 FERMT1Q9BQL6 677 aa9.34□□□□□ -0.91
SSBP3-215ENST00000533946 MESP1Q9BRJ9 268 aa9.34□□□□□ -0.91
SSBP3-215ENST00000533946 TRIM55Q9BYV6 548 aa9.34□□□□□ -0.91
SSBP3-215ENST00000533946 B3GNT4Q9C0J1 378 aa9.34□□□□□ -0.91
SSBP3-215ENST00000533946 SPRTNQ9H040 489 aaPredicted RBP9.34□□□□□ -0.91
SSBP3-215ENST00000533946 RAB33BQ9H082 229 aa9.34□□□□□ -0.91
SSBP3-215ENST00000533946 P2RY12Q9H244 342 aa9.34□□□□□ -0.91
SSBP3-215ENST00000533946 SRMSQ9H3Y6 488 aa9.34□□□□□ -0.91
SSBP3-215ENST00000533946 ZNF71Q9NQZ8 489 aaPredicted RBP9.34□□□□□ -0.91
SSBP3-215ENST00000533946 FGF21Q9NSA1 209 aa9.34□□□□□ -0.91
SSBP3-215ENST00000533946 PAK5Q9P286 719 aa9.34□□□□□ -0.91
SSBP3-215ENST00000533946 SLC17A6Q9P2U8 582 aa9.34□□□□□ -0.91
SSBP3-215ENST00000533946 FEZ2Q9UHY8 353 aaPredicted RBP9.34□□□□□ -0.91
SSBP3-215ENST00000533946 POMT2Q9UKY4 750 aa9.34□□□□□ -0.91
SSBP3-215ENST00000533946 PYCARDQ9ULZ3 195 aa9.34□□□□□ -0.91
SSBP3-215ENST00000533946 TDRKHQ9Y2W6 561 aaKnown RBP9.34□□□□□ -0.91
SSBP3-215ENST00000533946 HECTD1Q9ULT8 2610 aa9.34□□□□□ -0.91
SSBP3-215ENST00000533946 C17orf113A0A1B0GUU1 675 aa9.33□□□□□ -0.92
SSBP3-215ENST00000533946 UBA6A0AVT1 1052 aaPredicted RBP9.33□□□□□ -0.92
SSBP3-215ENST00000533946 HEATR9A2RTY3 570 aa9.33□□□□□ -0.92
SSBP3-215ENST00000533946 TLCD2A6NGC4 264 aa9.33□□□□□ -0.92
SSBP3-215ENST00000533946 EIF4E1BA6NMX2 242 aaKnown RBP9.33□□□□□ -0.92
SSBP3-215ENST00000533946 H3BMH7 237 aa9.33□□□□□ -0.92
SSBP3-215ENST00000533946 TK2O00142 265 aa9.33□□□□□ -0.92
SSBP3-215ENST00000533946 CD3EAPO15446 510 aaKnown RBP9.33□□□□□ -0.92
SSBP3-215ENST00000533946 PSMD3O43242 534 aa9.33□□□□□ -0.92
SSBP3-215ENST00000533946 ZW10O43264 779 aa9.33□□□□□ -0.92
SSBP3-215ENST00000533946 CNOT3O75175 753 aaKnown RBP9.33□□□□□ -0.92
SSBP3-215ENST00000533946 NIPSNAP2O75323 286 aa9.33□□□□□ -0.92
SSBP3-215ENST00000533946 VAPBO95292 243 aa9.33□□□□□ -0.92
SSBP3-215ENST00000533946 MED26O95402 600 aa9.33□□□□□ -0.92
SSBP3-215ENST00000533946 KRT14P02533 472 aa9.33□□□□□ -0.92
SSBP3-215ENST00000533946 UGT2B7P16662 529 aa9.33□□□□□ -0.92
SSBP3-215ENST00000533946 CD82P27701 267 aa9.33□□□□□ -0.92
SSBP3-215ENST00000533946 PSMB5P28074 263 aa9.33□□□□□ -0.92
SSBP3-215ENST00000533946 BDKRB1P46663 353 aa9.33□□□□□ -0.92
SSBP3-215ENST00000533946 GABRA4P48169 554 aa9.33□□□□□ -0.92
SSBP3-215ENST00000533946 RAB15P59190 212 aa9.33□□□□□ -0.92
SSBP3-215ENST00000533946 PDE1BQ01064 536 aa9.33□□□□□ -0.92
SSBP3-215ENST00000533946 HSPA14Q0VDF9 509 aa9.33□□□□□ -0.92
SSBP3-215ENST00000533946 CDC20Q12834 499 aa9.33□□□□□ -0.92
SSBP3-215ENST00000533946 GPS1Q13098 491 aa9.33□□□□□ -0.92
SSBP3-215ENST00000533946 SKIDA1Q1XH10 827 aa9.33□□□□□ -0.92
SSBP3-215ENST00000533946 PTCHD3Q3KNS1 767 aa9.33□□□□□ -0.92
SSBP3-215ENST00000533946 MSS51Q4VC12 460 aa9.33□□□□□ -0.92
SSBP3-215ENST00000533946 PLEKHS1Q5SXH7 462 aa9.33□□□□□ -0.92
SSBP3-215ENST00000533946 CPZQ66K79 652 aa9.33□□□□□ -0.92
SSBP3-215ENST00000533946 PACS1Q6VY07 963 aa9.33□□□□□ -0.92
SSBP3-215ENST00000533946 GSTA5Q7RTV2 222 aa9.33□□□□□ -0.92
SSBP3-215ENST00000533946 LINC00523Q86TU6 105 aa9.33□□□□□ -0.92
SSBP3-215ENST00000533946 IGDCC3Q8IVU1 814 aa9.33□□□□□ -0.92
SSBP3-215ENST00000533946 C17orf53Q8N3J3 647 aaPredicted RBP9.33□□□□□ -0.92
SSBP3-215ENST00000533946 RASGEF1CQ8N431 466 aa9.33□□□□□ -0.92
SSBP3-215ENST00000533946 CCDC112Q8NEF3 446 aa9.33□□□□□ -0.92
SSBP3-215ENST00000533946 ACVR1CQ8NER5 493 aa9.33□□□□□ -0.92
SSBP3-215ENST00000533946 SLC45A3Q96JT2 553 aa9.33□□□□□ -0.92
SSBP3-215ENST00000533946 BIRC8Q96P09 236 aa9.33□□□□□ -0.92
SSBP3-215ENST00000533946 TWSG1Q9GZX9 223 aa9.33□□□□□ -0.92
SSBP3-215ENST00000533946 CHST8Q9H2A9 424 aa9.33□□□□□ -0.92
SSBP3-215ENST00000533946 EPB41L1Q9H4G0 881 aa9.33□□□□□ -0.92
SSBP3-215ENST00000533946 PLAC1Q9HBJ0 212 aa9.33□□□□□ -0.92
SSBP3-215ENST00000533946 ACTR10Q9NZ32 417 aa9.33□□□□□ -0.92
SSBP3-215ENST00000533946 STOX2Q9P2F5 926 aaPredicted RBP9.33□□□□□ -0.92
SSBP3-215ENST00000533946 GOLGA6L3A6NEY3 463 aa9.32□□□□□ -0.92
SSBP3-215ENST00000533946 TMEM150CB9EJG8 249 aa9.32□□□□□ -0.92
SSBP3-215ENST00000533946 CFAP99D6REC4 459 aa9.32□□□□□ -0.92
SSBP3-215ENST00000533946 GPC4O75487 556 aa9.32□□□□□ -0.92
SSBP3-215ENST00000533946 CHRM5P08912 532 aaPredicted RBP9.32□□□□□ -0.92
SSBP3-215ENST00000533946 CBSLP0DN79 551 aa9.32□□□□□ -0.92
SSBP3-215ENST00000533946 RALBP11234 206 aa9.32□□□□□ -0.92
SSBP3-215ENST00000533946 TCN2P20062 427 aa9.32□□□□□ -0.92
SSBP3-215ENST00000533946 CDH3P22223 829 aa9.32□□□□□ -0.92
SSBP3-215ENST00000533946 MAP4P27816 1152 aaKnown RBP9.32□□□□□ -0.92
SSBP3-215ENST00000533946 AOAHP28039 575 aa9.32□□□□□ -0.92
SSBP3-215ENST00000533946 FMO4P31512 558 aa9.32□□□□□ -0.92
SSBP3-215ENST00000533946 CBSP35520 551 aa9.32□□□□□ -0.92
SSBP3-215ENST00000533946 COILP38432 576 aaPredicted RBP9.32□□□□□ -0.92
SSBP3-215ENST00000533946 GRIA3P42263 894 aa9.32□□□□□ -0.92
SSBP3-215ENST00000533946 NSG1P42857 185 aa9.32□□□□□ -0.92
SSBP3-215ENST00000533946 ATP1A2P50993 1020 aa9.32□□□□□ -0.92
SSBP3-215ENST00000533946 POLE2P56282 527 aa9.32□□□□□ -0.92
SSBP3-215ENST00000533946 HSD11B2P80365 405 aa9.32□□□□□ -0.92
SSBP3-215ENST00000533946 ABHD18Q0P651 414 aa9.32□□□□□ -0.92
SSBP3-215ENST00000533946 KRT33BQ14525 404 aa9.32□□□□□ -0.92
SSBP3-215ENST00000533946 PCID2Q5JVF3 399 aa9.32□□□□□ -0.92
SSBP3-215ENST00000533946 HP1BP3Q5SSJ5 553 aaPredicted RBP9.32□□□□□ -0.92
SSBP3-215ENST00000533946 ZNF549Q6P9A3 640 aa9.32□□□□□ -0.92
SSBP3-215ENST00000533946 AFTPHQ6ULP2 937 aa9.32□□□□□ -0.92
SSBP3-215ENST00000533946 CENPUQ71F23 418 aa9.32□□□□□ -0.92
SSBP3-215ENST00000533946 AMIGO1Q86WK6 493 aa9.32□□□□□ -0.92
SSBP3-215ENST00000533946 OOSP2Q86WS3 158 aa9.32□□□□□ -0.92
SSBP3-215ENST00000533946 DENND6AQ8IWF6 608 aa9.32□□□□□ -0.92
SSBP3-215ENST00000533946 RBM12BQ8IXT5 1001 aaKnown RBP9.32□□□□□ -0.92
SSBP3-215ENST00000533946 TRIM58Q8NG06 486 aa9.32□□□□□ -0.92
SSBP3-215ENST00000533946 DENND1AQ8TEH3 1009 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms