RNA–Protein interactions for RNA: ENST00000533222.5

CD44-236, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-236ENST00000533222 DUSP22Q9NRW4 184 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 MED9Q9NWA0 146 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 NCDNQ9UBB6 729 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 MORF4L1Q9UBU8 362 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 APOBEC3BQ9UH17 382 aaKnown RBP5.42□□□□□ -1.54
CD44-236ENST00000533222 ENPP5Q9UJA9 477 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 DBNLQ9UJU6 430 aaKnown RBP5.42□□□□□ -1.54
CD44-236ENST00000533222 ZNF221Q9UK13 617 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 AMFRQ9UKV5 643 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 CRYL1Q9Y2S2 319 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 REXO2Q9Y3B8 237 aaKnown RBP5.42□□□□□ -1.54
CD44-236ENST00000533222 RNF215Q9Y6U7 377 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 PBRM1Q86U86 1689 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 CAMSAP1Q5T5Y3 1602 aa5.41□□□□□ -1.54
CD44-236ENST00000533222 ABCA6Q8N139 1617 aa5.41□□□□□ -1.54
CD44-236ENST00000533222 PTPRKQ15262 1439 aa5.41□□□□□ -1.54
CD44-236ENST00000533222 MYOM1P52179 1685 aa5.41□□□□□ -1.54
CD44-236ENST00000533222 CRYBG1Q9Y4K1 1723 aa5.41□□□□□ -1.54
CD44-236ENST00000533222 TTC26A0AVF1 554 aa5.41□□□□□ -1.54
CD44-236ENST00000533222 SMIM23A6NLE4 172 aa5.41□□□□□ -1.54
CD44-236ENST00000533222 H0YIN7 160 aa5.41□□□□□ -1.54
CD44-236ENST00000533222 I3L4J1 428 aa5.41□□□□□ -1.54
CD44-236ENST00000533222 WNT10BO00744 389 aa5.41□□□□□ -1.54
CD44-236ENST00000533222 DNALI1O14645 258 aaPredicted RBP5.41□□□□□ -1.54
CD44-236ENST00000533222 ITGB1BP1O14713 200 aa5.41□□□□□ -1.54
CD44-236ENST00000533222 ZBTB5O15062 677 aa5.41□□□□□ -1.54
CD44-236ENST00000533222 GPR42O15529 346 aa5.41□□□□□ -1.54
CD44-236ENST00000533222 DAPK3O43293 454 aa5.41□□□□□ -1.54
CD44-236ENST00000533222 UGDHO60701 494 aa5.41□□□□□ -1.54
CD44-236ENST00000533222 ENTPD5O75356 428 aa5.41□□□□□ -1.54
CD44-236ENST00000533222 SPAG7O75391 227 aa5.41□□□□□ -1.54
CD44-236ENST00000533222 RFPL2O75678 378 aa5.41□□□□□ -1.54
CD44-236ENST00000533222 NOL4O94818 638 aa5.41□□□□□ -1.54
CD44-236ENST00000533222 RAB3DO95716 219 aa5.41□□□□□ -1.54
CD44-236ENST00000533222 NDST3O95803 873 aa5.41□□□□□ -1.54
CD44-236ENST00000533222 IFNA10P01566 189 aa5.41□□□□□ -1.54
CD44-236ENST00000533222 IL1BP01584 269 aa5.41□□□□□ -1.54
CD44-236ENST00000533222 APOA1P02647 267 aa5.41□□□□□ -1.54
CD44-236ENST00000533222 CSF2P04141 144 aa5.41□□□□□ -1.54
CD44-236ENST00000533222 SLC3A2P08195 630 aaKnown RBP5.41□□□□□ -1.54
CD44-236ENST00000533222 PLEKP08567 350 aaPredicted RBP5.41□□□□□ -1.54
CD44-236ENST00000533222 ADRB1P08588 477 aa5.41□□□□□ -1.54
CD44-236ENST00000533222 ACAA1P09110 424 aaPredicted RBP5.41□□□□□ -1.54
CD44-236ENST00000533222 FBP1P09467 338 aa5.41□□□□□ -1.54
CD44-236ENST00000533222 OR4E1P0C645 316 aa5.41□□□□□ -1.54
CD44-236ENST00000533222 IQCF3P0C7M6 154 aa5.41□□□□□ -1.54
CD44-236ENST00000533222 VSIG10L2P0DP72 767 aa5.41□□□□□ -1.54
CD44-236ENST00000533222 CYP19A1P11511 503 aaPredicted RBP5.41□□□□□ -1.54
CD44-236ENST00000533222 DPEP1P16444 411 aa5.41□□□□□ -1.54
CD44-236ENST00000533222 WARSP23381 471 aaKnown RBP5.41□□□□□ -1.54
CD44-236ENST00000533222 CRHR1P34998 444 aa5.41□□□□□ -1.54
CD44-236ENST00000533222 PCGF2P35227 344 aa5.41□□□□□ -1.54
CD44-236ENST00000533222 RORAP35398 523 aa5.41□□□□□ -1.54
CD44-236ENST00000533222 FEN1P39748 380 aaKnown RBP5.41□□□□□ -1.54
CD44-236ENST00000533222 CD79BP40259 229 aa5.41□□□□□ -1.54
CD44-236ENST00000533222 SLC1A3P43003 542 aa5.41□□□□□ -1.54
CD44-236ENST00000533222 KIR2DL3P43628 341 aa5.41□□□□□ -1.54
CD44-236ENST00000533222 GPR143P51810 404 aa5.41□□□□□ -1.54
CD44-236ENST00000533222 BMXP51813 675 aa5.41□□□□□ -1.54
CD44-236ENST00000533222 PGDP52209 483 aa5.41□□□□□ -1.54
CD44-236ENST00000533222 GBX2P52951 348 aaPredicted RBP5.41□□□□□ -1.54
CD44-236ENST00000533222 SLC5A3P53794 718 aa5.41□□□□□ -1.54
CD44-236ENST00000533222 CD81P60033 236 aa5.41□□□□□ -1.54
CD44-236ENST00000533222 MAGOHP61326 146 aaKnown RBP5.41□□□□□ -1.54
CD44-236ENST00000533222 RBP5P82980 135 aa5.41□□□□□ -1.54
CD44-236ENST00000533222 MPP1Q00013 466 aa5.41□□□□□ -1.54
CD44-236ENST00000533222 ZNF91Q05481 1191 aa5.41□□□□□ -1.54
CD44-236ENST00000533222 STX4Q12846 297 aa5.41□□□□□ -1.54
CD44-236ENST00000533222 LMAN2Q12907 356 aa5.41□□□□□ -1.54
CD44-236ENST00000533222 ABRQ12979 859 aa5.41□□□□□ -1.54
CD44-236ENST00000533222 MALLQ13021 153 aa5.41□□□□□ -1.54
CD44-236ENST00000533222 STX5Q13190 355 aa5.41□□□□□ -1.54
CD44-236ENST00000533222 SNAPC2Q13487 334 aa5.41□□□□□ -1.54
CD44-236ENST00000533222 FLOT2Q14254 428 aa5.41□□□□□ -1.54
CD44-236ENST00000533222 ZNF273Q14593 569 aa5.41□□□□□ -1.54
CD44-236ENST00000533222 SMCO1Q147U7 214 aa5.41□□□□□ -1.54
CD44-236ENST00000533222 KARSQ15046 597 aaKnown RBP5.41□□□□□ -1.54
CD44-236ENST00000533222 MAN2A1Q16706 1144 aa5.41□□□□□ -1.54
CD44-236ENST00000533222 ZACNQ401N2 412 aa5.41□□□□□ -1.54
CD44-236ENST00000533222 LCE3BQ5TA77 95 aa5.41□□□□□ -1.54
CD44-236ENST00000533222 OGFRL1Q5TC84 451 aaPredicted RBP5.41□□□□□ -1.54
CD44-236ENST00000533222 CYP20A1Q6UW02 462 aa5.41□□□□□ -1.54
CD44-236ENST00000533222 LAYNQ6UX15 382 aa5.41□□□□□ -1.54
CD44-236ENST00000533222 TFAP2EQ6VUC0 442 aa5.41□□□□□ -1.54
CD44-236ENST00000533222 NPSR1Q6W5P4 371 aa5.41□□□□□ -1.54
CD44-236ENST00000533222 ZNF782Q6ZMW2 699 aaPredicted RBP5.41□□□□□ -1.54
CD44-236ENST00000533222 MSANTD1Q6ZTZ1 278 aa5.41□□□□□ -1.54
CD44-236ENST00000533222 USP45Q70EL2 814 aa5.41□□□□□ -1.54
CD44-236ENST00000533222 MAEAQ7L5Y9 396 aa5.41□□□□□ -1.54
CD44-236ENST00000533222 RRM2BQ7LG56 351 aa5.41□□□□□ -1.54
CD44-236ENST00000533222 ADGRE4PQ86SQ3 457 aa5.41□□□□□ -1.54
CD44-236ENST00000533222 DHDDSQ86SQ9 333 aa5.41□□□□□ -1.54
CD44-236ENST00000533222 TMPRSS6Q8IU80 811 aa5.41□□□□□ -1.54
CD44-236ENST00000533222 TPH2Q8IWU9 490 aa5.41□□□□□ -1.54
CD44-236ENST00000533222 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.41□□□□□ -1.54
CD44-236ENST00000533222 SNX31Q8N9S9 440 aa5.41□□□□□ -1.54
CD44-236ENST00000533222 MCUQ8NE86 351 aa5.41□□□□□ -1.54
CD44-236ENST00000533222 BEST2Q8NFU1 509 aa5.41□□□□□ -1.54
CD44-236ENST00000533222 UBA3Q8TBC4 463 aa5.41□□□□□ -1.54
CD44-236ENST00000533222 DTX3LQ8TDB6 740 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms