RNA–Protein interactions for RNA: ENST00000533089.5

TGFBR3-210, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 6,455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-210ENST00000533089 THAP6Q8TBB0 222 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 MECRQ9BV79 373 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 ASPNQ9BXN1 380 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 SLC7A8Q9UHI5 535 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 MTF2Q9Y483 593 aaPredicted RBP6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 AP1M2Q9Y6Q5 423 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 CIB4A0PJX0 185 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 USP2O75604 605 aaPredicted RBP6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 RFPL1O75677 317 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 RECQL4O94761 1208 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 TOXO94900 526 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 SPATA31D3P0C874 917 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 CNTFP26441 200 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 TLX1P31314 330 aaPredicted RBP6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 CREMQ03060 361 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 ANKRD54Q6NXT1 300 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 MTFR2Q6P444 385 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 SPATA31D4Q6ZUB0 917 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 GPR142Q7Z601 462 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 LHFPL3Q86UP9 236 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 SYT12Q8IV01 421 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 LSMEM1Q8N8F7 131 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 APBB2Q92870 758 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 RERGQ96A58 199 aaPredicted RBP6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 KIAA1143Q96AT1 154 aaPredicted RBP6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 SGK3Q96BR1 496 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 SGTBQ96EQ0 304 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 CPNE2Q96FN4 548 aaPredicted RBP6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 SCRN2Q96FV2 425 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 RGCCQ9H4X1 137 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 CPNE5Q9HCH3 593 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 TMEM45AQ9NWC5 275 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 C5orf51A6NDU8 294 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 LRRC72A6NJI9 287 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 F8W036 122 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 SMAD9O15198 467 aaKnown RBP6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 LYPLA1O75608 230 aaPredicted RBP6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 SCO1O75880 301 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 LYPLA2O95372 231 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 GNRH1P01148 92 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 SNRPB2P08579 225 aaKnown RBP6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 UBL4AP11441 157 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 FAUP35544 74 aaKnown RBP6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 BLOC1S1P78537 153 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 MFSD7Q6UXD7 560 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 SPATA6LQ8N4H0 392 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 TERB2Q8NHR7 220 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 DNAJB14Q8TBM8 379 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 DENND1AQ8TEH3 1009 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 GTPBP3Q969Y2 492 aaKnown RBP6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 SENP8Q96LD8 212 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 C12orf66Q96MD2 445 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 SLC30A2Q9BRI3 323 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 IL1RAPQ9NPH3 570 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 SLAMF7Q9NQ25 335 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 COMMD3Q9UBI1 195 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 DNMT3LQ9UJW3 386 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 MGAT4AQ9UM21 535 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 COG5Q9UP83 839 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 OR10H1Q9Y4A9 318 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 SERPINB7O75635 380 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 PROSCO94903 275 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 LCKP06239 509 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 FABP1P07148 127 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 OMPP47874 163 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 MLLT6P55198 1093 aaPredicted RBP6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 CDH11P55287 796 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 SNRPD1P62314 119 aaKnown RBP6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 SIM2Q14190 667 aaPredicted RBP6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 ALG11Q2TAA5 492 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 TCEAL5Q5H9L2 206 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 ZNF621Q6ZSS3 439 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 OR2T34Q8NGX1 318 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 OR2T3Q8NH03 318 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 CEP76Q8TAP6 659 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 C7orf43Q8WVR3 580 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 HYLS1Q96M11 299 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 PRRG4Q9BZD6 226 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 COL22A1Q8NFW1 1626 aaPredicted RBP6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 ACOX3O15254 700 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 LCMT2O60294 686 aaKnown RBP6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 NR2C1P13056 603 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 DDCP20711 480 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 UBA1P22314 1058 aaKnown RBP6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 S100PP25815 95 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 RPL14P50914 215 aaKnown RBP6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 MRPS6P82932 125 aaKnown RBP6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 FLI1Q01543 452 aaPredicted RBP6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 TREML2Q5T2D2 321 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 ZNF697Q5TEC3 545 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 DESI1Q6ICB0 168 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 SV2AQ7L0J3 742 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 CHPFQ8IZ52 775 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 OR5T2Q8NGG2 359 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 OR56A4Q8NGH8 313 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 LILRB1Q8NHL6 650 aaPredicted RBP6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 ACTRT2Q8TDY3 377 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 PEX13Q92968 403 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 LPPQ93052 612 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms